prot_E-siliculosus-1a_F_contig10283.240.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10283.240.1
Unique Nameprot_E-siliculosus-1a_F_contig10283.240.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length233
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.190e-130
Identity = 190/233 (81.55%), Postives = 193/233 (82.83%), Query Frame = 0
Query:    1 AIRAQLSRIGDAHSRQGGSDGGDKXXXXXXXXXXXXXXXXXXXXKNIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCFDSERYENVLRAEAATLGELIEVEGRCK 233
            A+ A+LSRI DAHSRQGGSD GDK                    K IYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALA DLALCATFLELD            VAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDG DSC DSERYEN+LRAEAATLGELIEVE RCK
Sbjct:   70 AVLAELSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQKKKIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALAGDLALCATFLELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCK 302          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 187 bits (476), Expect = 7.840e-55
Identity = 91/188 (48.40%), Postives = 116/188 (61.70%), Query Frame = 0
Query:   47 IYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDR-WQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCFDSERYENVLRAEAATLGELIEVEGRCK 233
            + E+ELAL+    KRNPK Y AWHH +W LERG D +GG +A  R+L LC  FL LD            V E+ GLSA E+F FTT+KI +NFSNYSAFH+RSK+LP + E  G      L+  EL++ H A FTEP DQS WWYH FL+ WA +        ++Y  +L+ E   + EL+ VE RCK
Sbjct:   99 VVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCK 286          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: A4SAM5_OSTLU (Geranylgeranyl transferase type-2 subunit alpha n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4SAM5_OSTLU)

HSP 1 Score: 128 bits (322), Expect = 1.300e-32
Identity = 70/191 (36.65%), Postives = 99/191 (51.83%), Query Frame = 0
Query:   48 YEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLG-----GRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCFDSERYENVLRAEAATLGELIEVEGRCK 233
            + +EL +S   ++ NPKSYP+W+H KW L R ++  G      R  L R+  LCA  L  D            VAE++G    EE  +T  KI+ NFSNYSA+H+RS +L    E  G    + L  E +L  +A +TEP DQS W YH     W    A +  D++  E++L  E  T  E+ ++E  CK
Sbjct:   51 WSDELRVSETALRNNPKSYPSWYHRKWVLRRMIEAFGTEEGKARETLEREAKLCADMLNADDRNFHCWAYRRFVAEKLGRGVDEELQYTLTKIENNFSNYSAWHYRSAIL----ESRGAADAETLEREFELASNAFYTEPEDQSAWMYHR----WLTSRARAIEDAKDRESLLERERQTCREVSDLEPTCK 233          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: A0A7R9U2X8_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.970e-32
Identity = 82/188 (43.62%), Postives = 105/188 (55.85%), Query Frame = 0
Query:   46 NIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRS-ALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCFDSERYENVLRAEAATLGELIEVEGRC 232
            ++ +EEL +S + +KR PKSYPAW+H KW L+R   L  GR   L  +           XXXXXXXXXX  VA   G++  E +++T D++  NFSNYSAFH RS++L  + E  G D+   L  ELD       T P DQS WWY+ FLL    D AD     E    +LR E   L EL+EVE  C
Sbjct:  102 DVAQEELVMSAEALKRQPKSYPAWYHRKWILDR---LESGRERTLQSEXXXXXXXXXXXXXXXXXXXXXRYVAHLAGVTPEENYEYTEDRLNANFSNYSAFHERSRILASLAEY-GEDKISTLQQELDFVQQITVTAPDDQSAWWYYRFLLAAVTDDAD--IPIEEKLRLLRQEVGRLNELVEVELEC 283          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: UPI000C78249F (geranylgeranyl transferase type-2 subunit alpha-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78249F)

