mRNA_E-siliculosus-1a_F_contig1393.2326.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: D8LCY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY9_ECTSI) HSP 1 Score: 884 bits (2284), Expect = 1.290e-305 Identity = 543/604 (89.90%), Postives = 556/604 (92.05%), Query Frame = 1
Query: 1 MSRATLDTEAREQGGNPNRVGVLEPAAHGPSPKQLHELLHILMGTPAGIVQQVGYLLMLFVAVVKAGAAANNDSGAGSGGNCGDSSVNCRTPDQVAPAGAACRTRGSTTITAAERKRAIDLLQAATKEAKKKNKMRGAAKASIKSGRCLTKATDGRDAVKAKTLQCWAAKGKQNVRQLLKLLLGSAGAVGKARPDHARLLKFHAQGISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSNGSASPSSTPSPSSSQADIAVGGEDIPTSAVDRTSMSKQQQLEHLSHDERSDLLPVSLPGSRIVKTPSPSSCGQERRSSNGAQPSNVASIGIAGHANNTTPGFVPSTSPLSSSLLNESVRGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VPLARKRSDSSTERIQGDGENGISTPAPSACTDAMDGPTTAQQAPRQASLVLDEVTNTPGPAGTAAEGGAST-HSPPPTGVTLDQDVVMPSGVALVLDLEPSTRSEAPSGAGEPYGGGQIVPYGYMPTAVATTASPERRDARVPLSLSGTVETILSQLVSIRLSSPILYRTLVSLDVTADNIKQARFLVWYGGA*ER 1797
MSRAT D EAREQGGNPNRVGVLEPAAHGP+PKQLHELLHILMGTPAGIVQQVGYLLMLFVAVVKAGAAANNDSGAGSGGNCGDS+VNCRTP QVAP GAACRTRGSTT+TAAERK AI LL+AATKEAKKKNKMRGAAK SIKSGRCL KATDG DAVKAKTLQCWAAKGKQNVRQLLKLLL SAGAVGKARPDHARLLKFHAQ ISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSNGSASPSSTPSPSSSQADIAVGGEDIPTSAVDRTS SKQQQ EHLSHDERSDLLPVSLPGSRIV+TPSPSSCGQERRSSNGAQPSNVASI I GHAN+TTPGF STSPLSSSLL ESV+GT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PL RKRSDSSTERIQGD ENG+S PAP ACTD MDGPTTAQ APR+ASLVLDEVTNTPGPA AAEGGAST HSPPP GV LDQ+VVMPSGVAL LD E STRSE PSGAGEPYGGGQIVPYGYMPT VATTASPERR+ARVP S SGTVETILSQLV RLSSPILYR LVSLDVTAD IKQA F+VW+GGA ER
Sbjct: 1 MSRATRD-EAREQGGNPNRVGVLEPAAHGPTPKQLHELLHILMGTPAGIVQQVGYLLMLFVAVVKAGAAANNDSGAGSGGNCGDSTVNCRTPGQVAP-GAACRTRGSTTVTAAERKSAIALLKAATKEAKKKNKMRGAAKPSIKSGRCLAKATDGSDAVKAKTLQCWAAKGKQNVRQLLKLLLESAGAVGKARPDHARLLKFHAQDISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSNGSASPSSTPSPSSSQADIAVGGEDIPTSAVDRTSTSKQQQREHLSHDERSDLLPVSLPGSRIVETPSPSSCGQERRSSNGAQPSNVASIAIVGHANSTTPGFDTSTSPLSSSLLKESVQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLTRKRSDSSTERIQGDRENGVSAPAPLACTDVMDGPTTAQPAPRRASLVLDEVTNTPGPAEIAAEGGASTTHSPPPAGVALDQEVVMPSGVALNLDAEASTRSEPPSGAGEPYGGGQIVPYGYMPT-VATTASPERREARVPHSPSGTVETILSQLVFFRLSSPILYRALVSLDVTAD-IKQACFVVWHGGALER 600
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: A0A6H5JXL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXL9_9PHAE) HSP 1 Score: 630 bits (1626), Expect = 3.200e-209 Identity = 377/531 (71.00%), Postives = 396/531 (74.58%), Query Frame = 1
