mRNA_E-siliculosus-1a_F_contig14.2356.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A6H5KKY7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY7_9PHAE) HSP 1 Score: 200 bits (509), Expect = 2.390e-58 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 2
Query: 2 GGTEEEEGYGDDWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 292
G TEEE+GYGDDWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDAC+EFNIPYNAHPTLW+AYASYLKHLVVCSEMS
Sbjct: 595 GDTEEEDGYGDDWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACKEFNIPYNAHPTLWTAYASYLKHLVVCSEMS 691
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: D7G102_ECTSI (Fatty acid desaturase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G102_ECTSI) HSP 1 Score: 138 bits (347), Expect = 1.740e-40 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 2
Query: 104 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 292
MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS
Sbjct: 1 MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 63
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A835YNM2_9STRA (FA_desaturase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM2_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.220e-23 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 2
Query: 107 GGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 271
GGINYQIEHHLFPSM HM YA +AP+V+ C EF IPY+AH TLWSAYASYL+ L
Sbjct: 2 GGINYQIEHHLFPSMCHMHYARVAPVVRATCAEFAIPYSAHDTLWSAYASYLRSL 56
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A5K0U7T4_9VIRU (Cytochrome b5-like heme/steroid binding domain n=1 Tax=Yasminevirus sp. GU-2018 TaxID=2420051 RepID=A0A5K0U7T4_9VIRU) HSP 1 Score: 98.2 bits (243), Expect = 1.700e-21 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 2
Query: 35 DWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSEMS 292
DWGE+QVR+SGNF+ N T MGGINYQIEHHLFPS+ H+ Y I+ IVK C EFNIPY + ++ SA L H++ S+ S
Sbjct: 359 DWGEMQVRNSGNFATSNKVFTYFMGGINYQIEHHLFPSVCHVHYPAISSIVKKTCAEFNIPYVEYDSVVSAVNECLTHMLNVSDTS 444
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: UPI0006964E57 (fatty acid desaturase n=1 Tax=Aureispira sp. CCB-QB1 TaxID=1313421 RepID=UPI0006964E57) HSP 1 Score: 96.7 bits (239), Expect = 5.650e-21 Identity = 42/87 (48.28%), Postives = 62/87 (71.26%), Query Frame = 2
Query: 26 YGDDWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHLVVCSE 286
Y DWG +QV + NF +GN F+T GG+ YQIEHHLFP++S+ EIAPIVK+ C+EF++PY+ +PTL+S Y ++ ++ S+
Sbjct: 351 YPRDWGSLQVESTVNFEHGNWFLTMMTGGLGYQIEHHLFPTISYSRLHEIAPIVKETCKEFDLPYHYYPTLFSVYRAHFSYIKSMSK 437
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: UPI0012E13FAB (acyl-CoA desaturase n=1 Tax=Sphingobacterium endophyticum TaxID=2546448 RepID=UPI0012E13FAB) HSP 1 Score: 95.5 bits (236), Expect = 7.010e-21 Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 2
Query: 32 DDWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASY 259
D+W Q++ + NF+ GN F+T +GG+N+Q+EHHLFP +SH+ Y E+ IVK C EF+IPYN +PT WSA+ S+
Sbjct: 269 DEWMVHQLQSTSNFATGNKFLTWLLGGLNFQVEHHLFPKISHIHYPELNKIVKSTCREFSIPYNEYPTFWSAFNSH 344
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A4Y6Q468_9DELT (Acyl-CoA desaturase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q468_9DELT) HSP 1 Score: 94.7 bits (234), Expect = 1.000e-20 Identity = 38/79 (48.10%), Postives = 56/79 (70.89%), Query Frame = 2
Query: 35 DWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 271
DW Q+ + +F+ NP +T +GG+NYQ+EHHLFP +SH+ Y ++A IV++ CEEF +PY+A PTLW S+ +HL
Sbjct: 233 DWATHQLMTTVDFAQKNPLITWYVGGLNYQVEHHLFPRISHIHYPKLAEIVRETCEEFGVPYHAQPTLWGGIRSHFRHL 311
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A176W6Z5_MARPO (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W6Z5_MARPO) HSP 1 Score: 96.3 bits (238), Expect = 1.230e-20 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 2
Query: 38 WGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 271
W E+QVR + NFS+ + F T GG+N+QIEHHLFP + H+ Y I PIVK C+EFN+PY ++PT W+A ++ +HL
Sbjct: 579 WAEMQVRTTTNFSSRSMFWTHISGGLNHQIEHHLFPGVCHVHYPSIQPIVKATCDEFNVPYTSYPTFWAALRAHFQHL 656
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: A0A6C0ESA5_9ZZZZ (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESA5_9ZZZZ) HSP 1 Score: 93.6 bits (231), Expect = 5.580e-20 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 29 GDDWGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 271
G DW + Q+ +SGNF NGN T A GIN+QIEHHLFP++ Y IAPIV++ C+E N+PY HPTL SAY S++K +
Sbjct: 316 GSDWAKRQICNSGNFMNGNRIWTMAFSGINHQIEHHLFPNICGHNYTYIAPIVEEFCKENNLPYVHHPTLISAYNSFMKKI 396
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Match: UPI0019BF28EB (Acyl-CoA desaturase n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI0019BF28EB) HSP 1 Score: 93.2 bits (230), Expect = 5.790e-20 Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 2
Query: 38 WGEVQVRHSGNFSNGNPFVTQAMGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYASYLKHL 271
W E QV+ + NF+ GNPF+ +GG+N+Q+EHHLFP +SH+ Y I+ IV+ C++F +PYN +PT+WSA S+ + +
Sbjct: 273 WAEHQVKTTCNFAMGNPFINWYVGGLNFQVEHHLFPKISHVHYPAISKIVEAQCKQFGLPYNYYPTMWSALCSHFRFM 350 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14.2356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14.2356.1 >prot_E-siliculosus-1a_F_contig14.2356.1 ID=prot_E-siliculosus-1a_F_contig14.2356.1|Name=mRNA_E-siliculosus-1a_F_contig14.2356.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=64bp MGGINYQIEHHLFPSMSHMLYAEIAPIVKDACEEFNIPYNAHPTLWSAYAback to top mRNA from alignment at E-siliculosus-1a_F_contig14:39534..40844- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14.2356.1 ID=mRNA_E-siliculosus-1a_F_contig14.2356.1|Name=mRNA_E-siliculosus-1a_F_contig14.2356.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1311bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14:39534..40844- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14:39534..40844- >mRNA_E-siliculosus-1a_F_contig14.2356.1 ID=mRNA_E-siliculosus-1a_F_contig14.2356.1|Name=mRNA_E-siliculosus-1a_F_contig14.2356.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=384bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14:39534..40844- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |