prot_E-siliculosus-1a_F_contig14.2356.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14.2356.1
Unique Nameprot_E-siliculosus-1a_F_contig14.2356.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length64
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: D7G102_ECTSI (Fatty acid desaturase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G102_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.310e-41
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 63
            MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS
Sbjct:    1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 63          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A6H5KKY7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY7_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.310e-35
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 63
            MGGINYQIEHHLFPSMSHMLYAEIAPIVKDAC+EFNIPYNAHPTLW+AYASYLKHLVVCSEMS
Sbjct:  629 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPYNAHPTLWTAYASYLKHLVVCSEMS 691          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A835YNM2_9STRA (FA_desaturase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.770e-24
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    2 GGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 56
            GGINYQIEHHLFPSM HM YA +AP+V+  C EF IPY+AH TLWSAYASYL+ L
Sbjct:    2 GGINYQIEHHLFPSMCHMHYARVAPVVRATCAEFAIPYSAHDTLWSAYASYLRSL 56          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A4Y6Q468_9DELT (Acyl-CoA desaturase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q468_9DELT)

HSP 1 Score: 82.0 bits (201), Expect = 4.810e-17
Identity = 31/56 (55.36%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 56
            +GG+NYQ+EHHLFP +SH+ Y ++A IV++ CEEF +PY+A PTLW    S+ +HL
Sbjct:  256 VGGLNYQVEHHLFPRISHIHYPKLAEIVRETCEEFGVPYHAQPTLWGGIRSHFRHL 311          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A522T616_9BACT (Acyl-CoA desaturase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A522T616_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 6.280e-16
Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 56
            +GG+N+QIEHHLFP +SH+ Y  I+P+VK+ C EFN+PY A+PT   A AS+L HL
Sbjct:  294 LGGLNFQIEHHLFPRVSHVHYRAISPLVKETCREFNLPYVAYPTFAKAVASHLLHL 349          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: E0ZJ63_PICSI (Sphingolipid desaturase-like protein (Fragment) n=5 Tax=Picea sitchensis TaxID=3332 RepID=E0ZJ63_PICSI)

HSP 1 Score: 75.9 bits (185), Expect = 8.630e-16
Identity = 28/55 (50.91%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    2 GGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 56
            GG+NYQIEHHLFPS+ H+ Y  I  IVK+ C++F++PY+++P+ W+A  ++  HL
Sbjct:   96 GGLNYQIEHHLFPSVCHLYYPSIHSIVKETCKDFDVPYHSYPSFWTALKAHFLHL 150          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A176W6Z5_MARPO (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W6Z5_MARPO)

HSP 1 Score: 79.0 bits (193), Expect = 1.230e-15
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    2 GGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 56
            GG+N+QIEHHLFP + H+ Y  I PIVK  C+EFN+PY ++PT W+A  ++ +HL
Sbjct:  602 GGLNHQIEHHLFPGVCHVHYPSIQPIVKATCDEFNVPYTSYPTFWAALRAHFQHL 656          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: UPI0012E13FAB (acyl-CoA desaturase n=1 Tax=Sphingobacterium endophyticum TaxID=2546448 RepID=UPI0012E13FAB)

HSP 1 Score: 77.8 bits (190), Expect = 2.110e-15
Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASY 52
            +GG+N+Q+EHHLFP +SH+ Y E+  IVK  C EF+IPYN +PT WSA+ S+
Sbjct:  293 LGGLNFQVEHHLFPKISHIHYPELNKIVKSTCREFSIPYNEYPTFWSAFNSH 344          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A5E8CJX7_9ZZZZ (Fatty acid desaturase n=1 Tax=seawater metagenome TaxID=1561972 RepID=A0A5E8CJX7_9ZZZZ)

HSP 1 Score: 77.8 bits (190), Expect = 2.820e-15
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    2 GGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSE 61
            GGINYQIEHHLFPSM H+ Y EIAPIVK  C+EFNI Y  H +++ +    +K L++ ++
Sbjct:  360 GGINYQIEHHLFPSMCHVHYPEIAPIVKKTCQEFNIEYVEHSSVYDSLKDVIKSLIILNK 419          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A9UZE4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZE4_MONBE)

HSP 1 Score: 77.4 bits (189), Expect = 4.040e-15
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    2 GGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLV 57
            GG+NYQIEHHLFP+++H  +  I PIVK  C+++++PYN  PTL+ A+  YL HLV
Sbjct:  385 GGLNYQIEHHLFPTVNHCHHRHIQPIVKAVCDKYSVPYNYTPTLYGAFRKYLDHLV 440          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G102_ECTSI1.310e-41100.00Fatty acid desaturase, partial n=1 Tax=Ectocarpus ... [more]
A0A6H5KKY7_9PHAE1.310e-3596.83Cytochrome b5 heme-binding domain-containing prote... [more]
A0A835YNM2_9STRA2.770e-2474.55FA_desaturase domain-containing protein (Fragment)... [more]
A0A4Y6Q468_9DELT4.810e-1755.36Acyl-CoA desaturase n=2 Tax=Persicimonas caeni Tax... [more]
A0A522T616_9BACT6.280e-1658.93Acyl-CoA desaturase n=1 Tax=Chitinophagaceae bacte... [more]
E0ZJ63_PICSI8.630e-1650.91Sphingolipid desaturase-like protein (Fragment) n=... [more]
A0A176W6Z5_MARPO1.230e-1554.55Cytochrome b5 heme-binding domain-containing prote... [more]
UPI0012E13FAB2.110e-1557.69acyl-CoA desaturase n=1 Tax=Sphingobacterium endop... [more]
A0A5E8CJX7_9ZZZZ2.820e-1555.00Fatty acid desaturase n=1 Tax=seawater metagenome ... [more]
A9UZE4_MONBE4.040e-1555.36Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005804Fatty acid desaturase domainPFAMPF00487FA_desaturasecoord: 1..41
e-value: 8.0E-11
score: 42.3
NoneNo IPR availablePANTHERPTHR19353:SF14DELTA(5) FATTY ACID DESATURASE C-RELATEDcoord: 2..57
NoneNo IPR availablePANTHERPTHR19353FATTY ACID DESATURASE 2coord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14contigE-siliculosus-1a_F_contig14:39625..40282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14.2356.1mRNA_E-siliculosus-1a_F_contig14.2356.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14 39534..40844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14.2356.1 ID=prot_E-siliculosus-1a_F_contig14.2356.1|Name=mRNA_E-siliculosus-1a_F_contig14.2356.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=64bp
MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYA
SYLKHLVVCSEMS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005804FA_desaturase_dom