Query: 1 MSRATLDTEAREQGGNPNRVGVLEPAAHGPSPKQLHELLHILMGTPAGIVQQVGYLLMLFVAVVKAGAAANNDSGAGSGGNCGDSSVNCRTPDQVAPAGAACRTRGSTTITAAERKRAIDLLQAATKEAKKKNKMRGAAKASIKSGRCLTKATDGRDAVKAKTLQCWAAKGKQNVRQLLKLLLGSAGAVGKARPDHARLLKFHAQGISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSNGSASPSSTPSPSSSQADIAVGGEDIPTSAVDRTSMSKQQQLEHLSHDERSDLLPVSLPGSRIVKTPSPSSCGQERRSSNGAQPSNVASIGIAGHANNTTPGFVPSTSPLSSSLLNESVRGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLARKRSDSSTERIQGDGENGISTPAPSACTDAMDGPTTAQQAPRQASLVLDEVTNTPGPAGTAAEGGAST-HSPPPTGVTLDQDVVMPSGVALVLDLEPSTRSEAPSGAGEPYGGGQIVPYGYMPT 1590
MSRAT DTEAREQGGNPNRV VL+PAAHGPSPKQLHELLHIL+GTPAGIVQQVGYLLMLFV VVK GAAANNDS A SGGNCGDS+ NCRTPDQVA GAA +TRGSTT+TAAERK AI LLQAATKEAKKKNKMRGAAKASIKSGRCL K TDG DA KAKTLQCWAAKGKQNVRQL+K+LLG LL G+ R GSSAAGAAFELMIG+IDAALHDDGKTSNGS SPSSTPSPSSSQADIAVGGEDIPTSAVDRTS SKQQQL+H SHDERSDL+PVSLPG RIV+TPSPSS QERRSSNGAQPSNVA IGI GHANNT P FV STSPLSSSLL + VRGT P + + D T D PS+ D + P T + QASLVLDEVTNTPGPAG AAEGG ST HSPPP GV LDQ+VVMPSGVAL LD E STRSE PSGAGEPYGGGQIVPYGYMPT
Sbjct: 1 MSRATRDTEAREQGGNPNRVSVLDPAAHGPSPKQLHELLHILIGTPAGIVQQVGYLLMLFVDVVKVGAAANNDSSAASGGNCGDSTANCRTPDQVAT-GAAGQTRGSTTVTAAERKSAISLLQAATKEAKKKNKMRGAAKASIKSGRCLEKTTDGSDAAKAKTLQCWAAKGKQNVRQLVKILLG--------------LLVRWGIGL-----RVGSSAAGAAFELMIGVIDAALHDDGKTSNGSVSPSSTPSPSSSQADIAVGGEDIPTSAVDRTSTSKQQQLKHFSHDERSDLVPVSLPGGRIVETPSPSSWSQERRSSNGAQPSNVAGIGIVGHANNTAPAFVLSTSPLSSSLLRKLVRGTAAAGAAASLSEE----------------------------TPSSSPKEDMFTIFEAADER------WPSSDDDGEEAPLTRKM---QASLVLDEVTNTPGPAGMAAEGGTSTTHSPPPAGVALDQEVVMPSGVALNLDAEASTRSEPPSGAGEPYGGGQIVPYGYMPT 474
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: D8LFU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFU0_ECTSI) HSP 1 Score: 315 bits (806), Expect = 3.510e-97 Identity = 161/177 (90.96%), Postives = 165/177 (93.22%), Query Frame = 2
Query: 2429 EYPRCRAGYENVEEGQAKWALSVIGKIADAIDAPTHTVTLAAMTLGVAGGVPGLMDALTNEQICLLPAACVADSIYRLQESGTEESPAYDFDTVTDAMLAITKTSSEGRGDGGRDVFGETSDEDAKTQLLALVVLLNDALPEGLSCPGSLHFVRILADQSGLSDTRTDQELEDFFDQ 2959
EYPR RAGYENVEEGQAKWALSVIGKIADAIDAPTHTVTLAAMTLGVAGGVPG MD LTNEQICLLPAACV DSI RL ESGTEESPA DF+TVTDAMLAITKTSSEGRGDGG D+FGETSDEDAKTQL ALVVLLN+ALPEGLSCP SLHF+RILADQSGL TRTDQELEDFFDQ
Sbjct: 2 EYPRYRAGYENVEEGQAKWALSVIGKIADAIDAPTHTVTLAAMTLGVAGGVPGFMDGLTNEQICLLPAACVGDSICRLLESGTEESPACDFNTVTDAMLAITKTSSEGRGDGGSDIFGETSDEDAKTQLFALVVLLNNALPEGLSCPESLHFIRILADQSGLCGTRTDQELEDFFDQ 178
