Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A6H5KWK2_9PHAE (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK2_9PHAE)
HSP 1 Score: 379 bits (973), Expect = 1.910e-126
Identity = 198/239 (82.85%), Postives = 207/239 (86.61%), Query Frame = 2
Query: 77 MAFEWAEADIPKLLMGVIFCALIWPQPMQVSAFLRQSLNRATAQERERTAALQALHERQETETIREGEHATAAGRRTGATTATASTAARAEKAILPQPQSRGTKGAPSSRSPXXXXXXEILPLTTLGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK 793
M FEWA+AD+P LLMGVIFCAL+WPQ MQVSAFLRQS+NRATAQERERTAALQAL +R+E ET REGEHATAAGRRTGATT AILPQ XXXXXXEILPLT+LGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSH+LVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVC+
Sbjct: 1 MVFEWAKADVPTLLMGVIFCALMWPQLMQVSAFLRQSVNRATAQERERTAALQALRKRKEVETQREGEHATAAGRRTGATTXXXXXXXXXXXAILPQXXXXXXXXXXXXXXXXXXXXXEILPLTSLGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHNLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCE 239
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
D8LQD7_ECTSI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD7_ECTSI)
HSP 1 Score: 387 bits (995), Expect = 1.270e-123
Identity = 206/240 (85.83%), Postives = 208/240 (86.67%), Query Frame = 2
Query: 77 MAFEWAEADIPKLLMGVIFCALIWPQPMQVSAFLRQSLNRATAQERERTAALQALHERQETETIREGEHATAAGRRTGATTATASTAARAEKAI-LPQPQSRGTKGAPSSRSPXXXXXXEILPLTTLGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK 793
M FEWA+ADIP LLMGVIFCALIWPQ MQVSAFLRQSL RATAQERERT LQALHERQE ET REGEHATAAGRRTGATTA EKAI LPQ XXXXXXEILPLTTLGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVC+
Sbjct: 1 MTFEWAKADIPNLLMGVIFCALIWPQLMQVSAFLRQSLYRATAQERERTVTLQALHERQEAETQREGEHATAAGRRTGATTAXXXXXXXXEKAIILPQXXXXXXXXXXXXXXXXXXXXXEILPLTTLGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCE 240
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A843VWT7_COLES (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VWT7_COLES)
HSP 1 Score: 125 bits (313), Expect = 4.540e-29
Identity = 59/115 (51.30%), Postives = 74/115 (64.35%), Query Frame = 2
Query: 515 LPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK*FSFKRRIA-MFAQELQQIPSV 856
LP A P + RLLVCHD+AGGY DR VQGG Y + W L+D+FVYF+HDLVT+P W + AH HG RVLGTFITEWDKG D+CK A ++A+ L ++ +
Sbjct: 80 LPAGAGAGLPPRRRLLVCHDMAGGYQDDRWVQGGANPDAYAIWHWHLMDVFVYFAHDLVTLPPPCWTNAAHSHGVRVLGTFITEWDKGKDICKTLLASNEFARLYAERLAELAAA 194
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A452YWH8_AEGTS (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452YWH8_AEGTS)
HSP 1 Score: 121 bits (303), Expect = 1.600e-28
Identity = 57/116 (49.14%), Postives = 74/116 (63.79%), Query Frame = 2
Query: 512 PLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK*-FSFKRRIAMFAQELQQIPSV 856
PLP AP PP + RLLVCHD GGY D QGG Y + W L+D+FVYFSH LVT+P W + AH HG +VLGTFITEWDKG ++C+ F+ + M+A+ L ++ +
Sbjct: 69 PLPSPGAPLPP-RRRLLVCHDFQGGYRDDAAPQGGANPDAYALWHWHLVDVFVYFSHYLVTLPPPCWTNAAHLHGVKVLGTFITEWDKGAEICREMFATQDSAQMYAERLAELAAA 183
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A7I8K5M0_SPIIN (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K5M0_SPIIN)
HSP 1 Score: 125 bits (313), Expect = 2.330e-28
Identity = 61/113 (53.98%), Postives = 76/113 (67.26%), Query Frame = 2
Query: 512 PLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVC-K*FSFKRRIAMFAQELQQI 847
PL AA P + RLLVCHD+AGGYG D+ VQGG Y + W L+D+FVYFSH+LVT+P W++ AH HG +VLGTFITEWD+G VC K S K M+A+ L +I
Sbjct: 43 PLSTAAAGGLPPRRRLLVCHDMAGGYGDDKWVQGGSNPDAYAIWHWHLMDVFVYFSHNLVTLPPPCWMNAAHTHGVKVLGTFITEWDEGRAVCRKLLSSKDSARMYAERLVEI 155
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A444X1Z7_ARAHY (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=2 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444X1Z7_ARAHY)
HSP 1 Score: 117 bits (292), Expect = 4.380e-28
Identity = 55/101 (54.46%), Postives = 68/101 (67.33%), Query Frame = 2
Query: 548 KSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK*F-SFKRRIAMFAQELQQI 847
+ RLLVCHD+AGGY D+ VQGG Y + W LID+FVYFSH+LVTIP W + AHRHG +VLGTFITEWD+G C S K M+A+ L ++
Sbjct: 73 RRRLLVCHDMAGGYLDDKWVQGGTNPDAYAIWHWHLIDVFVYFSHNLVTIPPPCWTNTAHRHGVKVLGTFITEWDEGRAACDVLLSTKESAQMYAERLVEL 173
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A834WGT6_9FABA (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WGT6_9FABA)
HSP 1 Score: 124 bits (311), Expect = 4.510e-28
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 2
Query: 365 QPQSRGTKGAPSSRSPXXXXXXEILPLTTLGELLSYEGPGWGQGF-----APARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK*F-SFKRRIAMFAQELQQIPSV 856
+PQS+ + P P P+ TL EL E + F + P+ +P P + R+LVCHD+AGGY D+ +QGG Y + W LID+FVYFSH+LVT+P GW + HRHG +VLGTFITEWD+G VC S K M+A+ L ++ +
Sbjct: 5 EPQSQQSASDPPEFDPTQPSVPISYPIKTLHEL---ESRSYFDSFHYPFNKASVPIQSGGSPSLPNRRRMLVCHDMAGGYTDDKWIQGGTNADAYAIWHWHLIDVFVYFSHNLVTLPPPGWTNTGHRHGVKVLGTFITEWDEGRAVCNTMLSTKESSQMYAERLAELAAA 171
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A1Y1HJR8_KLENI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HJR8_KLENI)
HSP 1 Score: 124 bits (310), Expect = 7.130e-28
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 2
Query: 548 KSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK 793
+ RLLVCHDL GGY D+L+QGG YR + W LID+FVYFSH LVTIP AGW D AHRH +VLGTFITEWD G +C+
Sbjct: 77 RPRLLVCHDLQGGYEDDKLLQGGSNSNAYRIWHWRLIDVFVYFSHHLVTIPPAGWTDAAHRHDVKVLGTFITEWDAGAAICR 158
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
L5MJW7_MYODS (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=2 Tax=Myotis davidii TaxID=225400 RepID=L5MJW7_MYODS)
HSP 1 Score: 123 bits (309), Expect = 8.660e-28
Identity = 63/120 (52.50%), Postives = 76/120 (63.33%), Query Frame = 2
Query: 443 LTTLGELLSYEGPGWGQGFAPAR-PLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCK*F 799
L++L ELL++ PG GF+ A P P + R L+CHD+ GGY DR +QG G PY Y W IDIFVYFSH LVTIP GW + AHRHG RVLGTFITEW +G +C+ F
Sbjct: 70 LSSLEELLAWT-PGAEDGFSVALVPAQDRQPPLSSRRPRTLLCHDMMGGYLDDRFIQGSGVRSPYTFYHWQYIDIFVYFSHHLVTIPPVGWTNAAHRHGVRVLGTFITEWKEGGQLCEAF 188
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Match:
A0A6A4MAZ7_9ERIC (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4MAZ7_9ERIC)
HSP 1 Score: 116 bits (290), Expect = 1.230e-27
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 2
Query: 548 KSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKG-YDVCK*FSFKRRIAMFAQELQQIPSV 856
+ R+LVCHD+AGGY D+ VQGG Y + W L+D+FVYFSHDLVT+P W + AH+HG +VLGTFITEWD+G K + K M+A+ L ++ S
Sbjct: 67 RPRMLVCHDMAGGYTDDKWVQGGSNPEAYAIWHWYLMDVFVYFSHDLVTLPPPCWTNAAHKHGVKVLGTFITEWDEGRVHANKLLATKESARMYAERLTELASA 170
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10255.224.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.91e-126 / Id = 82.85 Expect = 1.27e-123 / Id = 85.83 Expect = 4.54e-29 / Id = 51.30 Expect = 1.60e-28 / Id = 49.14 Expect = 2.33e-28 / Id = 53.98 Expect = 4.38e-28 / Id = 54.46 Expect = 4.51e-28 / Id = 40.00 Expect = 7.13e-28 / Id = 64.63 Expect = 8.66e-28 / Id = 52.50 Expect = 1.23e-27 / Id = 50.00 Sequence A0A6H5KWK2_9PHAE D8LQD7_ECTSI A0A843VWT7_COLES A0A452YWH8_AEGTS A0A7I8K5M0_SPIIN A0A444X1Z7_ARAHY A0A834WGT6_9FABA A0A1Y1HJR8_KLENI L5MJW7_MYODS A0A6A4MAZ7_9ERIC Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 720 Model size 928 Exons 3 Hectar predicted targeting category chloroplast BRITE ko00000,ko00001,ko01000,ko04131 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. G EC 