mRNA_E-siliculosus-1a_F_contig1024.212.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1024.212.1
Unique NamemRNA_E-siliculosus-1a_F_contig1024.212.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: D7FVF0_ECTSI (Dnm1, dynamin-related GTPase involved in mitochondrial division n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF0_ECTSI)

HSP 1 Score: 939 bits (2428), Expect = 0.000e+0
Identity = 521/528 (98.67%), Postives = 523/528 (99.05%), Query Frame = 2
Query:  431 MAMEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            MAMEDLIPVVNKLQDVFSAIGQ+PIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGG SNGSVLPGGAPRTPSRTGRSGPGAGGGLSPP  X XPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIE+QIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDP GTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ
Sbjct:    1 MAMEDLIPVVNKLQDVFSAIGQTPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGSSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPPSXKXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEEQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDP-GTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 527          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: A0A836CKP3_9STRA (Dynamin central region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP3_9STRA)

HSP 1 Score: 657 bits (1696), Expect = 2.760e-226
Identity = 351/527 (66.60%), Postives = 395/527 (74.95%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPT-PEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            M++LIP+VNKLQDVFSAIGQ PIDLPQIVVIGSQSSGKSSVLEN+VGRDFLPRGTGIVTRRPL+LQLYNT G  G                               ++ES                                P  +P  P              SP      P  P+REWGEFLHLP QKF+NF EIREEI+RETDRLTG NKGIS++SINLRI+SP VLNLT+VDLPGITKVA GDQP DIE+QIR MC++YI NPNAIILSVT AN+DL NSDALKMAREVD +GDRT+GVLTK+DLMDP GTDA D+L+N +IPLKRG+VGVINRGQKDID GVSIRQAL KEA + ++H AY+ L  +VGT  L+K LNQ+LM HIRDCLPEIKSKLN+MM SV QE+AELGEPTD  S  +L ATLLTLLSKFA+NF AAVDGRGSSPDGIEMNELYGGARISY+FHE+F+ SL  ++PF+GL D+DIRTAI NANGTRPSLFVPEMSFDLLVRKQIARLEQ
Sbjct:    1 MDELIPIVNKLQDVFSAIGQPPIDLPQIVVIGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLYNTGGAAG-----------------------------HVKRES-------------------------------TPAASPTEPG-------------SPTAKRAVPAVPQREWGEFLHLPNQKFYNFTEIREEIVRETDRLTGRNKGISSQSINLRIFSPHVLNLTLVDLPGITKVALGDQPQDIEEQIRDMCMRYIHNPNAIILSVTPANSDLVNSDALKMAREVDMEGDRTIGVLTKLDLMDP-GTDAADILNNHVIPLKRGYVGVINRGQKDIDGGVSIRQALAKEALFVKEHAAYRSLQHKVGTATLAKQLNQVLMRHIRDCLPEIKSKLNMMMLSVQQEMAELGEPTDAASVNNLGATLLTLLSKFATNFQAAVDGRGSSPDGIEMNELYGGARISYVFHEVFARSLEGVNPFDGLADEDIRTAICNANGTRPSLFVPEMSFDLLVRKQIARLEQ 453          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: A0A7S3Y4P9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4P9_HETAK)

HSP 1 Score: 581 bits (1497), Expect = 2.030e-197
Identity = 318/525 (60.57%), Postives = 372/525 (70.86%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLE 2011
            ME+LIPVVN+LQDVFSAIG+ PIDLPQIVVIG+QSSGKSSVLE++VGRDFLPRGTGIVTRRPL+LQLYNT      K                             R+     V                            P   P  P        G+ G               EWGEFLH+PG+KF +F EIR EIIRETDRLTG NKGIS KSINLR++SP VLNLT+VDLPGITKV+ GDQP DIEDQIR MCL YI+NP AIIL++T+AN DLANSDALK+A+EVD  GDRT+GVLTKIDLMDP GTDA +ML+NR+IPL+RG+VGVINRGQKDIDD V IR++L++E  +F+ HP YK L  R+ T NL++TLNQIL+HHIRDCLP+IK ++  MM  V  ELA LGEP + +SGA     LL LLSKFA+ F +AVDG+ +S  GIEMNELYGGARIS+IFHEIF  SL  IDPF+ L+D +IRTAI NANGTRPSLFVPE+SFDLLV++QIARLE
Sbjct:    1 MENLIPVVNRLQDVFSAIGEKPIDLPQIVVIGAQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLVLQLYNTNSKNMPK-----------------------------RESPAANV----------------------------PLATPSNPFGNEADPSGSDG--------------EEWGEFLHMPGRKFTDFNEIRNEIIRETDRLTGRNKGISNKSINLRVFSPRVLNLTLVDLPGITKVSVGDQPLDIEDQIREMCLAYIRNPRAIILAITAANGDLANSDALKLAKEVDRMGDRTIGVLTKIDLMDP-GTDAAEMLNNRVIPLRRGYVGVINRGQKDIDDRVDIRESLRREKRFFQAHPVYKNLLHRLTTPNLARTLNQILIHHIRDCLPDIKQRIGSMMVEVQNELAGLGEPINEMSGARQGTLLLQLLSKFATTFQSAVDGKSTSNKGIEMNELYGGARISFIFHEIFRRSLEAIDPFDALSDAEIRTAICNANGTRPSLFVPEISFDLLVKRQIARLE 453          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: A0A2D4BI22_PYTIN (Dynamin-2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI22_PYTIN)

