prot_E-siliculosus-1a_F_contig1376.2247.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1376.2247.1
Unique Name	prot_E-siliculosus-1a_F_contig1376.2247.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	718

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1376.2247.1 vs. uniprot
Match: A0A6H5KLG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG8_9PHAE)

HSP 1 Score: 782 bits (2019), Expect = 2.250e-278
Identity = 406/476 (85.29%), Postives = 426/476 (89.50%), Query Frame = 0

Query:    1 YCSRFSVKTKQRSPYLAVLSGTMNIAWVATVFAQMATRSAGRAFPCGVTVTLSHLYVLLCVLPLMLRESGDSAIFATRISPTITKSPLVATGGTRYRNSPYTATARTSTFSLTHESNTEETXXXADSSSDDGRPSAQRTLRAKFAAVALVVVIGAFTALLIGESGRSWSIRGRVRDGACLPLESWHVLASWAACVMINACAYATTVEPEKIDPRTGKPRRKRRARQRGASVADGATGTAPRDAVTLQAPCLWHCGRRRQSCFLRGEKLLTVMVSSSFGGVYFALLWRQPNLTVGQEERLLLLLVVMNATLLLSTFWLGTRDWMTRRRPIGIADFAKLQRKWGTTKNIMRNANMAAMLRDATKAHFCEELYKFLAAFQQFESMNIDEAGDCGAGSSGDSLASSSSVHSHAHSRRLRPSIFSLRTEQPSQQLQPVEQHCAYQVPRYSEYLGILGEFFTPGCRHEVNVSSETRCQVAKA 476
            + SRFS KTKQRSPYLAVLSGTMN+AWV   FAQMATRSA RAFPCG+T TLSHLYVLLC LPLMLR+SGDSAIFATR+SPT TKSPLVATGG RYRN PYTA  RTST SL HE +TE+T   AD SSDD RPSAQ  LRAK AAVALVVVIGAF ALLIG SG SWSIRGR RDGACLPLESWHVLASWAACVMI+ACAYATT EP+KIDPRTGKP  KR ARQRGASVAD ATGTAPRDAVTL  P LW CGRRRQSCFLRGEKLLTVMVSSSFGGVYFALLWRQPNLT+GQEERLLLLLVVMNA+LLLSTFWL TRDWM+RR PIG+ADF KLQ+KWG+TKNIM NAN+AA  R+A KAHFCEELYKFLAAFQQFESMNIDEAGD GAGSSGDS AS SSVHSH +SRR RPSIFSLR EQPSQQLQPVEQHCAYQVPRYSEYLG+LGEFFTPGCRHEVNVSSETRCQVA+A
Sbjct:   28 WASRFSAKTKQRSPYLAVLSGTMNVAWVVAAFAQMATRSAERAFPCGITATLSHLYVLLCTLPLMLRQSGDSAIFATRVSPTSTKSPLVATGGRRYRNGPYTAMVRTSTASLPHEPSTEKTSCEADISSDDERPSAQLALRAKLAAVALVVVIGAFMALLIGGSGGSWSIRGRDRDGACLPLESWHVLASWAACVMIDACAYATTSEPDKIDPRTGKPLGKRGARQRGASVADEATGTAPRDAVTLHEPRLWPCGRRRQSCFLRGEKLLTVMVSSSFGGVYFALLWRQPNLTMGQEERLLLLLVVMNASLLLSTFWLSTRDWMSRR-PIGVADFTKLQKKWGSTKNIMGNANVAAKFREAAKAHFCEELYKFLAAFQQFESMNIDEAGDRGAGSSGDSPASCSSVHSHVNSRRFRPSIFSLRAEQPSQQLQPVEQHCAYQVPRYSEYLGMLGEFFTPGCRHEVNVSSETRCQVAQA 502

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1376.2247.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1376.2247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KLG8_9PHAE	2.250e-278	85.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 526..553
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 299..318
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..66
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 319..717
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 205..267
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 67..143
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 166..184
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 288..298
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..36
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 144..165
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 268..287
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 185..204
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 37..41
None	No IPR available	TMHMM	TMhelix		coord: 268..286
None	No IPR available	TMHMM	TMhelix		coord: 144..163
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 299..318
None	No IPR available	TMHMM	TMhelix		coord: 44..66
None	No IPR available	TMHMM	TMhelix		coord: 184..206
IPR016137	RGS domain	PFAM	PF00615	RGS	coord: 345..523 e-value: 3.3E-6 score: 27.4
IPR036305	RGS domain superfamily	SUPERFAMILY	48097	Regulator of G-protein signaling, RGS	coord: 346..523

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1376	contig	E-siliculosus-1a_F_contig1376:17431..29424 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1376.2247.1	mRNA_E-siliculosus-1a_F_contig1376.2247.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1376 17431..29424 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1376.2247.1 ID=prot_E-siliculosus-1a_F_contig1376.2247.1|Name=mRNA_E-siliculosus-1a_F_contig1376.2247.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=718bp
YCSRFSVKTKQRSPYLAVLSGTMNIAWVATVFAQMATRSAGRAFPCGVTV
TLSHLYVLLCVLPLMLRESGDSAIFATRISPTITKSPLVATGGTRYRNSP
YTATARTSTFSLTHESNTEETSSEADSSSDDGRPSAQRTLRAKFAAVALV
VVIGAFTALLIGESGRSWSIRGRVRDGACLPLESWHVLASWAACVMINAC
AYATTVEPEKIDPRTGKPRRKRRARQRGASVADGATGTAPRDAVTLQAPC
LWHCGRRRQSCFLRGEKLLTVMVSSSFGGVYFALLWRQPNLTVGQEERLL
LLLVVMNATLLLSTFWLGTRDWMTRRRPIGIADFAKLQRKWGTTKNIMRN
ANMAAMLRDATKAHFCEELYKFLAAFQQFESMNIDEAGDCGAGSSGDSLA
SSSSVHSHAHSRRLRPSIFSLRTEQPSQQLQPVEQHCAYQVPRYSEYLGI
LGEFFTPGCRHEVNVSSETRCQVAKARTSLRCFCDWVASSENDKRILFKK
AVHEVRMMLDQNIMGSFIHSPSFAGVARDLMKVKSAQDEIAAEEEEKRLA
AKKRMKTRIQAITLANSVRRTWVSAVSERSDTDEGARGGGADTQDNPSTS
TSGAGSAPIVPLRLRTITIGALAAGRLTTAGETAENGGSLQGSTQPLEAA
LVVSTAPLSTSAPSPGSSPRTEPRRPLSFRTAVQAALATSSRSPSARVAV
SPPSSPVQPERGAEPAD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036305	RGS_sf
IPR016137	RGS