prot_E-siliculosus-1a_F_contig140.2369.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig140.2369.1
Unique Nameprot_E-siliculosus-1a_F_contig140.2369.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length226
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig140.2369.1 vs. uniprot
Match: D7FX07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX07_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 3.480e-100
Identity = 168/182 (92.31%), Postives = 172/182 (94.51%), Query Frame = 0
Query:   44 RSATQNILTQAANTDMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIAFPVTMVVYVLTCCSCCLPELMKERKRNAQRKINEVDAELLALTNVNVRRNFAISDSVSATNEDRRYTGTADPHVESVYAAHPPVSTITTTAXXXXXXXXXXXATCPSAPPDYHEYMSGVTQVHVQ 225
            R  T  +  +AANTDMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIAFPVTMVVYVLTCCSCCLPELMKE+KRNAQRKIN VDAELLALTNVNVRRNFAISDSVSATNED R+TGTADPHVESVYAAHPPVSTITTTAXXXXXXXXXXXATCPSAPPDYHEYMS V QVHVQ
Sbjct:  128 RLLTPEVQRKAANTDMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIAFPVTMVVYVLTCCSCCLPELMKEKKRNAQRKINVVDAELLALTNVNVRRNFAISDSVSATNEDHRFTGTADPHVESVYAAHPPVSTITTTAXXXXXXXXXXXATCPSAPPDYHEYMSSVKQVHVQ 309          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2369.1 vs. uniprot
Match: D8LGI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGI8_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 2.140e-93
Identity = 163/225 (72.44%), Postives = 182/225 (80.89%), Query Frame = 0
Query:    1 MVQYRPETNNEAKLRDVRAAEEIHHVQHQGSLQANRTAQTADTRSATQNILTQAANTDMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIAFPVTMVVYVLTCCSCCLPELMKERKRNAQRKINEVDAELLALTNVNVRRNFAISDSVSATNEDRRYTGTADPHVESVYAAHPPVSTITTTAXXXXXXXXXXXATCPSAPPDYHEYMSGVTQVHVQ 225
            M Q R ETNNEAKLRDVRAAEEI HV+ QG+LQ +RTAQT+DTR+ATQNILTQAAN DM MS+ HDRIKS KVEQL+KK++KLEKDEEK+RGL N AW+AFPVT +V+V T     LPELMKERKRNAQRKINEVDAELLALTNVNV RNFAISDSVSATN DRRYTGTADP +ESVYAA              XXXXXXXX      PP+YH+++ GVTQVH+Q
Sbjct:    1 MTQQRAETNNEAKLRDVRAAEEIEHVRQQGNLQGSRTAQTSDTRNATQNILTQAANMDMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFPVTAIVFVCTXXXXXLPELMKERKRNAQRKINEVDAELLALTNVNVHRNFAISDSVSATNHDRRYTGTADPQMESVYAA-------------PXXXXXXXXXXXXXXPPNYHDFVGGVTQVHIQ 212          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2369.1 vs. uniprot
Match: A0A6H5JSH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH8_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 3.580e-69
Identity = 144/219 (65.75%), Postives = 169/219 (77.17%), Query Frame = 0
Query:    7 ETNNEAKLRDVRAAEEIHHVQHQGSLQANRTAQTADTRSATQNILTQAANTDMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIAFPVTMVVYVLTCCSCCLPELMKERKRNAQRKINEVDAELLALTNVNVRRNFAISDSVSATNEDRRYTGTADPHVESVYAAHPPVSTITTTAXXXXXXXXXXXATCPSAPPDYHEYMSGVTQVHVQ 225
            ETNNEAKLR+VRAAEEI HV+ Q +LQ +RTAQT+DTR+ATQNILTQAAN DM MS+ HDRIKS KVEQL++K++KL+KDE+K+RGL N AWIAFPVT +V              +ER+RNAQRKINEVDAELL LTNVNV R+FAISDSVSATN DRR TGT DP +ESVYAA              XXXXXXXX    +APP+YH+++ GVTQVH+Q
Sbjct: 1600 ETNNEAKLRNVRAAEEIEHVRQQENLQGSRTAQTSDTRNATQNILTQAANMDMQMSIQHDRIKSAKVEQLQRKKEKLQKDEDKFRGLANVAWIAFPVTAIV-------------AEERERNAQRKINEVDAELLTLTNVNVHRSFAISDSVSATNHDRRCTGTVDPQMESVYAA-------------PXXXXXXXXXXRSAAPPNYHDFVGGVTQVHIQ 1792          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2369.1 vs. uniprot
Match: A0A6H5KZI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 7.170e-35
Identity = 93/179 (51.96%), Postives = 107/179 (59.78%), Query Frame = 0
Query:   47 TQNILTQAANTDMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIAFPVTMVVYVLTCCSCCLPELMKERKRNAQRKINEVDAELLALTNVNVRRNFAISDSVSATNEDRRYTGTADPHVESVYAAHPPVSTITTTAXXXXXXXXXXXATCPSAPPDYHEYMSGVTQVHVQ 225
            T +ILTQAAN DM MS+ HDRIKS KVEQL++K++KL                                      +ER+RNAQRKINEVDAELLALTNVNV R+FAISDSVSATN DRRYTGTADP +ES YAA              XXXXXXXX          H+++ GVTQVH+Q
Sbjct:   10 TPDILTQAANMDMQMSIQHDRIKSAKVEQLQRKKEKL-------------------------------------AEERERNAQRKINEVDAELLALTNVNVHRSFAISDSVSATNHDRRYTGTADPQMESAYAA-------------PXXXXXXXXXXXXXXXXXXHDFVGGVTQVHIQ 138          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig140.2369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FX07_ECTSI3.480e-10092.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LGI8_ECTSI2.140e-9372.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSH8_9PHAE3.580e-6965.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZI7_9PHAE7.170e-3551.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availableCOILSCoilCoilcoord: 66..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availableTMHMMTMhelixcoord: 90..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig140contigE-siliculosus-1a_F_contig140:49008..51474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig140.2369.1mRNA_E-siliculosus-1a_F_contig140.2369.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig140 48281..55538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig140.2369.1 ID=prot_E-siliculosus-1a_F_contig140.2369.1|Name=mRNA_E-siliculosus-1a_F_contig140.2369.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=226bp
MVQYRPETNNEAKLRDVRAAEEIHHVQHQGSLQANRTAQTADTRSATQNI
LTQAANTDMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIA
FPVTMVVYVLTCCSCCLPELMKERKRNAQRKINEVDAELLALTNVNVRRN
FAISDSVSATNEDRRYTGTADPHVESVYAAHPPVSTITTTAARAPMSTIT
TTATCPSAPPDYHEYMSGVTQVHVQ*
back to top