HSP 1 Score: 563 bits (1452), Expect = 7.900e-190
Identity = 302/526 (57.41%), Postives = 361/526 (68.63%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            ME LIP++NKLQDVFSAIGQSP++LPQIVVIGSQSSGKSSVLEN+VGRDFLPRG+GIVTRRPLILQLYN +   GG                                  G    G  D                                                          E+GEFLHLPGQKF +F+EIR EI RET+RLTG NKGIS KSINL+++SP VLNLT+VDLPG+TKV  GDQP +IE+QIR MCL++I NPN+IIL+VTSANTDLANSDALKMARE+DP+G RT+GVLTK+DLMD  GTDA DML  R+IPLKRGFVGV+NR Q DI++GVSIR +L KE  +F+ H AY+GL  R+GT  LSKTLN ILMHHIRDCLP+IKSK+  M+  +  EL E+G PTD +S   L   LL L+S  A+NF  ++DGR  S +G+EMNELYGGARISYIF+EIF+ +L  ++PF+GL+D+DIRT I NANG R SLFVPE+SF+LL ++QI RLEQ
Sbjct:    1 MEQLIPIINKLQDVFSAIGQSPLNLPQIVVIGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLYNVSSPSGG---------------------------------GGXXXDGADDG-----------------------------------------------------AEVEEYGEFLHLPGQKFTDFSEIRREIERETERLTGKNKGISNKSINLKVFSPHVLNLTLVDLPGVTKVPVGDQPVNIEEQIRDMCLEFITNPNSIILAVTSANTDLANSDALKMAREIDPEGLRTIGVLTKLDLMDD-GTDALDMLQGRVIPLKRGFVGVVNRSQADINNGVSIRDSLAKEMTFFKSHAAYRGLASRLGTQYLSKTLNTILMHHIRDCLPDIKSKIAAMIADLDLELGEMGSPTDAMSKTDLGGCLLNLISHVAANFTNSLDGRNHSLNGVEMNELYGGARISYIFNEIFTKALQEVNPFDGLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQIKRLEQ 439          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: A0A7S2V112_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V112_9STRA)

HSP 1 Score: 563 bits (1452), Expect = 2.250e-189
Identity = 311/527 (59.01%), Postives = 372/527 (70.59%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGA-GGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            ME LIPVVN+LQDVFSA+G+  IDLPQIVVIGSQSSGKSSVLEN VGRDFLPRGTGIVTRRPLILQLYNT+   GG                                           SGS G            S+          TPS  G   PGA  G L  P          E+G FLH P QKF++F EIREEII ET+RL G NKGIS+KSINL+IYSP VL LT++DLPGITKV+ GDQP DIEDQIR +CLQ+I NP  I+L+VT AN+DLANSDALK+AREVDP+GDRT+GVLTK+DLMDP GTDA DML NR+IPL+RG+V V+NRGQ+DI+  V+++++L +E  +F+ HPAYK L  R  T  L+K+LN +LMHHIRD LPEIK K++ M   V+QE+  LG+P D ++G    + LLTLLSKFASNF +AVDG+ SS  GIEM EL+GGARIS+IFHEI   SL  +DPF+GLTD +IRT I NA+GTRPSLF+PE+SFDLLV++QI+RLEQ
Sbjct:    1 MEQLIPVVNRLQDVFSAVGEQSIDLPQIVVIGSQSSGKSSVLENFVGRDFLPRGTGIVTRRPLILQLYNTS--KGGSS---------------------------------------SSSGSSGRTXXXXXXXXXXSS---------LTPSGGGH--PGALNGDLPQPPPVPSTGSMEEYGVFLHKPRQKFYDFHEIREEIISETERLVGRNKGISSKSINLKIYSPNVLTLTLIDLPGITKVSVGDQPLDIEDQIRELCLQFIANPKCIVLAVTPANSDLANSDALKLAREVDPEGDRTIGVLTKLDLMDP-GTDATDMLQNRVIPLRRGYVAVVNRGQRDIEGNVNVKESLVRERRFFQQHPAYKHLLHRCTTPTLAKSLNSMLMHHIRDTLPEIKQKISQMSVKVTQEMCTLGDPMDSMNGGQRGSLLLTLLSKFASNFQSAVDGKNSSSRGIEMTELHGGARISFIFHEILRKSLEQVDPFDGLTDSEIRTTIANAHGTRPSLFLPEISFDLLVKRQISRLEQ 474          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: K3XBJ4_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XBJ4_GLOUD)

HSP 1 Score: 560 bits (1444), Expect = 6.660e-189
Identity = 296/526 (56.27%), Postives = 365/526 (69.39%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            M+ LIP++NKLQDVFSAIGQSPI+LPQIVVIGSQSSGKSSVLEN+VG+DFLPRGTGIVTRRPL+LQLYN                                                                 G S   +  G AP   + TG +                     EWGEFLHLPGQKF +F EIR EI +ET+R+TG NKGIS KSINL+++SP+VLNLT+VDLPG+TKV  GDQP DIE+QIR MC+++I NPN+IIL+VT AN+DLANSDALK+ARE+DP+G RT+GVLTK+DLMD  GTDA DML  R+IPLKRGFVGVINR Q DI++ ++IR +L KE  YF++HPAY+G+  R+GT  LSKTLN ILMHHIRDCLPEIKSK+  M+  +  EL E+G PT+ +S   +   LL L+S F++NF  ++DGR  + +G+EMNELYGGARISYIF++IFS SL  ++PF+ L+D+DIRT I NANG R SLFVPE+SF+LL ++QI RLEQ