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: D8LFU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFU1_ECTSI) HSP 1 Score: 293 bits (749), Expect = 6.020e-88 Identity = 246/415 (59.28%), Postives = 250/415 (60.24%), Query Frame = 1
Query: 172 MLFVAVVKAGAAANNDSGAGSGGNCGDSSVNCRTPDQVAPAGAACRTRGSTTITAAERKRAIDLLQAATKEAKKKNKMRGAAKASIKSGRCLTKATDGRDAVKAKTLQCWAAKGKQNVRQLLKLLLGSAGAVGKARPDHARLLKFHAQGISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSNGSASPSSTPSPSSSQADIAVGGEDIPTSAVDRTSMSKQQQLEHLSHDERSDLLPVSLPGSRIVKTPSPSSCGQERRSSNGAQPSNVASIGIAGHANNTTPGFVPSTSPLSSSLLNESVRGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VPLARKRSDSSTERIQGDGENGISTPAPSACTDAMDGPTTAQQAPRQASLVLDEVTNTPGPAGTAAEG 1413
MLFV VVKA AAANNDSGAGSGGNCGDS+VNCRTPDQVAP GAA RTRGSTT+TAAERK AIDLLQAATKE KK N MRGA+K SIKSGRCL KATDGRDAVKAKTLQCWAAKGKQNVRQLLKLL GSAG V ARPDHARLLKFHAQGISS+EARK ESVRGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PL RKRSDSSTERIQGDGENGISTPAPSACTDAMDGPT AQQ PRQASLVLDEVTNTPGPA AEG
Sbjct: 1 MLFVTVVKASAAANNDSGAGSGGNCGDSTVNCRTPDQVAP-GAAGRTRGSTTVTAAERKSAIDLLQAATKETKKNN-MRGASKPSIKSGRCLAKATDGRDAVKAKTLQCWAAKGKQNVRQLLKLLFGSAGTVVNARPDHARLLKFHAQGISSKEARK-----------------------------------------------------------------------------------------------------------------------------------------------ESVRGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLTRKRSDSSTERIQGDGENGISTPAPSACTDAMDGPTKAQQVPRQASLVLDEVTNTPGPAEMTAEG 270
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: A0A6H5K4P3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P3_9PHAE) HSP 1 Score: 234 bits (596), Expect = 8.300e-60 Identity = 126/232 (54.31%), Postives = 159/232 (68.53%), Query Frame = 2
Query: 2390 DTRMGAFLCLEEREYPRCRAGYENVEEGQAKWALSVIGKIADAIDAPTHTVTLAAMTLGVAGGVPGLMDALTNEQICLLPAACVADSIYRLQESGTEESPAYDFDTVTDAMLAITKTSSEGRGDGGRDVFGETSDEDAKTQLLALVVLLNDALPEGLSCPGSLHFVRILADQSGLSDTRTDQELEDFFDQTDKGVRTAVLNGLLRTLSPSDIARGAFFGATGVSVKFTEQSA 3085
D + A LCLEE+ YPRCR GYE++ EG+ +WALSVI +I D I+ PT V LAA+TLGV +PG + ++E +CLLPAACV+ +I RL + +ES + D + D MLAITK +SEGRG G VFG+ D KT LLAL L LPE L+CPG + ++ + A+QSGL T T QEL +D+ D+ VR LNGLLRTLSPSDIARGAFFGA GVS+ F+EQ A
Sbjct: 835 DKLVDAHLCLEEKAYPRCREGYESIPEGKVRWALSVIREITDTINVPTPIVALAAITLGVTAAIPGFLSRRSDEDLCLLPAACVSHAISRLDK--LDES-SVDLYGIMDQMLAITKAASEGRGKNGGPVFGQPGAGDPKTILLALFFYLMLTLPEELTCPGPMDYMEVFAEQSGLDHTLTGQELGCVYDEYDRFVRAVALNGLLRTLSPSDIARGAFFGAAGVSIVFSEQGA 1063