3.2.1.96 EggNOG OGs COG4724@1,KOG2331@2759 EggNOG free text desc. mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity GOs GO:0000270,GO:0000323,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005829,GO:0005975,GO:0006022,GO:0006026,GO:0006027,GO:0006457,GO:0006464,GO:0006491,GO:0006517,GO:0006807,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009253,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0015929,GO:0016052,GO:0016231,GO:0016787,GO:0016798,GO:0017022,GO:0019538,GO:0030203,GO:0033925,GO:0035821,GO:0036211,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044033,GO:0044035,GO:0044040,GO:0044041,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044278,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051672,GO:0051704,GO:0051707,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 KEGG Pathway ko00511,map00511 KEGG ko ko:K01227,ko:K20308 Preferred name ENGASE Seed eggNOG ortholog 2880.D8LQD7 Seed ortholog evalue 7e-106 Seed ortholog score 390.2 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10255.224.1
>prot_E-siliculosus-1a_F_contig10255.224.1 ID=prot_E-siliculosus-1a_F_contig10255.224.1|Name=mRNA_E-siliculosus-1a_F_contig10255.224.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=240bp
MAFEWAEADIPKLLMGVIFCALIWPQPMQVSAFLRQSLNRATAQERERTA back to top mRNA from alignment at E-siliculosus-1a_F_contig10255:747..2237-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10255.224.1 ID=mRNA_E-siliculosus-1a_F_contig10255.224.1|Name=mRNA_E-siliculosus-1a_F_contig10255.224.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1491bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10255:747..2237- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CTTCTGCCAACCTCCATCGCGCCAGGCACAAACTCCGCATCTGTAGGCAC
CAGTTGCCGTGGGGATACAGAGAGCC ATGGCGTTCGAGTGGGCCGAGGCG
GATATCCCAAAGCTGCTGATGGGCGTGATATTTTGCGCGTTGATTTGGCC
GCAACCCATGCAAGTGTCTGCTTTTTTGCGACAATCGCTGAATCGGGCAA
CCGCCCAGGAGCGGGAGAGAACGGCCGCGCTACAGGCCCTACATGAGAG G
TAAGGGTGCTGCGTCCGTCTTGGTGAAATGTTGTCACAGAGGCGCTTCGA
CGTTGCTGCGGCGGCAACAAGCCAGACCGATCAAGAGGCAGAAGAGAGAA
GAGGGGCGAGAATTGTGCCGCACTGCTACCAGTACAGTCTACTAGACTGC
ACATATCCTTGTCCGCGCTTTGAATACTCCACAACCACCGCACTGCGCTG
CCATTGGATCGCTAAATGCCCTGCCGGTGCCAGGCAAGAAACGGAAACTA
TACGGGAAGGAGAACATGCCACCGCGGCAGGTCGCAGAACCGGCGCCACC
ACCGCCACCGCCTCCACCGCAGCACGTGCGGAGAAAGCGATCCTGCCACA
ACCACAGTCGAGGGGGACCAAGGGCGCCCCCTCATCACGATCACCATCAC
CGTCTCCATCTCCGGAGATCCTCCCGCTGACAACGCTGGGAGAGCTTCTG
AGCTACGAGGGGCCCGGGTGGGGCCAGGGGTTCGCTCCTGCTCGCCCCCT
GCCTTTCGTCGCTGCCCCCTTCCCTCCCTTGAAGAGCAGGCTGTTGGTGT
GCCACGACCTTGCGGGGGGTTACGGGCAGGACAGGTTGGTCCAGGGCGGC
GGATACGACCGGCCGTATCGGGCGTACGACTGGGGCCTGATCGACATCTT
CGTGTACTTCAG GTGGGTTTGTCGTACGTGTACATTGCATAAGAGGTCGC
ACGTGTTCTCGTAGTTTTAATTTTTCAATAGGTGTGTTGCATCTCCGACA
CGTCGATACGTTGGGCTTCTAGAGATGTCTGGGATCCCGCCGCGTGTGTG
TGTGTGTGTTGGGTTTCGTTCTTGGGGTCGTCGGGCACACACTTATACAC
ACGTCATACGTTGAGCTTACCTATGGGTCTTTCAAAGTGAGTGGTATCTT
CTTTCCTCTCCGGAATAATCTGACCCTACTCGACCTTGCTCCTGCAATAT
CCCGAACCCAACTACACTTGGTCAATGTACGCATCATGCAGCCACGACTT
GGTGACGATCCCAACGGCGGGCTGGATCGACGTGGCCCACAGGCACGGCA
CGCGGGTCCTCGGGACTTTCATCACCGAGTGGGACAAGGGTTACGACGTG
TGTAAGTGA TTTTCGTTCAAGCGACGCATTGCTATGTTTGCGCAAGAACT
TCAACAGATTCCATCGGTGGGGCAGGCGGTAGGTTCGTGTGCGCCCGGTT
TTGGTCCATCAACTTCCGACGAGATGTGACAAACTGATCCA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10255:747..2237-
>mRNA_E-siliculosus-1a_F_contig10255.224.1 ID=mRNA_E-siliculosus-1a_F_contig10255.224.1|Name=mRNA_E-siliculosus-1a_F_contig10255.224.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1440bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10255:747..2237- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top