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGTGIVTRRPLVLQLYNI----------------------------------------------------------------GPSGAPLADGAAPMAANGTGET-------------------AEEWGEFLHLPGQKFTDFNEIRREIEKETERITGKNKGISNKSINLKVFSPYVLNLTLVDLPGVTKVPVGDQPVDIEEQIRDMCVEFISNPNSIILAVTPANSDLANSDALKLAREIDPEGQRTIGVLTKLDLMDE-GTDAMDMLQGRVIPLKRGFVGVINRSQADINNKLAIRDSLTKEQQYFKNHPAYRGMSSRMGTQYLSKTLNTILMHHIRDCLPEIKSKIGSMVNDLDVELGEMGSPTEAMSKTEMGGCLLNLISHFSANFTNSLDGRNHALNGVEMNELYGGARISYIFNDIFSKSLQEVNPFDNLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQIKRLEQ 442          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: A0A8K1C5A9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5A9_PYTOL)

HSP 1 Score: 559 bits (1440), Expect = 2.420e-188
Identity = 297/526 (56.46%), Postives = 364/526 (69.20%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            M+ LIP++NKLQDVFSAIGQSPI+LPQIVVIGSQSSGKSSVLEN+VGRDFLPRG+GIVTRRPL+LQLYN + T                                  KES                                                                   EWGEFLHLPGQK  +F+E+R+EI RET+R+TG NKGIS KSINL+I+SP VLNLT+VDLPG+TKV  GDQP +IE+QIR MC+++I NPN+IIL+VTSANTDLANSDALKMARE+DP+G RT+GVLTK+DLMD  GTDA DML  RIIPLKRGFVGV+NR Q DI++ VSIR AL KE +YF++HP+Y+ +  R+GT  LSKTLN ILMHHIRDCLP+IKSK++ M+  +  EL E+G PT+ +S   +   LL L+S F++NF  ++DGR  S +G+EMNELYGGARISYIF+EIF+ +L  ++PF+GL+D+DIRT I NANG R SLFVPE+SF+LL ++QIARLEQ
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLVLQLYNISNT-------------------------------DLAKESDV----------------------------------------------------------------EEWGEFLHLPGQKISDFSELRKEIERETERMTGKNKGISNKSINLKIFSPHVLNLTLVDLPGVTKVPVGDQPVNIEEQIRDMCMEFIANPNSIILAVTSANTDLANSDALKMAREIDPEGVRTIGVLTKLDLMDD-GTDALDMLQGRIIPLKRGFVGVVNRSQADINNSVSIRDALSKETSYFKNHPSYRAMASRMGTQYLSKTLNTILMHHIRDCLPDIKSKISSMVNDLDLELGEMGNPTEKMSKTEMGGCLLNLISHFSANFTNSLDGRNHSLNGVEMNELYGGARISYIFNEIFTKALQDVNPFDGLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQIARLEQ 430          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: W7T8I3_9STRA (Dynamin like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8I3_9STRA)

HSP 1 Score: 553 bits (1426), Expect = 1.070e-186
Identity = 304/534 (56.93%), Postives = 364/534 (68.16%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGS--------SPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            M+ LIP+VNKLQDVF+AIG+ P+DLPQIVVIGSQSSGKSSVLE++VGRDFLPRGTGIVTRRPLILQLYNTA   GG                                  G    GR         G                                                 +EWGEFLH  G++F++F EIR+EI RETDRLTG NKGISAKSINL++YSP VLNLT+VDLPGITKV+ GDQPADIE QIR MCL YI NPN+IIL+VT+ANTD+ANSD+LK+AREVDP G RT+GVLTK+DLMDP GTDA D+L NR+IPL+ G+V V+NRGQ+DID  ++IR+AL+KEA +F+ HP Y+ + K+  T  L++ LN ILMHHIRDCLPEIKS++  M   V +EL  LGEPT  +S A+L  T+L LLS+FAS F +AV+GRGS           G E  ELYGGARI+YIF EIF  +L  IDPF  LTD++IRTAI NANGTRP+LFVPE+SFDLLV++QI+RLEQ
Sbjct:  114 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGG----------------------------------GEDEGGRXXXXXXXXXG-------------------------------------------------KEWGEFLHRAGERFYDFMEIRDEIKRETDRLTGKNKGISAKSINLKVYSPHVLNLTLVDLPGITKVSVGDQPADIESQIRAMCLAYIGNPNSIILAVTAANTDIANSDSLKLAREVDPDGLRTIGVLTKMDLMDP-GTDAADVLLNRVIPLRIGYVAVVNRGQRDIDSNLTIREALRKEAGFFKAHPVYRSMLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMDVGRELEALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGRGSFAAGREGGGVGGAETLELYGGARINYIFSEIFGKALMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQ 563          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: A0A024FVY3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVY3_9STRA)

HSP 1 Score: 551 bits (1421), Expect = 1.400e-185
Identity = 298/526 (56.65%), Postives = 356/526 (67.68%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            M+ LIP+VNKLQDVFSAIGQSP++LPQIVVIGSQSSGKSSVLEN+VGRDFLPRG+GIVTRRPLILQLYN+   +                                                  L+GG                                                 EWGEFLH+PG+KF +F+EIR EI RETDRLTG NKGIS K+INL+IYSP VLNLT+VDLPG+TKV  GDQP DIE+QIR MC+++I NPN+IIL+VTSANTDLANSDALK+ARE+DP GDRT+GVLTKIDLMD  GTDA +ML  RII L+RGFVGV+NR Q DI++ VSIR +LQKE  +F+ H AY+ +   +GT  LSKTLN ILMHHIRDCLPEIKSK+  M+  + QEL E+G PT  +S   L   LL L+S FA+NF  ++DGR +SP+G+EM ELYGGARI YIF EIF  +L  +DPF+ L+D+DIRT I NANG R SLFVPE+SF+LL ++QI RLEQ
Sbjct:    1 MDQLIPIVNKLQDVFSAIGQSPVNLPQIVVIGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLYNSQSNLDETQ----------------------------------------------LIGGESNV---------------------------------------------EWGEFLHIPGKKFKDFSEIRHEIERETDRLTGKNKGISNKTINLKIYSPHVLNLTLVDLPGVTKVPVGDQPIDIEEQIRDMCVEFISNPNSIILAVTSANTDLANSDALKLAREIDPAGDRTIGVLTKIDLMDE-GTDALEMLQGRIISLRRGFVGVVNRSQADINNNVSIRDSLQKEQKFFQQHSAYRTVSSTMGTQYLSKTLNTILMHHIRDCLPEIKSKIGSMVTDLDQELTEMGSPTQSMSKTDLGGCLLHLISHFATNFSNSLDGRHNSPNGMEMQELYGGARIHYIFGEIFMKALRDVDPFDTLSDEDIRTTIRNANGPRQSLFVPEISFELLAKRQIKRLEQ 434          
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Match: F0W9Q8_9STRA (Dynamin GTPase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9Q8_9STRA)

HSP 1 Score: 550 bits (1417), Expect = 5.110e-185
Identity = 294/526 (55.89%), Postives = 360/526 (68.44%), Query Frame = 2
Query:  437 MEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAGTMGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPRTPSRTGRSGPGAGGGLSPPXXXXXPTPEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQ 2014
            M+ LIP+VNKLQDVFSAIGQSP++LPQIVVIGSQSSGKSSVLEN+VGRDFLPRG+GIVTRRPLILQLYN+                                      +    + G  D                                                          EWGEFLH+PG+KF +F+EIR EI RETDRLTG NKGIS K+INL+I+SP+VLNLT+VDLPG+TKV  GDQP +IE+QIR MC+++I NPN+IIL+VTSANTDLANSDALK+ARE+DP GDRT+GVLTKIDLMD  GTDA +ML  R+I L+RGFVGV+NR Q DI++ VSIR +LQKE  +F++H AY+ +  ++GT  LSKTLN ILMHHIRDCLPEIKSK+  M+  + QELAE+G PT  +S   L   LL L+S F++NF  ++DGR +SP+GIE++ELYGGARI YIF EIF  +L  +DPF+ L+D+DIRT I NANG R SLFVPE+SF+LL ++QI RLEQ
Sbjct:    1 MDQLIPIVNKLQDVFSAIGQSPVNLPQIVVIGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLYNSQSNS--------------------------------TLDESQPLRGENDV---------------------------------------------------------EWGEFLHIPGKKFTDFSEIRREIERETDRLTGKNKGISNKTINLKIFSPYVLNLTLVDLPGVTKVPVGDQPVNIEEQIRDMCVEFISNPNSIILAVTSANTDLANSDALKLAREIDPAGDRTIGVLTKIDLMDE-GTDALEMLQGRVISLRRGFVGVVNRSQADINNNVSIRDSLQKEHLFFQNHTAYRTVSSKMGTQYLSKTLNTILMHHIRDCLPEIKSKIGSMVADLDQELAEMGSPTQSMSKTDLGGCLLHLISHFSTNFSNSLDGRHNSPNGIELHELYGGARIHYIFGEIFIKALREVDPFDTLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQIKRLEQ 436          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1024.212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVF0_ECTSI0.000e+098.67Dnm1, dynamin-related GTPase involved in mitochond... [more]
A0A836CKP3_9STRA2.760e-22666.60Dynamin central region-domain-containing protein n... [more]
A0A7S3Y4P9_HETAK2.030e-19760.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2D4BI22_PYTIN7.900e-19057.41Dynamin-2 n=1 Tax=Pythium insidiosum TaxID=114742 ... [more]
A0A7S2V112_9STRA2.250e-18959.01Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XBJ4_GLOUD6.660e-18956.27Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A8K1C5A9_PYTOL2.420e-18856.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7T8I3_9STRA1.070e-18656.93Dynamin like protein n=1 Tax=Nannochloropsis gadit... [more]
A0A024FVY3_9STRA1.400e-18556.65Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0W9Q8_9STRA5.110e-18555.89Dynamin GTPase putative n=1 Tax=Albugo laibachii N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1024contigE-siliculosus-1a_F_contig1024:418..5597 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1605
Model size2035
Exons9
Ec32 orthologEc-14_000860.2
Ec32 ortholog descriptionDnm1, dynamin-related GTPase involved in mitochondrial division
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko03029,ko04131,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.I
EC3.6.5.5
EggNOG OGsCOG0699@1,KOG0446@2759
EggNOG free text desc.mitochondrial fission
GOsGO:0000166,GO:0000266,GO:0000920,GO:0001882,GO:0001883,GO:0001891,GO:0003373,GO:0003374,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005522,GO:0005525,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005886,GO:0006508,GO:0006807,GO:0006810,GO:0006873,GO:0006885,GO:0006897,GO:0006907,GO:0006909,GO:0006996,GO:0006997,GO:0007005,GO:0007010,GO:0007015,GO:0007032,GO:0007163,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008289,GO:0009653,GO:0009987,GO:0010256,GO:0010467,GO:0015631,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016462,GO:0016485,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0030004,GO:0030029,GO:0030036,GO:0030139,GO:0030587,GO:0030641,GO:0031090,GO:0031288,GO:0031410,GO:0031966,GO:0031967,GO:0031975,GO:0031982,GO:0032153,GO:0032154,GO:0032155,GO:0032502,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042592,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044656,GO:0045335,GO:0045851,GO:0048285,GO:0048311,GO:0048312,GO:0048856,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051258,GO:0051301,GO:0051452,GO:0051453,GO:0051604,GO:0051640,GO:0051641,GO:0051646,GO:0051703,GO:0051704,GO:0055067,GO:0055080,GO:0055082,GO:0061024,GO:0061025,GO:0065003,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0071944,GO:0090066,GO:0090148,GO:0090382,GO:0090383,GO:0090702,GO:0097159,GO:0097204,GO:0097367,GO:0097435,GO:0097708,GO:0098590,GO:0098657,GO:0098771,GO:0099120,GO:1900756,GO:1901265,GO:1901363,GO:1901564
KEGG Pathwayko04072,ko04139,ko04144,ko04214,ko04217,ko04621,ko04668,ko04721,ko04961,ko05100,map04072,map04139,map04144,map04214,map04217,map04621,map04668,map04721,map04961,map05100
KEGG koko:K01528,ko:K17065
Preferred nameDYN1
Seed eggNOG ortholog2880.D7FVF0
Seed ortholog evalue1.3e-272
Seed ortholog score945.3
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1024.212.1prot_E-siliculosus-1a_F_contig1024.212.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1024 418..4851 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.0995605-CDS-E-siliculosus-1a_F_contig1024:417..6161622927527.0995605-CDS-E-siliculosus-1a_F_contig1024:417..616Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 418..616 -
1696318568.417625-CDS-E-siliculosus-1a_F_contig1024:417..6161696318568.417625-CDS-E-siliculosus-1a_F_contig1024:417..616Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 418..616 -
1622927527.1092947-CDS-E-siliculosus-1a_F_contig1024:1184..12941622927527.1092947-CDS-E-siliculosus-1a_F_contig1024:1184..1294Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 1185..1294 -
1696318568.4334917-CDS-E-siliculosus-1a_F_contig1024:1184..12941696318568.4334917-CDS-E-siliculosus-1a_F_contig1024:1184..1294Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 1185..1294 -
1622927527.1182103-CDS-E-siliculosus-1a_F_contig1024:1690..18311622927527.1182103-CDS-E-siliculosus-1a_F_contig1024:1690..1831Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 1691..1831 -
1696318568.4438035-CDS-E-siliculosus-1a_F_contig1024:1690..18311696318568.4438035-CDS-E-siliculosus-1a_F_contig1024:1690..1831Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 1691..1831 -
1622927527.1277502-CDS-E-siliculosus-1a_F_contig1024:2166..22651622927527.1277502-CDS-E-siliculosus-1a_F_contig1024:2166..2265Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 2167..2265 -
1696318568.4516232-CDS-E-siliculosus-1a_F_contig1024:2166..22651696318568.4516232-CDS-E-siliculosus-1a_F_contig1024:2166..2265Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 2167..2265 -
1622927527.137293-CDS-E-siliculosus-1a_F_contig1024:2848..29641622927527.137293-CDS-E-siliculosus-1a_F_contig1024:2848..2964Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 2849..2964 -
1696318568.4600065-CDS-E-siliculosus-1a_F_contig1024:2848..29641696318568.4600065-CDS-E-siliculosus-1a_F_contig1024:2848..2964Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 2849..2964 -
1622927527.150098-CDS-E-siliculosus-1a_F_contig1024:3243..34541622927527.150098-CDS-E-siliculosus-1a_F_contig1024:3243..3454Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 3244..3454 -
1696318568.4712322-CDS-E-siliculosus-1a_F_contig1024:3243..34541696318568.4712322-CDS-E-siliculosus-1a_F_contig1024:3243..3454Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 3244..3454 -
1622927527.1599839-CDS-E-siliculosus-1a_F_contig1024:3736..39201622927527.1599839-CDS-E-siliculosus-1a_F_contig1024:3736..3920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 3737..3920 -
1696318568.4910684-CDS-E-siliculosus-1a_F_contig1024:3736..39201696318568.4910684-CDS-E-siliculosus-1a_F_contig1024:3736..3920Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 3737..3920 -
1622927527.1750965-CDS-E-siliculosus-1a_F_contig1024:4306..48511622927527.1750965-CDS-E-siliculosus-1a_F_contig1024:4306..4851Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 4307..4851 -
1696318568.5014892-CDS-E-siliculosus-1a_F_contig1024:4306..48511696318568.5014892-CDS-E-siliculosus-1a_F_contig1024:4306..4851Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1024 4307..4851 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.1997712-UTR-E-siliculosus-1a_F_contig1024:4851..49631622927527.1997712-UTR-E-siliculosus-1a_F_contig1024:4851..4963Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1024 4852..4963 -
1696318568.5111413-UTR-E-siliculosus-1a_F_contig1024:4851..49631696318568.5111413-UTR-E-siliculosus-1a_F_contig1024:4851..4963Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1024 4852..4963 -
1622927527.2159836-UTR-E-siliculosus-1a_F_contig1024:5279..55971622927527.2159836-UTR-E-siliculosus-1a_F_contig1024:5279..5597Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1024 5280..5597 -
1696318568.5323133-UTR-E-siliculosus-1a_F_contig1024:5279..55971696318568.5323133-UTR-E-siliculosus-1a_F_contig1024:5279..5597Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1024 5280..5597 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1024.212.1

>prot_E-siliculosus-1a_F_contig1024.212.1 ID=prot_E-siliculosus-1a_F_contig1024.212.1|Name=mRNA_E-siliculosus-1a_F_contig1024.212.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=535bp
MAMEDLIPVVNKLQDVFSAIGQSPIDLPQIVVIGSQSSGKSSVLENVVGR
DFLPRGTGIVTRRPLILQLYNTAGTMGGKRGSSGVAAATAAGAAGPAGTS
PTAPPPPPRKESGYTVTGRQDSGSGGLVGGRVAAFGGGSNGSVLPGGAPR
TPSRTGRSGPGAGGGLSPPPSPKPPTPEREWGEFLHLPGQKFFNFAEIRE
EIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQP
ADIEDQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDR
TVGVLTKIDLMDPAGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSI
RQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKS
KLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGR
GSSPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYN
ANGTRPSLFVPEMSFDLLVRKQIARLEQVIRSVC*
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mRNA from alignment at E-siliculosus-1a_F_contig1024:418..5597-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1024.212.1 ID=mRNA_E-siliculosus-1a_F_contig1024.212.1|Name=mRNA_E-siliculosus-1a_F_contig1024.212.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5180bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1024:418..5597- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGACCACGCCCCAAACCCGAGCAGCAGCAGCAGCAGCAGCAGCAGTTACT GCTGTGCTCACCATCCCCACGGAATAGCAAGCCATCGACCACGTCGAACA CTGACTGACCCTGCTCTATAGGGTAGGGGGCTTTTGGCTGCAGCAGCAAG ACGGAGGCAAAGCACACACAGAACGGTCCTGGGGAAGTTTTGAGAACTCA CAGCAGGTAGGCGACAGAGCGCTGCTGTTGCTGCTGCTGCCGCTGCTGGA AGCGAAGGCGAGAGTTGATGCGACTAGCTGCACTTGGTGAAGCCTACATC GCTGCCGAAGTGGTTGAGGTGGGTGGGGACCACTGCAGTGTTGCTTTCTC CGCGCGGTCGCCGGGCGTCTCCGGGTGTACTGTGTCTACGATACGGAAGG CAGTGTTCTTACTTCAGACCAGAGAGGATAGCAGCAACCCAAGTTGTCGC TGTGTGTTCAACTGGACTGCTGGAGATTGGATATGATGGTATCAGGAGTC GTAATTCTAGAGGAGATTCTTAGAGCTAAAGCGTTGCAGAGGGAGATCGT GCTCTACCCCCAAGCTGTAGCATATTGATCAACCGACCTTTCCCAACTAC GCGTCACGTTTCCAACATCCCATCTCCAAAGCAGCTGCCGAGGTGAGGGT TGACAACCACAGAAGGCTGTCCGATCACAAACAATTGTCGAGAGCCGTAA CGCGACCACGGGAGACGTCGCACACGCTCATCCCCTTCCCATAAAAATGG CGATGGAAGACTTGATTCCGGTCGTCAACAAGCTGCAGGATGTCTTCAGC GCGATCGGGCAGAGCCCCATCGACCTCCCACAGATCGTCGTCATCGGCTC TCAGAGCTCGGGCAAGAGCAGCGTCCTCGAAAACGTCGTGGGGCGCGACT TCCTGCCGCGAGGCACGGGCATCGTGACCCGCCGCCCCCTCATCCTGCAG CTCTACAACACCGCCGGCACCATGGGCGGCAAGCGCGGGAGCTCGGGGGT CGCTGCTGCTACTGCTGCTGGTGCTGCCGGCCCCGCCGGTACCTCCCCCA CCGCCCCCCCCCCCCCCCCCCGCAAAGAATCCGGCTACACGGTGACCGGT AGGCAGGACTCGGGTTCTGGAGGGCTTGTCGGGGGCCGCGTTGCTGCTTT CGGGGGGGGTTCGAACGGCTCGGTGTTGCCTGGGGGTGCGCCGAGGACGC CGAGCAGGACAGGCCGGAGCGGGCCCGGGGCGGGGGGGGGTCTTAGCCCG CCGCCTAGCCCGAAGCCGCCGACGCCGGAGAGAGAATGGGGGTGAGTTTT GAGCCGTCCTGGGGAGGGAGGTGGGCTGGAGAGGAAAGCATGGAACACTG CTGGTGTTGGTGCTGTGCGTTTTGTCCGGGGTCCTTTTGTGTGCGAGAAT CTGGCTCGGAGGTGTTTGGGTGTAGGTATTGTAGTTCATTTTACCTGCAT GTTGCACTGGATGCGGGAGAACCAATGTAGGTCGGTAGGTAGGTCTATCA TTTCTGGCTCCCGGGCAATTCGATGGAGAAGCAGCGAGGCGCTAGGACCA AAATAGCACAGCATAATCAGCACACCTTACCGCATGTGTTTGCATTTGTG AGCCGTACGAACACCATCAATAACCACGCGTTTTCTTCCCTCCCCTCTCT CGCCTTCGACGTCGCAAATGACGACAGGGAATTCCTCCATCTCCCTGGCC AGAAGTTCTTTAACTTCGCCGAGATCAGGGAGGAGATCATCCGCGAAACG GACAGGCTGACGGGCAACAACAAGGGGATATCCGCCAAGAGCATCAACCT CCGGATCTACTCGCCCTTTGTGCTTAACCTCACCATGGTTGACCTGCCGG GCATCACCAAGGTGCGCCGGCCAGCAGTAGCAGCAGCAGCAGGAGCATCC ACTGCTATGTACTTCAAAGTAATTTTTTTTCTTTTGGTTCCACGCTCGTA CTGTACCATCGCTTTGCTCTCCTCGCCTCCTTGCACAAGCCCCGCATATC GTGAATGACGTAAACGCCCAGGTGTTGGCGACAACCGGGCGTGTATGAGC GTGTGTTTCGCGCGATTGCAGACGTAGCCGTCGTCTGCCCCCTCTGTGTC TTTTTAGCTTCCAACGAGCGTTCCTTCTTCCCCCCCGCCGTAGGTAGCCA CCGGAGACCAGCCGGCCGACATCGAAGACCAGATCCGAGGCATGTGCTTG CAGTACATCAAGAACCCGAACGCCATCATCCTCTCCGTAACGTCGGCGAA CACCGACCTGGCCAACAGCGACGCCCTCAAGATGGCGAGGGAGGTGGACC CCAAAGGGGACAGGACCGTCGGCGTCCTCACCAAGATCGACCTCATGGAC CCCGGTACGAGGAAGTACTAGAGACGACCCCCCCCCCCCAGGCAGGCGCC TGTTTTCTGTTAGGAAACTGTCGTTTTCTCGCTCGTGAATGCTGTTCGTC GTGTGTGAGTTGACATCGTGGGTTTCTTTTCTTTTGTTCGGATGTCCTCG CTCTCGCAATATGGCCCGTCCCCTAGTGCCAAGGTGAGCATTTTGTCATG TAGGGTGACTGCTAGCCGGTACCACCGCCAGGCGGTTCTAGTGCGTGTGC TCAACGAGTGCGCTGCCCGTGTTGCTGTGCGAGCAGGCACCGATGCTGGG GACATGCTGGACAACCGAATTATCCCCCTCAAGCGAGGGTTCGTGGGTGT AATCAACCGCGGACAGAAGGACATCGATGATGGGGTCAGCATTCGGCAGG TGGGCGCTTGGTGCGCTGCGTCGTACAGACGCTATCCCCGAGTTCGTCGT TCGTAGGACCGTTTTTTTATCCTGCCCCCAGCCAAAGTTGAACAACATGC AACGGAATTGAAGCAAGTAAGCACGCACGTATCATACAGTTCGCTGTTGC TGTGTTCAGCTGAAGCCGAATCCAATTTGCGAAGATATCTTCAGCACCTT AGCTTCACCGCCAAAAGAACGGCCCCTGTGGCGAACGGACGGAACGAAAT AGTCGCCTGTGCCAGTCTTGACGTCACCGCACTCATTGCATTGCCGGTGC GGTCGGGGCGGTGTTTGGCAGCAGGCCCTTTTTTGGTTTGCCTATGCCTG TCCACGTTTCAAAAGTTGTGGTACTGGCTGGTGTCCCAGGGCCCGGGTGA CTGTAGTATTGTCGAATGTCAGGAATGTTGTCTACGGGTTGCAGGCGCTG TCTTTAGAAAGTGCATGCGGCCTGCGGCGACGCCGCACGCCTTGTATTGC CTGACTCCTCACCGAGCTTGGCAAGTTTGGACTCAGCCGGTGTTGTTGTA ATTTCTTGCGCGGGCGGCGGTCTGGACAACAGGCCCTTCAGAAGGAGGCG GCGTATTTCAGAGACCACCCCGCCTACAAAGGCCTCGACAAGCGCGTTGG AACGACCAACCTTTCCAAGACCCTCAACCAGGTGATTTGACCAGAGTAGT TTGTTTCTAGCATGCATATCATGGCAGCTTTCGTGCTTGAGTGCGAACAA TTCGACGGGAAGATGTTTTGGGCTAACCACGCGTATTGGCTGTAGTCTTG TCTGTTGCTCCCTCGGCGTATTCCTGTCCTACAACGGTATCATATATATA TATTTTGTACACCTTGTTGTTATTGTCGCTGTTGAGGTGGGTAATGTACG TTCTCCTGTTGCACAAAATGCGGGAATTGGAGTGGAGTAGTCCTGTCCTA CGGTATGCGTTGGAACTGTAGTACGTAACGATTCCCCCGCGCCGTATCGA AAACGTGAACGTGCAGATCTTGATGCACCACATCCGGGACTGTTTGCCAG AAATCAAGAGCAAGCTGAACGTGATGATGCAGAGCGTGTCTCAAGAGCTG GCTGAGCTCGGCGAGCCGACGGACTGCGTGTCCGGCGCCTCCCTCACGGC TACCTTGGTGAGAAACGAGGAACGGATAGCTGCTGTCGCTTGGTGCCATA GTCTTAAGGCACGCGAGAGGTAATTAATCAGAAGACGTGCGATGTTATTA TAGTGGACCTAACGTGATCGTGGGTATTTTTAGGTTCCAGCGACCTGCCT AATGCCTTGGTCGAACGATTTTTTCGTTGCTGGGTGTTGACCACGCTTGG CTAGAAGCTGCCGGTTGATCCCGCCCGTAGCCTCGTCCGTAGTACCTGTG CTCCCCGTTTTTGGCGACACACGTGCCGGCATCCAGAGTGCACAGCCGCG ACTGATCTTCCCCCTCGCCCCTCGGCACCGCCCGTTGTCCGTAACCGTTA CGGCGCGTTATTTTCTCCCTTCAAAATGTTTCTCTTTGGTTGCGTCGTGG CAGCTTACTCTCTTGTCCAAGTTCGCGTCCAACTTCCACGCGGCGGTCGA TGGCCGAGGCTCGTCGCCGGACGGAATTGAGATGAACGAGCTGTACGGCG GGGCTAGGATAAGGTGCGTGACGGGAGCGAGCTACGGTACGCCGCCGTGA ATGATACAAGGGGAGCAAGAAAAGCGACGGTTGCCTCGTTGTTGGTGGCA TCGTGCGGGTGGTGGTGGTGGTGGTGATAGCGGGGGTTTGACAGGGGCCG TCGGTGCCCGTTGGGCGGCTGGAAAATTGCTGGAACTCCCTCCAAGAAGA GCGTGGGGTTTTCCCCGGCCTCGTCTGGTGGTGATGGGGGGTTTTGCTCT CCGTTCCTCATTCTTTGTTAGATTGGTGGAAGTTATCGTGGGGGAAAATA TCACTGGTAACTGGGAGCAGACTACTCGTCCGTTGCCTACCGGACACGGG AGAGGAACATCTATCTCGGGTGGTTGCTCTTGTTGTTTGCCAGCCCAGCC GTTGCTGTCGCTTGTTTCTTAGCACACGCTATACTCCGCGTCCTGCTTCA CTTTTTCGGGGGCTTTCCTTTTTTCTTTTAAGTCTCCACAGCCTGTGGGT GCTGCCACAAATGCTGCCGTTTTTTTTTTATCGATTCGTTGTTCCCCTGC GTGCTACCGCTGCCGTTCGTGCCCACGGCAGCTACATTTTCCACGAGATT TTCTCTCACAGCTTGGCCACCATCGACCCATTCGAGGGGCTCACGGACCA GGACATCCGAACGGCAATCTACAACGCCAATGGCACCAGGCCTAGCCTCT TTGTGCCGGAGATGTCGTTCGATCTGCTCGTTCGCAAGCAGATTGCCCGA CTGGAACAGGTGATTCGATCCGTGTGTTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1024:418..5597-