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: D8LNB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB0_ECTSI) HSP 1 Score: 213 bits (541), Expect = 3.450e-56 Identity = 223/542 (41.14%), Postives = 263/542 (48.52%), Query Frame = 1
Query: 1 MSRATLDTEAREQGGNPNRVGVLEPAAHGPSPKQLHELLHILMGTPAGIVQQVGYLLMLFVAVVKAGAAANNDSGAGSGGNCGDSSVNCRTPDQVAPAGAACRTRGSTTITAAERKRAIDLLQAATKEAKKKNKMRGAAKASIKSGRCLTKATDGRD-AVKAKTLQCWAAKGKQNVRQLLKLLLGSAGAVGKARPDHARLLKFHAQGISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSNGSASPSSTPSPSSSQADIAVGGEDI---PTSAVDRTSMSKQQQLEHLSHDERSDLLPVSLPGSRIVKTPSPSSCGQERRSSNGAQPSNVASIGIAGHANNTTPGFVPSTSPLSSSLLNESVRGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVP-----LARKRSDSSTERIQGDGENGISTPAPSACT-DAMDGPTTAQQAPRQASLVLD-EVTNTPGPAGTAAEGGAS-------------THSPPPTGVTLDQDVVMPSGVALVLDLEPSTRSEA----PSGAG 1542
MS T+ ++G RVGV A GPS KQL ELLH+L GTPAG VQQVG+L+MLFVAVVK K+AIDLLQ A KE KK K GAAKA K+GR +T G + A KAK LQ WAAK K N RQLL+LLLGS A+ +ARP ARLLK HAQ I SEEAR GSSAA AAF++MI IID L DD S + P+PSS + + AVGGE++ PTS + TS QQ L+ L + S L+ SL +P S+C ++ N + V ++ A PS XXXXXXXXXXXXXX XXX LA KRS S ER GDGENG TP PSAC D +D + Q A RQ SL+LD EV+NT AE T SP TGVTL+Q +V+P GV + D ST SE SGAG
Sbjct: 1 MSHMAHGTKTAKKGDVGGRVGVPGQTAQGPSSKQLRELLHVLKGTPAGAVQQVGHLMMLFVAVVK--------------------------------------------------KQAIDLLQHAKKEIHKKKKATGAAKAG-KAGRRVTSLRGGTNGAEKAKRLQRWAAKSKTNARQLLQLLLGSRAAL-EARPGLARLLKLHAQDIISEEARNGSSAAAAAFDMMITIIDGVLSDDSSRST-----PALPTPSSPEPNSAVGGEEVNERPTSTIGETSTRPQQLLKQLPQNA-SKLIEASL-------SPLWSACSEDSVRGNATGAATVIEEALSKDAQVLVARPWPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSSKGMPDGVEDAVERRPSSGXXXXXXXXXXLAGKRSTSRAERGGGDGENGAPTPTPSACAADVVDDSSAGQPAARQGSLILDDEVSNTSEFTWVTAEXXXXXXXXXXXXXXXXXTGSPQTTGVTLEQALVLPPGVTMSFDRGASTPSETLSWPSSGAG 477
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: D7G7D9_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D9_ECTSI) HSP 1 Score: 171 bits (434), Expect = 6.020e-40 Identity = 126/227 (55.51%), Postives = 147/227 (64.76%), Query Frame = 1
Query: 58 VGVLEPAAHGPSPKQLHELLHILMGTPAGIVQQVGYLLMLFVAVVKAGAAANNDSG----AGSGGNCGDSSVNCRTPDQVAPAGAACRTRGSTTITAAERKRAIDLLQAATKEAKKKNKMRGAAKASIKSGRCLTKATDGRDAVKAKTLQCWAAKGKQNVRQLLKLLLGSAGAVGKARPDHARLLKFHAQGISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSN 726
VGV E PS KQL ELL +LMGTPAG+VQQVGYLLMLFVAVVKAG+ A D+G GD NC + QVA + AA R R +T A ERK AI LLQ A KE KK NK RG K K G C+ +D D KAK LQ WAAKGK++V QL +L LGS G K R DHARLL FHA+ ISSEEA+KGSSAA AAFE+M I++ L+ G+ ++
