prot_E-siliculosus-1a_F_contig10269.230.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10269.230.1
Unique Nameprot_E-siliculosus-1a_F_contig10269.230.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length648
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10269.230.1 vs. uniprot
Match: D8LHG6_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG6_ECTSI)

HSP 1 Score: 838 bits (2165), Expect = 9.310e-293
Identity = 587/651 (90.17%), Postives = 595/651 (91.40%), Query Frame = 0
Query:    5 GAWRSRARTWASMGDLAEADVAPDVTGGGGA--EGTAGGSKGAGVRWASRRRSSTSECSTADGSAVAIEDEDGGRIGGGSQRHRGSMRSCLSRDSLAAASDGGDTDLADRTCSEASDLEENQENIVFHSNSSILFREGVCRTIRKRVGPPRVPSLPPSRHRRTLAAVKNLNSFHDATALAATQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAVAGLAVAGKFLGLNKGMVDKAAQEMGKKLALWPGAAGMGGAAMTSVSSLGSLAAGAITGVTSNSXXXXXXXXXXXXXXXNCNPHTPLGSPRSASASVSAALTDSPVRWDPSSQHGSTVSTDLGLGEISGAESEACVNRGRQSLDAKAAXXXXXXXXXXXVXXXXLSAAVGGGLKRVSSSRTALIQLSDLELAEPCGKRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VLPPRPDDEYELLFTTRVIGLQFRELLDGTGVCVAGSEGYVGPAPTTGVPGERLCPDTGDVLESYNGVSARGKPADVVSQELAQCGRPLRLGFRSTRAERELLAEEKEGEMETAWVGGSRPRAPLSEDGSGXXXXXXXXXXGGAAAVSSGASSCRDEAFAGPSQHPWAVSS 647
            GAWRSRARTWASMGDLAEADVAPDVTGGGG   +GTAGGSKGAGVRWASRRRSSTSECSTAD S VAIED+DGGRIGGGSQR RGSMRSCLSRDSLAAASDGGDTDLADRTCSEASDLEENQENIVFHSN S  FREGVCRTIRKRVGPPRVPSLPPSRHRRTLAAVKNLNSFHDATALAATQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAPAVAGLAVAGKFLGLNKGMVDKAAQEMGKKLALWPGAAGMGGAAMTSV SLGSLAAGAITGVTSNS               N +PHTPLGSPRSASASVSAALTDSPVRWDPSSQHGSTVSTDLGLGEISGAE EACVNRGRQSLDAKAAXXXXXXXX   V   XLSAAVGGGLKRVSSSRTALIQLSDLELAEPCG+RIG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      VLPPRPDDEYELLFTTRVIGLQFRELLDGTGVCVAGSEGYVGPAPTTGVPGERLCPDTGDVLESYNGVSARGKPADVV++ELAQCGRPLRLGFRSTRAE  LLAEE+EGEME AWVGGSRPRAPL E+GSG XXXXXXXXX          SSCRDEAFAGPSQHPWAVSS
Sbjct:  454 GAWRSRARTWASMGDLAEADVAPDVTGGGGGGVDGTAGGSKGAGVRWASRRRSSTSECSTADVSTVAIEDDDGGRIGGGSQRRRGSMRSCLSRDSLAAASDGGDTDLADRTCSEASDLEENQENIVFHSNISSQFREGVCRTIRKRVGPPRVPSLPPSRHRRTLAAVKNLNSFHDATALAATQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AAPAVAGLAVAGKFLGLNKGMVDKAAQEMGKKLALWPGAAGMGGAAMTSVCSLGSLAAGAITGVTSNSNSNAAAGGAG-----NYHPHTPLGSPRSASASVSAALTDSPVRWDPSSQHGSTVSTDLGLGEISGAEWEACVNRGRQSLDAKAAXXXXXXXXVGAVAASXLSAAVGGGLKRVSSSRTALIQLSDLELAEPCGRRIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPRPDDEYELLFTTRVIGLQFRELLDGTGVCVAGSEGYVGPAPTTGVPGERLCPDTGDVLESYNGVSARGKPADVVARELAQCGRPLRLGFRSTRAEEGLLAEEEEGEMEPAWVGGSRPRAPLLEEGSGSXXXXXXXXXXXXXXXXX--SSCRDEAFAGPSQHPWAVSS 1096          
BLAST of mRNA_E-siliculosus-1a_F_contig10269.230.1 vs. uniprot
Match: A0A6H5KNE7_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE7_9PHAE)

HSP 1 Score: 764 bits (1974), Expect = 1.190e-262
Identity = 543/644 (84.32%), Postives = 558/644 (86.65%), Query Frame = 0
Query:    6 AWRSRARTWASMGDLAEADVAPDVTGGG-GAEGTAGGSKGAGVRWASRRRSSTSECSTADGSAVAIEDEDGGRIGGGSQRHRGSMRSCLSRDSLAAASDGGDTDLADRTCSEASDLEENQENIVFHSNSSILFREGVCRTIRKRVGPPRVPSLPPSRHRRTLAAVKNLNSFHDATALAATQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAVAGLAVAGKFLGLNKGMVDKAAQEMGKKLALWPGAAGMGGAAMTSVSSLGSLAAGAITGVTSNSXXXXXXXXXXXXXXXNCNPHTPLGSPRSASASVSAALTDSPVRWDPSSQHGSTVSTDLGLGEISGAESEACVNRGRQSLDAKAAXXXXXXXXXXXVXXXXLSAAVGGGLKRVSSSRTALIQLSDLELAEPCGKRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPPRPDDEYELLFTTRVIGLQFRELLDGTGVCVAGSEGYVGPAPTTGVPGERLCPDTGDVLESYNGVSARGKPADVVSQELAQCGRPLRLGFRSTRAERELLAEEKE-GEMETAWVGGSRPRAPLSEDGSGXXXXXXXXXXGGAAAVSSGASSCRDEAFAGPSQHPWAVSS 647
            AWRSRARTWASMGDLAEADVAPDVTGG  G +GTAGGSKGAGVRWASR RSSTSE STADGS VAIED+DGG+IG   QR RGSMRSCLSR+SLAAASDGGDTDLADRTCSEASDLEENQENIVFHS+SS  FREGVCRTIRKRVGPPRVPSLPPSRHRRTLAAVKNLNSFHDAT LAATQLQXXXXXXXXXXXXXXXXXXXXXXXXXXX                 AAPAVAGLAVAG FLGLNKGMVDKAAQEMGKKLALWPGAAGMG AAMTSVS                 XXXXXXXXXXXXXXXN +PHTPLGSPRSASASVSAALTDSPVRWDPSSQHGSTVSTDLGLGEISGAESEACVNRGRQSLDAKAAXXXXXXXXXXX XXXX       GLKRVSSSRTALIQL+DLELAEPCG++IGG      XXXXXXXXXXXXXXXXXXXXXXXXXXXX      VLPPRPDDEYELLFTTRVIGLQF+ELLDGTGVCVAG+EGYVGPAPTTGVPGERLCPD GDVLESYNGVSARGKPADVV++ELAQCGRPLRLGFRSTRAE ELL EE+E GEMETAWVG SRPR PL E+GSGXXXXXXXXXX         ASSCRDEAFAGPSQHPWAVSS
Sbjct:  574 AWRSRARTWASMGDLAEADVAPDVTGGSSGGDGTAGGSKGAGVRWASRCRSSTSEFSTADGSTVAIEDDDGGKIGXXXQRRRGSMRSCLSRESLAAASDGGDTDLADRTCSEASDLEENQENIVFHSSSSSQFREGVCRTIRKRVGPPRVPSLPPSRHRRTLAAVKNLNSFHDATVLAATQLQXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------AAPAVAGLAVAGMFLGLNKGMVDKAAQEMGKKLALWPGAAGMGEAAMTSVSXXXXX-----XXXXXXXXXXXXXXXXXXXXXXNYHPHTPLGSPRSASASVSAALTDSPVRWDPSSQHGSTVSTDLGLGEISGAESEACVNRGRQSLDAKAAXXXXXXXXXXXXXXXXXXXXXXXGLKRVSSSRTALIQLADLELAEPCGRQIGGGGNEMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRLSSVLPPRPDDEYELLFTTRVIGLQFQELLDGTGVCVAGTEGYVGPAPTTGVPGERLCPDNGDVLESYNGVSARGKPADVVARELAQCGRPLRLGFRSTRAEDELLPEEEEEGEMETAWVGDSRPRTPLLEEGSGXXXXXXXXXXXXXXXX---ASSCRDEAFAGPSQHPWAVSS 1192          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10269.230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHG6_ECTSI9.310e-29390.17PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KNE7_9PHAE1.190e-26284.32PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10269contigE-siliculosus-1a_F_contig10269:94..2396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10269.230.1mRNA_E-siliculosus-1a_F_contig10269.230.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10269 94..2396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10269.230.1 ID=prot_E-siliculosus-1a_F_contig10269.230.1|Name=mRNA_E-siliculosus-1a_F_contig10269.230.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=648bp
GGGGGAWRSRARTWASMGDLAEADVAPDVTGGGGAEGTAGGSKGAGVRWA
SRRRSSTSECSTADGSAVAIEDEDGGRIGGGSQRHRGSMRSCLSRDSLAA
ASDGGDTDLADRTCSEASDLEENQENIVFHSNSSILFREGVCRTIRKRVG
PPRVPSLPPSRHRRTLAAVKNLNSFHDATALAATQLQQQQQQPDEAFGSG
GGGGGDDHGVGGFSAEASGGGGGGGGNGASSAAPAVAGLAVAGKFLGLNK
GMVDKAAQEMGKKLALWPGAAGMGGAAMTSVSSLGSLAAGAITGVTSNSN
SNSNSNAAAGGGAGNCNPHTPLGSPRSASASVSAALTDSPVRWDPSSQHG
STVSTDLGLGEISGAESEACVNRGRQSLDAKAAAAAGGGGGVGAVAASAL
SAAVGGGLKRVSSSRTALIQLSDLELAEPCGKRIGGGGEETGSSRPRSSA
TPPSSLSLAAAAAPPPSSSSRRRLSSVLPPRPDDEYELLFTTRVIGLQFR
ELLDGTGVCVAGSEGYVGPAPTTGVPGERLCPDTGDVLESYNGVSARGKP
ADVVSQELAQCGRPLRLGFRSTRAERELLAEEKEGEMETAWVGGSRPRAP
LSEDGSGGSGGSGGAWGGGAAAVSSGASSCRDEAFAGPSQHPWAVSS*
back to top