HSP 1 Score: 129 bits (325), Expect = 1.740e-31
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 0
Query:   51 ELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCF 206
            EL L+  C+  NPKSY AWHH  W LE  ++        +R+LALC  FL+LD            VA++ G+  ++E +FT +KI++NFSNYSA+H+RSK+LP +  +    +   +  ELDL  +A FT+PAD S W+YH +LL    +G    F
Sbjct:  117 ELDLTQQCLIANPKSYGAWHHRTWCLEHMIN-----PDWSRELALCRKFLKLDERNFHCWDYRKWVADKAGVKPQQELEFTLEKIEENFSNYSAWHYRSKLLPLLNPDTSSIQEDQVHKELDLVQNAAFTDPADSSAWFYHTWLLGQESEGLKIVF 267          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: A0A0M0JE27_9EUKA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE27_9EUKA)

HSP 1 Score: 125 bits (315), Expect = 9.280e-31
Identity = 72/189 (38.10%), Postives = 100/189 (52.91%), Query Frame = 0
Query:   51 ELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALAR--DLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDR----WQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCFDSERYENVLRAEAATLGELIEVEGRCK 233
            E AL+ +C+  NPKSYP W+H +W L      L G        +L L A  L LD            V    G++A  E  FTT KI+ NFSNYSA+H+RSK+LP +   AG +       +L +EL+L  +A FT P D S W+YH +L+     GA +      +E ++RAE   + EL+E+E  CK
Sbjct:   90 EFALTQECLGINPKSYPVWYHREWVL------LWGECEWQWPVELKLTAKLLALDDRNFHCWTYRRNVVRVAGVTAEAELAFTTTKIQANFSNYSAWHYRSKLLPAVHASAGAEGAAQLGAVLRNELELVRNAFFTAPEDSSAWFYHRWLIAQLAPGAAAALPPAEFEALVRAELQMVDELLELEPECK 272          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: UPI000644DC6F (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DC6F)

HSP 1 Score: 124 bits (312), Expect = 9.580e-31
Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 0
Query:   45 KNIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCFDSERYENVLRAEAATLGELIEVEGRCK 233
            + +Y  E+    +CI+R  KSY  W+H KW     + +   +    R+L LC+  L+LD            V E+ GL   +E+ +TT KI+QNFSNYSA+H RS ++P M  E     ++ L +E +L  +A+FTEP DQS W YH +L+     G         Y+ V  AE   + ELIE+E  CK
Sbjct:   86 QTLYAAEMKFIEECIQRFTKSYWVWYHRKW-----ISVRQDKCDWERELKLCSKLLDLDLRNFHCWSYRRFVGEKSGLPLEKEYAYTTTKIEQNFSNYSAWHQRSALIPLMNTEP-QQLFEKLKEEFELVRNAVFTEPKDQSSWIYHKWLV-----GTMKAIPGCDYKEVFNAEVEAINELIEIEPDCK 263          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: A0A7S4DKH2_HETAK (Geranylgeranyl transferase type-2 subunit alpha (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKH2_HETAK)

HSP 1 Score: 121 bits (303), Expect = 1.130e-30
Identity = 68/160 (42.50%), Postives = 87/160 (54.37%), Query Frame = 0
Query:   51 ELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEA-----------GHD-RWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA 198
            EL L+ D I RNPKSYPAWH  +W +   LD       L+++L LCA FL+ D            +  +MG +  EE +F T KI +NFSNYSA+H+R+++LP +               G D R  LL  ELD     +FTEP DQSVWWY   LL WA
Sbjct:   32 ELQLTQDGIGRNPKSYPAWHQRQWLIIH-LD----SPDLSQELDLCALFLQRDGRNFHCWNYRQFIVNKMGRTPAEEMEFLTSKIDENFSNYSAWHYRARLLPGLAHSVAKGGAGGPSPGGEDPRVTLLRRELDHVEQIVFTEPDDQSVWWYLRHLLAWA 186          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: D0N0T5_PHYIT (Geranylgeranyl transferase type-2 subunit alpha n=15 Tax=Phytophthora TaxID=4783 RepID=D0N0T5_PHYIT)

HSP 1 Score: 123 bits (308), Expect = 5.380e-30
Identity = 70/183 (38.25%), Postives = 98/183 (53.55%), Query Frame = 0
Query:   51 ELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGADSCFDSERYENVLRAEAATLGELIEVEGRCK 233
            EL L++D ++RNPKSY AW   +W ++RGL        L  ++ LC   L LD            V +  G+S  E+  FTT KI+QNFSNYSA H RS  LP  +         +L DE+ L   A+FTEP DQS W+Y+ +LLT   +  +S   +E     L+++   L EL+E+E   K
Sbjct:  108 ELKLTLDALQRNPKSYSAWFQRQWIIDRGL------GDLKMEIGLCDKLLNLDERNFHCWNYRRHVCKLAGVSKAEQLAFTTQKIEQNFSNYSALHHRSITLPEPLSA------DVLFDEIGLVQQAVFTEPDDQSAWFYYRWLLTSMVELVES--SAEDASGFLKSQVQWLNELLEMESEAK 276          
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Match: A0A4Y2WSW9_ARAVE (Geranylgeranyl transferase type-2 subunit alpha (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2WSW9_ARAVE)

HSP 1 Score: 117 bits (293), Expect = 1.490e-29
Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = 0
Query:   51 ELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFLELDXXXXXXXXXXXXVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEA--GHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLL 195
            EL L+ +C+K NPKSY AWHH  W +E             R+L LC  FL LD            V+++  +S  EE D++T  I+ NFSNYSA+H+RS +LP +  +A  G  +  +L  E DL  +A FT+P DQSVW+YH +LL
Sbjct:   17 ELDLTQNCLKVNPKSYSAWHHRFWTME-----FHPEGDWKRELKLCNFFLSLDERNFHCWDYRRLVSKKCNVSPEEELDYSTTLIETNFSNYSAWHYRSTLLPIVHYDASKGSIKEDVLLKEFDLIQNAAFTDPDDQSVWFYHRWLL 158          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10283.240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK31_ECTSI1.190e-13081.55Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A835Z1Z5_9STRA7.840e-5548.40Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A4SAM5_OSTLU1.300e-3236.65Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7R9U2X8_9STRA7.970e-3243.62Geranylgeranyl transferase type-2 subunit alpha n=... [more]
UPI000C78249F1.740e-3141.03geranylgeranyl transferase type-2 subunit alpha-li... [more]
A0A0M0JE27_9EUKA9.280e-3138.10Geranylgeranyl transferase type-2 subunit alpha n=... [more]
UPI000644DC6F9.580e-3136.51hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A7S4DKH2_HETAK1.130e-3042.50Geranylgeranyl transferase type-2 subunit alpha (F... [more]
D0N0T5_PHYIT5.380e-3038.25Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A4Y2WSW9_ARAVE1.490e-2942.18Geranylgeranyl transferase type-2 subunit alpha (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002088Protein prenyltransferase, alpha subunitPFAMPF01239PPTAcoord: 127..153
e-value: 5.2E-7
score: 29.2
coord: 170..197
e-value: 4.5E-6
score: 26.2
coord: 51..78
e-value: 7.1E-8
score: 31.9
coord: 93..118
e-value: 2.4E-6
score: 27.1
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 166..200
score: 12.045
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 88..122
score: 13.417
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 123..157
score: 12.709
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 47..81
score: 13.647
NoneNo IPR availableGENE3D1.25.40.120coord: 30..233
e-value: 1.6E-62
score: 213.5
NoneNo IPR availablePANTHERPTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITcoord: 38..203
NoneNo IPR availableSUPERFAMILY48439Protein prenylyltransferasecoord: 41..200
IPR032955Geranylgeranyl transferase type-2 subunit alphaPANTHERPTHR11129:SF2GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT ALPHAcoord: 38..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10283contigE-siliculosus-1a_F_contig10283:547..2430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10283.240.1mRNA_E-siliculosus-1a_F_contig10283.240.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10283 547..2430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10283.240.1 ID=prot_E-siliculosus-1a_F_contig10283.240.1|Name=mRNA_E-siliculosus-1a_F_contig10283.240.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=233bp
AIRAQLSRIGDAHSRQGGSDGGDKAAEESSSGTLLSPSAQEQQKKNIYEE
ELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALARDLALCATFL
ELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSK
VLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADD
GADSCFDSERYENVLRAEAATLGELIEVEGRCK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032955RabGGTase_alpha
IPR002088Prenyl_trans_a