Sbjct: 8 VGVSEQVVRHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLFVAVVKAGSPAT-DAGDXXXXXXXXXTGDG--NCGSQPQVARS-AAGRLRDTT---AEERKEAIVLLQTAHKELKK-NKTRGVGKGG-KGGMCVATRSDRSDEAKAKGLQRWAAKGKRHVGQLQQLFLGS-GVAMKGRQDHARLLNFHAKRISSEEAKKGSSAAAAAFEMMKATINSVLNTCGEATS 224
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: D7G7C6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C6_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 2.070e-15 Identity = 60/119 (50.42%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 442 CLTKATDGRDAVKAKTLQCWAAKGKQNVRQLLKLLLGSAGAVGKARPDHARLLKFHAQGISSEEARKGSSAAGAAFELMIGIIDAALHDDGKTSNGSASPSSTPSPSSSQADIAVGGED 798
C++ + D KAK LQ WAAKGK++V QL +L LGS AV K R DHARLL FH + ISSEE +KGSSAA AAFE+M I++ L+ G+ + SA ++ SS +D VG ED
Sbjct: 2 CVSTRSGPSDEAKAKGLQRWAAKGKRHVGQLQQLFLGSGVAV-KGRQDHARLLNFHTKRISSEEVKKGSSAAAAAFEMMKATINSVLNTCGEAT--SADTAAAGQRSSDGSDNDVGDED 117
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Match: A0A6H5KRZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ5_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 3.290e-11 Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = -2
Query: 259 SLQEIDGALPFCRRDRRGTAGSTSSTCWSNLVWSPAVD 372
SLQEIDGALPFCRRDRRGT GSTSST WSNLV SPAVD
Sbjct: 24 SLQEIDGALPFCRRDRRGTVGSTSST-WSNLVSSPAVD 60 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1393.2326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1393.2326.1 >prot_E-siliculosus-1a_F_contig1393.2326.1 ID=prot_E-siliculosus-1a_F_contig1393.2326.1|Name=mRNA_E-siliculosus-1a_F_contig1393.2326.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=597bp MSRATLDTEAREQGGNPNRVGVLEPAAHGPSPKQLHELLHILMGTPAGIVback to top mRNA from alignment at E-siliculosus-1a_F_contig1393:28708..33081+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1393.2326.1 ID=mRNA_E-siliculosus-1a_F_contig1393.2326.1|Name=mRNA_E-siliculosus-1a_F_contig1393.2326.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4374bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1393:28708..33081+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1393:28708..33081+ >mRNA_E-siliculosus-1a_F_contig1393.2326.1 ID=mRNA_E-siliculosus-1a_F_contig1393.2326.1|Name=mRNA_E-siliculosus-1a_F_contig1393.2326.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3582bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1393:28708..33081+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |