mRNA_E-siliculosus-1a_F_contig136.2150.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig136.2150.1
Unique NamemRNA_E-siliculosus-1a_F_contig136.2150.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: D7FPK2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK2_ECTSI)

HSP 1 Score: 831 bits (2146), Expect = 3.370e-291
Identity = 454/478 (94.98%), Postives = 462/478 (96.65%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTAAQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPDQTAAAAGGDGFFVADISGEDDKGTSTPAATANQGESKKVPKRGKGKAGXXXXXXERGGEEALGDGGGGVAVKVTPLAGVLPRLVAETFATLKHRVAQCAFVVWVSVVAVSIPVAPQVATDSSGVVENLLPPVDSPPVFGDSSSVVREGNTSDMKKNEGEPDVTSPAPTEAENRWGRAIAASSPQEVMRIVKDARSRAMSSPEEGGSGNSQEVRKDRHFLSRIRVELVNRSTSEASSCEMVIVELAEEMPGEAWPAAVADTVRAHAAATVVNTNKADRADGLSGMVRSCLADTAKVVTILCVSPADNHADKTEKTLSFGKACENSGEDGAAQLKDLKKELARLKKEAKGTKKTATSQLPRPAGGKR 1434
            LHNQIEDMKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLT AQQHWTFTHVFQNASAEVAAT AAQAELHKEVAGLGT+LADGHNVLLMAVGASRSGKTLALVGEPDQTAAAAGGDGFF+AD+SGED KGT+TPAATANQGESKKVPKRGKGKAG XXXXXERGGEEALGDGGGGVAVKVTPLAGV PRLVAETFATLKHRVAQCAFVVWVSVVAVSIPVAPQVATDSSGVVENLLPPVDSPPV GDSSSVVREG+ SD KKNE EPDVTSPAPTE ENRWGRA+AASSPQEVMRIV DARSRAMSSPE  GSGNSQE RKDRHFLSRIRVELVNRSTSEASSCEMVIVELAEEMPGEAWPAA+ADTVRAHAAAT+VNTNKADRADGL GMVRSCLADTAKVVTILCVSPADNHADKTEKTLSFGKACENSGEDGAAQLKDLKKELARLKKEAKGTKKTA SQLPRPAGGKR
Sbjct:  730 LHNQIEDMKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTTAQQHWTFTHVFQNASAEVAATAAAQAELHKEVAGLGTTLADGHNVLLMAVGASRSGKTLALVGEPDQTAAAAGGDGFFIADMSGEDGKGTATPAATANQGESKKVPKRGKGKAGSXXXXXERGGEEALGDGGGGVAVKVTPLAGVFPRLVAETFATLKHRVAQCAFVVWVSVVAVSIPVAPQVATDSSGVVENLLPPVDSPPVCGDSSSVVREGDISDKKKNEEEPDVTSPAPTEGENRWGRAVAASSPQEVMRIVMDARSRAMSSPEAEGSGNSQEERKDRHFLSRIRVELVNRSTSEASSCEMVIVELAEEMPGEAWPAALADTVRAHAAATIVNTNKADRADGLPGMVRSCLADTAKVVTILCVSPADNHADKTEKTLSFGKACENSGEDGAAQLKDLKKELARLKKEAKGTKKTAPSQLPRPAGGKR 1207
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A6H5L077_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L077_9PHAE)

HSP 1 Score: 803 bits (2074), Expect = 3.480e-280
Identity = 442/478 (92.47%), Postives = 455/478 (95.19%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTAAQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPDQTAAAAGGDGFFVADISGEDDKGTSTPAATANQGESKKVPKRGKGKAGXXXXXXERGGEEALGDGGGGVAVKVTPLAGVLPRLVAETFATLKHRVAQCAFVVWVSVVAVSIPVAPQVATDSSGVVENLLPPVDSPPVFGDSSSVVREGNTSDMKKNEGEPDVTSPAPTEAENRWGRAIAASSPQEVMRIVKDARSRAMSSPEEGGSGNSQEVRKDRHFLSRIRVELVNRSTSEASSCEMVIVELAEEMPGEAWPAAVADTVRAHAAATVVNTNKADRADGLSGMVRSCLADTAKVVTILCVSPADNHADKTEKTLSFGKACENSGEDGAAQLKDLKKELARLKKEAKGTKKTATSQLPRPAGGKR 1434
            LHNQIED KGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTA QQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGT+LADGHNVLLMAVGASRSGKTLALVGEPDQTAA AGGDGFF ADISGED+K T+TPAATA+QGESKKVPKRGKGK GXXXXXXERG E ALGDGGGGVAVKVTPLAGV PRLVAETFATLKHRVAQCAFVVWVSVVAVSIPVAPQVATDSSGVVE+LLPPVDSPPV GDSSSVVREG+TSD KKNEGEP+ TSPAPTE ENRWGR IAASSPQEVMRIV DARSRAMSSPE GGSGNS+EVRKDRHFLSRIRVELVNRST EASSCEMVIVEL EEMPGEAWPAA+ADTVR HAAATVVNTNKA RADGL GMVRSCLADTAKVVTILCVSPADN+ADKTEKTLSFGKACENSGE+GAAQLKDLKKELARLKKEA GT+KTA +QLPRPAGGKR
Sbjct:  740 LHNQIEDTKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTAVQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTTLADGHNVLLMAVGASRSGKTLALVGEPDQTAAGAGGDGFFFADISGEDEKRTATPAATASQGESKKVPKRGKGKVGXXXXXXERGNEGALGDGGGGVAVKVTPLAGVFPRLVAETFATLKHRVAQCAFVVWVSVVAVSIPVAPQVATDSSGVVESLLPPVDSPPVCGDSSSVVREGDTSDNKKNEGEPNATSPAPTEGENRWGREIAASSPQEVMRIVMDARSRAMSSPEAGGSGNSREVRKDRHFLSRIRVELVNRSTREASSCEMVIVELVEEMPGEAWPAALADTVRTHAAATVVNTNKAYRADGLPGMVRSCLADTAKVVTILCVSPADNYADKTEKTLSFGKACENSGENGAAQLKDLKKELARLKKEATGTRKTAPTQLPRPAGGKR 1217
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A482SJA1_9ARCH (Kinesin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJA1_9ARCH)

HSP 1 Score: 68.2 bits (165), Expect = 8.640e-9
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTA----AQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPD 339
            LHN +ED+KG+ R+Y RVRPM   E++ GC E  ++DGK ++ +       A++ + F  VF   + E      +Q ++ K+   L  S+ DG+NV + A G + +GK+  ++G  D
Sbjct:  147 LHNDMEDLKGKIRVYVRVRPMSNSERDRGCIEAVVKDGKMSVLVKGVGGPDAKKFYDFDQVFGGPATE----GNSQVDVFKDTKHLMMSVVDGYNVCIFAYGQTGAGKSYTMIGAAD 259
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A7S1XRH5_9STRA (Kinesin-like protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRH5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.460e-7
Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRPMDALEKEAGC-KEVCLR---DGKQTLALLTAAQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPD 339
            LHN +++++G  R+Y RVRP + +E E G   E+C     +G+  L       + W F  VF   S         Q +++KEV+GL TS+ DG+NV + A G + SGKT  + G P+
Sbjct:  390 LHNLVQELRGNIRVYCRVRPPNRMELEQGNGAEICATFPGEGEVALQNERGKAKKWEFDQVFDFNST--------QPQVYKEVSGLVTSVLDGYNVCIFAYGQTGSGKTYTMEGPPE 498
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A835YP16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP16_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.070e-7
Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 1 
Query: 1090 EAWPAAVADTVRAHAAATVV--------NTNKADRADGLSGMVRSCLADTAKVVTILCVSPADNHADKTEKTLSFGKACENSGEDGAAQ--LKDLKKELARLK 1368
            E W  A++  + AHAAA                D A G++  +R  L +TAKVVT++C+SPA +H   TE+ L  G+AC  +G        L++LK+ELARLK
Sbjct: 1535 ERWGGALSRIISAHAAAATELPRVDEESGVGADDAAVGVARALREFLTETAKVVTLICISPAASHTLATERALRLGEACRAAGXXXXXXXXLRELKRELARLK 1637
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A7S1XPD2_9STRA (Kinesin-like protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPD2_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.490e-7
Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRPMDALEKEAGC-KEVCLR---DGKQTLALLTAAQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPD 339
            LHN +++++G  R+Y RVRP + +E E G   E+C     +G+  L       + W F  VF   S         Q +++KEV+GL TS+ DG+NV + A G + +GKT  ++G  D
Sbjct:  390 LHNLVQELRGNIRVYCRVRPPNRMELEQGNGAEICATFPGEGEVALQNERGKAKKWEFDQVFDFNST--------QPQVYKEVSGLVTSVLDGYNVCIFAYGQTGAGKTFTMMGPHD 498
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A7J6QZ82_PEROL (Kinesin-like protein (Fragment) n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QZ82_PEROL)

HSP 1 Score: 59.7 bits (143), Expect = 6.120e-6
Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRPMDALEKEAG---CKEVCLRDGKQTLALLTAAQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPDQ 342
            LHN++++++G  R++ RVRP+  LEKE G   C E    D  Q L       + W F  VF +         A QA++  E+  L TS  DG+NV L A G + SGKT  + G  D+
Sbjct:   75 LHNKVQELRGNIRVFVRVRPL--LEKERGEGRCVEFPEVDSVQVLNQELQTAKRWEFDKVFTD--------KAGQADVFSELQPLITSALDGYNVCLFAYGQTGSGKTHTMQGTSDE 181
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A7S0U2Q0_HEMAN (Kinesin-like protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U2Q0_HEMAN)

HSP 1 Score: 59.7 bits (143), Expect = 7.370e-6
Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 1 
Query:    4 HNQIEDMKGQTRMYARVRPMDALEKEAGCKEVC--LRDGKQTLALLTAAQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPD 339
            +NQIEDMKG+ R+YAR RP    EKE  C++    L D    + +    ++ +TF  VF+  S         Q ++ + V+ L  S  DG+NV + A G + SGKT  + G+ D
Sbjct:  107 YNQIEDMKGKIRVYARCRPFAKYEKEKNCQQAVKFLDDMSCEVDVGKKGKKEFTFDEVFREDSR--------QEQIFEGVSHLVQSAVDGYNVCVFAYGQTGSGKTFTMYGKAD 212
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A7J6MJX2_PERCH (Kinesin-like protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MJX2_PERCH)

HSP 1 Score: 59.7 bits (143), Expect = 8.290e-6
Identity = 38/114 (33.33%), Postives = 57/114 (50.00%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTAAQQHWTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPDQ 342
            LHN++++++G  R++ RVRP+   EK+  C      D  Q         + W F  VF +         A QA++  EV  L  S  DG+NV + A G + SGKT  + G P+Q
Sbjct:  317 LHNKVQELRGNIRVFVRVRPLLEREKDGSCTSCPDIDTVQIFNHDMGTAKKWEFDRVFND--------KAGQADVFSEVKPLVVSAMDGYNVCIFAYGQTGSGKTHTMQGTPEQ 422
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BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Match: A0A7S1T9W5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9W5_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 1.790e-5
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:    1 LHNQIEDMKGQTRMYARVRP-MDALEKEAGCKEVCLRDGKQTLALLTAAQQH-WTFTHVFQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLALVGEPD 339
            LHN ++DMKG  R++ARVRP +  +E   GC  VC R+  ++L L  A ++H + F  +F        A +++Q+++  E +    S  DG++V L + G + SGKT  + G  D
Sbjct:  727 LHNTVQDMKGNVRVFARVRPVLCTVEAPEGCI-VCPRETAESLVLTHAGEKHSFIFDRIF--------AASSSQSDVFSETSDFIQSALDGYHVCLFSYGQTGSGKTFTMEGRGD 832
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig136.2150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FPK2_ECTSI3.370e-29194.98Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5L077_9PHAE3.480e-28092.47Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A482SJA1_9ARCH8.640e-934.19Kinesin motor domain-containing protein n=1 Tax=ar... [more]
A0A7S1XRH5_9STRA2.460e-735.90Kinesin-like protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A835YP16_9STRA7.070e-738.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XPD2_9STRA7.490e-735.04Kinesin-like protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7J6QZ82_PEROL6.120e-636.75Kinesin-like protein (Fragment) n=2 Tax=Perkinsus ... [more]
A0A7S0U2Q0_HEMAN7.370e-635.96Kinesin-like protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7J6MJX2_PERCH8.290e-633.33Kinesin-like protein n=1 Tax=Perkinsus chesapeaki ... [more]
A0A7S1T9W5_9RHOD1.790e-534.78Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig136contigE-siliculosus-1a_F_contig136:57406..59757 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1419
Model size1440
Exons4
Ec32 orthologEc-12_000900.2
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04812
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.Z
EggNOG OGsCOG0666@1,COG5059@1,KOG0239@2759,KOG4177@2759
EggNOG free text desc.microtubule motor activity
KEGG koko:K10406
Seed eggNOG ortholog2880.D7FPK2
Seed ortholog evalue1.1e-238
Seed ortholog score832.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig136.2150.1prot_E-siliculosus-1a_F_contig136.2150.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig136 57427..59757 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927876.5681183-UTR-E-siliculosus-1a_F_contig136:57405..574261622927876.5681183-UTR-E-siliculosus-1a_F_contig136:57405..57426Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig136 57406..57426 +
1696318718.9513521-UTR-E-siliculosus-1a_F_contig136:57405..574261696318718.9513521-UTR-E-siliculosus-1a_F_contig136:57405..57426Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig136 57406..57426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927876.5856123-CDS-E-siliculosus-1a_F_contig136:57426..575011622927876.5856123-CDS-E-siliculosus-1a_F_contig136:57426..57501Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 57427..57501 +