>mRNA_E-siliculosus-1a_F_contig1024.212.1 ID=mRNA_E-siliculosus-1a_F_contig1024.212.1|Name=mRNA_E-siliculosus-1a_F_contig1024.212.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3210bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1024:418..5597- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGATGGAAGACTTGATTCCGGTCGTCAACAAGCTGCAGGATGTCTT
CAGCGCGATCGGGCAGAGCCCCATCGACCTCCCACAGATCGTCGTCATCG
GCTCTCAGAGCTCGGGCAAGAGCAGCGTCCTCGAAAACGTCGTGGGGCGC
GACTTCCTGCCGCGAGGCACGGGCATCGTGACCCGCCGCCCCCTCATCCT
GCAGCTCTACAACACCGCCGGCACCATGGGCGGCAAGCGCGGGAGCTCGG
GGGTCGCTGCTGCTACTGCTGCTGGTGCTGCCGGCCCCGCCGGTACCTCC
CCCACCGCCCCCCCCCCCCCCCCCCGCAAAGAATCCGGCTACACGGTGAC
CGGTAGGCAGGACTCGGGTTCTGGAGGGCTTGTCGGGGGCCGCGTTGCTG
CTTTCGGGGGGGGTTCGAACGGCTCGGTGTTGCCTGGGGGTGCGCCGAGG
ACGCCGAGCAGGACAGGCCGGAGCGGGCCCGGGGCGGGGGGGGGTCTTAG
CCCGCCGCCTAGCCCGAAGCCGCCGACGCCGGAGAGAGAATGGGGATGGC
GATGGAAGACTTGATTCCGGTCGTCAACAAGCTGCAGGATGTCTTCAGCG
CGATCGGGCAGAGCCCCATCGACCTCCCACAGATCGTCGTCATCGGCTCT
CAGAGCTCGGGCAAGAGCAGCGTCCTCGAAAACGTCGTGGGGCGCGACTT
CCTGCCGCGAGGCACGGGCATCGTGACCCGCCGCCCCCTCATCCTGCAGC
TCTACAACACCGCCGGCACCATGGGCGGCAAGCGCGGGAGCTCGGGGGTC
GCTGCTGCTACTGCTGCTGGTGCTGCCGGCCCCGCCGGTACCTCCCCCAC
CGCCCCCCCCCCCCCCCCCCGCAAAGAATCCGGCTACACGGTGACCGGTA
GGCAGGACTCGGGTTCTGGAGGGCTTGTCGGGGGCCGCGTTGCTGCTTTC
GGGGGGGGTTCGAACGGCTCGGTGTTGCCTGGGGGTGCGCCGAGGACGCC
GAGCAGGACAGGCCGGAGCGGGCCCGGGGCGGGGGGGGGTCTTAGCCCGC
CGCCTAGCCCGAAGCCGCCGACGCCGGAGAGAGAATGGGGGGAATTCCTC
CATCTCCCTGGCCAGAAGTTCTTTAACTTCGCCGAGATCAGGGAGGAGAT
CATCCGCGAAACGGACAGGCTGACGGGCAACAACAAGGGGATATCCGCCA
AGAGCATCAACCTCCGGATCTACTCGCCCTTTGTGCTTAACCTCACCATG
GTTGACCTGCCGGGCATCACCAAGGGAATTCCTCCATCTCCCTGGCCAGA
AGTTCTTTAACTTCGCCGAGATCAGGGAGGAGATCATCCGCGAAACGGAC
AGGCTGACGGGCAACAACAAGGGGATATCCGCCAAGAGCATCAACCTCCG
GATCTACTCGCCCTTTGTGCTTAACCTCACCATGGTTGACCTGCCGGGCA
TCACCAAGGTAGCCACCGGAGACCAGCCGGCCGACATCGAAGACCAGATC
CGAGGCATGTGCTTGCAGTACATCAAGAACCCGAACGCCATCATCCTCTC
CGTAACGTCGGCGAACACCGACCTGGCCAACAGCGACGCCCTCAAGATGG
CGAGGGAGGTGGACCCCAAAGGGGACAGGACCGTCGGCGTCCTCACCAAG
ATCGACCTCATGGACCCCGGTAGCCACCGGAGACCAGCCGGCCGACATCG
AAGACCAGATCCGAGGCATGTGCTTGCAGTACATCAAGAACCCGAACGCC
ATCATCCTCTCCGTAACGTCGGCGAACACCGACCTGGCCAACAGCGACGC
CCTCAAGATGGCGAGGGAGGTGGACCCCAAAGGGGACAGGACCGTCGGCG
TCCTCACCAAGATCGACCTCATGGACCCCGCAGGCACCGATGCTGGGGAC
ATGCTGGACAACCGAATTATCCCCCTCAAGCGAGGGTTCGTGGGTGTAAT
CAACCGCGGACAGAAGGACATCGATGATGGGGTCAGCATTCGGCAGCAGG
CACCGATGCTGGGGACATGCTGGACAACCGAATTATCCCCCTCAAGCGAG
GGTTCGTGGGTGTAATCAACCGCGGACAGAAGGACATCGATGATGGGGTC
AGCATTCGGCAGGCCCTTCAGAAGGAGGCGGCGTATTTCAGAGACCACCC
CGCCTACAAAGGCCTCGACAAGCGCGTTGGAACGACCAACCTTTCCAAGA
CCCTCAACCAGGCCCTTCAGAAGGAGGCGGCGTATTTCAGAGACCACCCC
GCCTACAAAGGCCTCGACAAGCGCGTTGGAACGACCAACCTTTCCAAGAC
CCTCAACCAGATCTTGATGCACCACATCCGGGACTGTTTGCCAGAAATCA
AGAGCAAGCTGAACGTGATGATGCAGAGCGTGTCTCAAGAGCTGGCTGAG
CTCGGCGAGCCGACGGACTGCGTGTCCGGCGCCTCCCTCACGGCTACCTT
GATCTTGATGCACCACATCCGGGACTGTTTGCCAGAAATCAAGAGCAAGC
TGAACGTGATGATGCAGAGCGTGTCTCAAGAGCTGGCTGAGCTCGGCGAG
CCGACGGACTGCGTGTCCGGCGCCTCCCTCACGGCTACCTTGCTTACTCT
CTTGTCCAAGTTCGCGTCCAACTTCCACGCGGCGGTCGATGGCCGAGGCT
CGTCGCCGGACGGAATTGAGATGAACGAGCTGTACGGCGGGGCTAGGATA
AGCTTACTCTCTTGTCCAAGTTCGCGTCCAACTTCCACGCGGCGGTCGAT
GGCCGAGGCTCGTCGCCGGACGGAATTGAGATGAACGAGCTGTACGGCGG
GGCTAGGATAAGCTACATTTTCCACGAGATTTTCTCTCACAGCTTGGCCA
CCATCGACCCATTCGAGGGGCTCACGGACCAGGACATCCGAACGGCAATC
TACAACGCCAATGGCACCAGGCCTAGCCTCTTTGTGCCGGAGATGTCGTT
CGATCTGCTCGTTCGCAAGCAGATTGCCCGACTGGAACAGGTGATTCGAT
CCGTGTGTTGACTACATTTTCCACGAGATTTTCTCTCACAGCTTGGCCAC
CATCGACCCATTCGAGGGGCTCACGGACCAGGACATCCGAACGGCAATCT
ACAACGCCAATGGCACCAGGCCTAGCCTCTTTGTGCCGGAGATGTCGTTC
GATCTGCTCGTTCGCAAGCAGATTGCCCGACTGGAACAGGTGATTCGATC
CGTGTGTTGA
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