1696318718.9638157-CDS-E-siliculosus-1a_F_contig136:57426..575011696318718.9638157-CDS-E-siliculosus-1a_F_contig136:57426..57501Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 57427..57501 +
1622927876.5966244-CDS-E-siliculosus-1a_F_contig136:57766..588911622927876.5966244-CDS-E-siliculosus-1a_F_contig136:57766..58891Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 57767..58891 +
1696318718.9722655-CDS-E-siliculosus-1a_F_contig136:57766..588911696318718.9722655-CDS-E-siliculosus-1a_F_contig136:57766..58891Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 57767..58891 +
1622927876.6078835-CDS-E-siliculosus-1a_F_contig136:59186..593021622927876.6078835-CDS-E-siliculosus-1a_F_contig136:59186..59302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 59187..59302 +
1696318718.9806395-CDS-E-siliculosus-1a_F_contig136:59186..593021696318718.9806395-CDS-E-siliculosus-1a_F_contig136:59186..59302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 59187..59302 +
1622927876.6240053-CDS-E-siliculosus-1a_F_contig136:59654..597571622927876.6240053-CDS-E-siliculosus-1a_F_contig136:59654..59757Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 59655..59757 +
1696318718.9901073-CDS-E-siliculosus-1a_F_contig136:59654..597571696318718.9901073-CDS-E-siliculosus-1a_F_contig136:59654..59757Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig136 59655..59757 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig136.2150.1

>prot_E-siliculosus-1a_F_contig136.2150.1 ID=prot_E-siliculosus-1a_F_contig136.2150.1|Name=mRNA_E-siliculosus-1a_F_contig136.2150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=473bp
MKGQTRMYARVRPMDALEKEAGCKEVCLRDGKQTLALLTAAQQHWTFTHV
FQNASAEVAATTAAQAELHKEVAGLGTSLADGHNVLLMAVGASRSGKTLA
LVGEPDQTAAAAGGDGFFVADISGEDDKGTSTPAATANQGESKKVPKRGK
GKAGGGGGGGERGGEEALGDGGGGVAVKVTPLAGVLPRLVAETFATLKHR
VAQCAFVVWVSVVAVSIPVAPQVATDSSGVVENLLPPVDSPPVFGDSSSV
VREGNTSDMKKNEGEPDVTSPAPTEAENRWGRAIAASSPQEVMRIVKDAR
SRAMSSPEEGGSGNSQEVRKDRHFLSRIRVELVNRSTSEASSCEMVIVEL
AEEMPGEAWPAAVADTVRAHAAATVVNTNKADRADGLSGMVRSCLADTAK
VVTILCVSPADNHADKTEKTLSFGKACENSGEDGAAQLKDLKKELARLKK
EAKGTKKTATSQLPRPAGGKRS*
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mRNA from alignment at E-siliculosus-1a_F_contig136:57406..59757+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig136.2150.1 ID=mRNA_E-siliculosus-1a_F_contig136.2150.1|Name=mRNA_E-siliculosus-1a_F_contig136.2150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2352bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig136:57406..59757+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTCATAACCAGATCGAAGATATGAAGGGCCAGACACGAATGTATGCACG
AGTGCGCCCAATGGACGCTCTTGAGAAGGAGGCTGGATGCAAGGAGGTGT
GTAGTCACAGAAACTGTCAGTGAGCGCGATACACACGCTACGACCATGAA
GATAGGGCGAAGAACAAGACAAACCAACTTTTCTGGAAACGCATTTCGCA
AAACTTGCAGCCCAACGCGATTTCCTCGAACCCATCGATATCGATATTCC
TTCCGGGCCCATGCCGATCACTTTGTCCGGCTCTCCCGCCCTGCTGTGCT
GACTACCTTGGAATGACAACGGTCCTCTTCGGTTATTCTGGCGCTGTCCC
GAACAAATCAGGTGTGCCTGCGAGATGGTAAGCAGACACTGGCCCTCCTC
ACGGCGGCACAGCAGCATTGGACGTTTACGCACGTCTTCCAAAATGCGTC
GGCCGAGGTAGCGGCGACTACAGCGGCGCAGGCAGAGCTGCACAAGGAAG
TTGCGGGGCTGGGGACATCGCTCGCGGACGGTCACAACGTCCTTCTCATG
GCCGTGGGCGCTTCCCGGTCGGGAAAGACGCTGGCGCTTGTAGGAGAACC
TGACCAGACAGCGGCAGCCGCAGGGGGTGACGGTTTCTTCGTTGCGGACA
TTTCGGGCGAGGATGACAAAGGGACGTCGACGCCTGCAGCAACGGCGAAT
CAAGGCGAATCCAAGAAAGTTCCGAAAAGGGGCAAGGGGAAGGCCGGTGG
CGGCGGTGGAGGGGGCGAGCGCGGGGGCGAGGAGGCGTTAGGCGATGGTG
GGGGGGGGGTTGCTGTCAAGGTGACACCCTTGGCCGGAGTGTTGCCGCGA
CTGGTGGCAGAAACGTTCGCGACGCTGAAGCATCGCGTCGCGCAGTGCGC
TTTTGTTGTTTGGGTCAGCGTCGTCGCGGTTTCAATACCTGTGGCGCCAC
AGGTAGCTACTGACAGTAGCGGTGTGGTAGAGAACCTCCTACCTCCGGTG
GATTCACCGCCTGTGTTCGGCGATTCCTCCTCGGTGGTACGTGAAGGTAA
TACCTCTGATATGAAGAAGAACGAAGGGGAGCCAGACGTTACATCTCCCG
CCCCTACGGAAGCGGAAAATCGATGGGGACGCGCGATTGCGGCATCTTCA
CCACAAGAGGTGATGAGGATCGTCAAGGACGCTAGGTCTCGGGCGATGTC
GTCACCGGAGGAGGGGGGATCCGGAAATTCCCAAGAGGTGCGGAAAGACA
GACATTTCTTGTCTAGAATCCGAGTGGAGCTTGTGAACAGGAGCACAAGC
GAAGCCTCCTCATGTGAGATGGTTATCGTGGAGCTCGCGGAGGAGATGCC
AGGGGAGGCTTGGCCGGCGGCCGTGGCAGACACCGTGCGTGCTCACGCTG
CTGCGACCGTTGTGAATACCAACAAGGCGGACAGAGCGGACGGGCTCTCA
GGGATGGTCAGGAGTTGCCTCGCGGACACGGCCAAGGTTTGTGTGTATGT
GCATGGTATGAAACCGCTCTTCGCATTGCTCCTGCACATTCTCCTCAGAG
AAGATCATCGTTCACGATAAATCACTCTATTGGGCACATCGGCATCGGCA
CGCGCAAACCACGTAGTACTCGGAGGCTCAGCAAGTATTCTGGTGATGGG
AAACTCAGTTCGGAAGGAACATTGGTGCAAGCACCGTTGTCTCAATTAGC
CACTTAAATATTGTAGGGACATATCTCCCAAGATCATCATGAATTCTCCC
TCGGTGGCTACCGGATTGCTCCGTTCAACAGGTTGTGACAATCTTGTGCG
TAAGCCCAGCTGATAACCACGCGGACAAGACTGAGAAAACCCTCAGCTTC
GGGAAGGCCTGCGAAAACTCGGGCGAAGATGGTGCTGCGCAGCTCAAGTG
AGTGCTGATACATCCCGCCTTGTTTGTGCGTGTCTGAGCTCGCGAGGGAA
GCAGTATTGAGCAACGACCGACGGCCAATCCGCCAGTGAATTCCACGTTT
CCCAAACGCTGACCACGTGTGACCAATGGATATCTCAAACCGTGGACGGT
ACGTGTCTTGATTCTCTCGAGACGAAAAACAACTCGTGCATTCTCCTTGT
GTCTTACGACCTGCCTGCAACCGTGAAACTATCCACGAACTATAATTTTT
TCAAAATTGATTCCGGCACGATACACTGTATGAACAGTTGTGTATGTCAC
GCATTCTTATCCACTCTTTCGCCACCTGATTGTTCGTCTGTGCGGACAGG
GATCTCAAGAAAGAACTGGCTAGACTCAAGAAGGAGGCGAAGGGCACCAA
GAAAACGGCCACGTCTCAGCTTCCGCGTCCTGCTGGAGGGAAACGGTCAT
AG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig136:57406..59757+

>mRNA_E-siliculosus-1a_F_contig136.2150.1 ID=mRNA_E-siliculosus-1a_F_contig136.2150.1|Name=mRNA_E-siliculosus-1a_F_contig136.2150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2838bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig136:57406..59757+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGGGCCAGACACGAATGTATGCACGAGTGCGCCCAATGGACGCTCT
TGAGAAGGAGGCTGGATGCAAGGAGATGAAGGGCCAGACACGAATGTATG
CACGAGTGCGCCCAATGGACGCTCTTGAGAAGGAGGCTGGATGCAAGGAG
GTGTGCCTGCGAGATGGTAAGCAGACACTGGCCCTCCTCACGGCGGCACA
GCAGCATTGGACGTTTACGCACGTCTTCCAAAATGCGTCGGCCGAGGTAG
CGGCGACTACAGCGGCGCAGGCAGAGCTGCACAAGGAAGTTGCGGGGCTG
GGGACATCGCTCGCGGACGGTCACAACGTCCTTCTCATGGCCGTGGGCGC
TTCCCGGTCGGGAAAGACGCTGGCGCTTGTAGGAGAACCTGACCAGACAG
CGGCAGCCGCAGGGGGTGACGGTTTCTTCGTTGCGGACATTTCGGGCGAG
GATGACAAAGGGACGTCGACGCCTGCAGCAACGGCGAATCAAGGCGAATC
CAAGAAAGTTCCGAAAAGGGGCAAGGGGAAGGCCGGTGGCGGCGGTGGAG
GGGGCGAGCGCGGGGGCGAGGAGGCGTTAGGCGATGGTGGGGGGGGGGTT
GCTGTCAAGGTGACACCCTTGGCCGGAGTGTTGCCGCGACTGGTGGCAGA
AACGTTCGCGACGCTGAAGCATCGCGTCGCGCAGTGCGCTTTTGTTGTTT
GGGTCAGCGTCGTCGCGGTTTCAATACCTGTGGCGCCACAGGTAGCTACT
GACAGTAGCGGTGTGGTAGAGAACCTCCTACCTCCGGTGGATTCACCGCC
TGTGTTCGGCGATTCCTCCTCGGTGGTACGTGAAGGTAATACCTCTGATA
TGAAGAAGAACGAAGGGGAGCCAGACGTTACATCTCCCGCCCCTACGGAA
GCGGAAAATCGATGGGGACGCGCGATTGCGGCATCTTCACCACAAGAGGT
GATGAGGATCGTCAAGGACGCTAGGTCTCGGGCGATGTCGTCACCGGAGG
AGGGGGGATCCGGAAATTCCCAAGAGGTGCGGAAAGACAGACATTTCTTG
TCTAGAATCCGAGTGGAGCTTGTGAACAGGAGCACAAGCGAAGCCTCCTC
ATGTGAGATGGTTATCGTGGAGCTCGCGGAGGAGATGCCAGGGGAGGCTT
GGCCGGCGGCCGTGGCAGACACCGTGCGTGCTCACGCTGCTGCGACCGTT
GTGAATACCAACAAGGCGGACAGAGCGGACGGGCTCTCAGGGATGGTCAG
GAGTTGCCTCGCGGACACGGCCAAGGTGTGCCTGCGAGATGGTAAGCAGA
CACTGGCCCTCCTCACGGCGGCACAGCAGCATTGGACGTTTACGCACGTC
TTCCAAAATGCGTCGGCCGAGGTAGCGGCGACTACAGCGGCGCAGGCAGA
GCTGCACAAGGAAGTTGCGGGGCTGGGGACATCGCTCGCGGACGGTCACA
ACGTCCTTCTCATGGCCGTGGGCGCTTCCCGGTCGGGAAAGACGCTGGCG
CTTGTAGGAGAACCTGACCAGACAGCGGCAGCCGCAGGGGGTGACGGTTT
CTTCGTTGCGGACATTTCGGGCGAGGATGACAAAGGGACGTCGACGCCTG
CAGCAACGGCGAATCAAGGCGAATCCAAGAAAGTTCCGAAAAGGGGCAAG
GGGAAGGCCGGTGGCGGCGGTGGAGGGGGCGAGCGCGGGGGCGAGGAGGC
GTTAGGCGATGGTGGGGGGGGGGTTGCTGTCAAGGTGACACCCTTGGCCG
GAGTGTTGCCGCGACTGGTGGCAGAAACGTTCGCGACGCTGAAGCATCGC
GTCGCGCAGTGCGCTTTTGTTGTTTGGGTCAGCGTCGTCGCGGTTTCAAT
ACCTGTGGCGCCACAGGTAGCTACTGACAGTAGCGGTGTGGTAGAGAACC
TCCTACCTCCGGTGGATTCACCGCCTGTGTTCGGCGATTCCTCCTCGGTG
GTACGTGAAGGTAATACCTCTGATATGAAGAAGAACGAAGGGGAGCCAGA
CGTTACATCTCCCGCCCCTACGGAAGCGGAAAATCGATGGGGACGCGCGA
TTGCGGCATCTTCACCACAAGAGGTGATGAGGATCGTCAAGGACGCTAGG
TCTCGGGCGATGTCGTCACCGGAGGAGGGGGGATCCGGAAATTCCCAAGA
GGTGCGGAAAGACAGACATTTCTTGTCTAGAATCCGAGTGGAGCTTGTGA
ACAGGAGCACAAGCGAAGCCTCCTCATGTGAGATGGTTATCGTGGAGCTC
GCGGAGGAGATGCCAGGGGAGGCTTGGCCGGCGGCCGTGGCAGACACCGT
GCGTGCTCACGCTGCTGCGACCGTTGTGAATACCAACAAGGCGGACAGAG
CGGACGGGCTCTCAGGGATGGTCAGGAGTTGCCTCGCGGACACGGCCAAG
GTTGTGACAATCTTGTGCGTAAGCCCAGCTGATAACCACGCGGACAAGAC
TGAGAAAACCCTCAGCTTCGGGAAGGCCTGCGAAAACTCGGGCGAAGATG
GTGCTGCGCAGCTCAAGTTGTGACAATCTTGTGCGTAAGCCCAGCTGATA
ACCACGCGGACAAGACTGAGAAAACCCTCAGCTTCGGGAAGGCCTGCGAA
AACTCGGGCGAAGATGGTGCTGCGCAGCTCAAGGATCTCAAGAAAGAACT
GGCTAGACTCAAGAAGGAGGCGAAGGGCACCAAGAAAACGGCCACGTCTC
AGCTTCCGCGTCCTGCTGGAGGGAAACGGTCATAGGGATCTCAAGAAAGA
ACTGGCTAGACTCAAGAAGGAGGCGAAGGGCACCAAGAAAACGGCCACGT
CTCAGCTTCCGCGTCCTGCTGGAGGGAAACGGTCATAG
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