Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
D8LK84_ECTSI (Beta 1,3 exoglucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK84_ECTSI)
HSP 1 Score: 339 bits (869), Expect = 5.650e-115
Identity = 173/202 (85.64%), Postives = 181/202 (89.60%), Query Frame = 1
Query: 214 AAMRRALEADEPGKANTIDELHDRNNDAAKDEKGDPIGVWAPSSSKPVVLQPHQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDASQTCGGRAAFDAYKIVPRRGDENADGIALGDSPTTTDTAATSTT 819
AAMR +E D PGKANTIDEL D NND A DEKGDPIGV APSSSKP+ LQP++D+G GSP+AIT A EHVGCFTLSRMEVFLRNRITDNPRAST +RVNSKADMTPQECAGICAGGG DVFAVSRGDLFTCLSEADSAGFL GRGNGVCNSPCTGDASQTCGG AAFDAYKIVPR DENADGIALG+SPTTTDTA TS T
Sbjct: 3 AAMRTVVERDAPGKANTIDELPDMNNDDATDEKGDPIGVLAPSSSKPIALQPNKDNGAGSPMAITAAPEHVGCFTLSRMEVFLRNRITDNPRASTLVRVNSKADMTPQECAGICAGGGHDVFAVSRGDLFTCLSEADSAGFLGGRGNGVCNSPCTGDASQTCGGHAAFDAYKIVPRGDDENADGIALGNSPTTTDTATTSPT 204
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
A0A6H5J7Z3_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z3_9PHAE)
HSP 1 Score: 295 bits (755), Expect = 1.990e-97
Identity = 153/187 (81.82%), Postives = 165/187 (88.24%), Query Frame = 1
Query: 265 IDELHDRNNDAAKDEKGDPIGVWAPSSSKPVVLQ-PHQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDASQTCGGRAAFDAYKIVPRRGDENADGIALGDSPTTTDTAATSTTA 822
+ +L D N DAA DE+G IGV APSSSKPVVL+ P++D+GVGSP+AIT A EHVGCFTL+RMEVFLRNRI DNPR ST +RV+SKADMTP ECAGICAGGGSD FAVSRGDLFTCLSE DS GFLRGRGNGVCNSPCTGDASQTCGG AAFDAYKIV R DENADGIALGDSP+TTDTAATSTTA
Sbjct: 27 VHQLPDMNYDAATDEEGHTIGVLAPSSSKPVVLEEPNEDNGVGSPMAITAAPEHVGCFTLTRMEVFLRNRIIDNPRGSTLVRVHSKADMTPLECAGICAGGGSDGFAVSRGDLFTCLSEGDSGGFLRGRGNGVCNSPCTGDASQTCGGHAAFDAYKIVSRGDDENADGIALGDSPSTTDTAATSTTA 213
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
D8LK89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK89_ECTSI)
HSP 1 Score: 176 bits (446), Expect = 1.720e-52
Identity = 88/98 (89.80%), Postives = 90/98 (91.84%), Query Frame = 1
Query: 397 VAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDAS 690
+AIT A EHVGCFTLSRMEVFLRNRITDNPRAST +RVNSKADMTPQEC GICAGGGS VFAVSR DLFT LSEADSAGFL GRGNGVCNSPCTGDAS
Sbjct: 1 MAITAAPEHVGCFTLSRMEVFLRNRITDNPRASTLVRVNSKADMTPQECVGICAGGGSVVFAVSRCDLFTSLSEADSAGFLGGRGNGVCNSPCTGDAS 98
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
A0A6H5KIS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS5_9PHAE)
HSP 1 Score: 111 bits (278), Expect = 2.680e-27
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 292 DAAKDEKGDPIGVWAPSSSKPVVLQP-HQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTP 534
D A DE+G IGV APSSSKPV+L+ ++D+ VG P+AIT A EHVGCF LSR+EVFLRNRITDNPR ST LRV SKAD+TP
Sbjct: 4 DVATDEEGHTIGVLAPSSSKPVILEESNEDNRVGLPMAITAAPEHVGCFMLSRVEVFLRNRITDNPRGSTLLRVYSKADITP 85
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI)
HSP 1 Score: 113 bits (282), Expect = 3.540e-24
Identity = 62/140 (44.29%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 319 PIGVWAPSSSKPV--VLQPHQDSGVGSPVAITVAAEHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDASQTCGGRAAFDAYKI 732
P + SSS+P +L +D+ + + EHVGC L+ E+ RI A V + DMTPQ+CA IC GGG D FAV+RGDL TC +EAD AG R GVC++PCTGD+SQ CGG +FD Y++
Sbjct: 1416 PGSNYGDSSSRPFQPLLSVDEDATTTTAASTHDRFEHVGCLKLTEEEMISLGRIETKAEADIIPGVFGRDDMTPQQCAVICEGGGQDGFAVTRGDLCTCFAEAD-AGIFEDRKGGVCDAPCTGDSSQPCGGVGSFDVYRL 1554
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
A0A6H5KL41_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL41_9PHAE)
HSP 1 Score: 101 bits (252), Expect = 4.330e-22
Identity = 60/138 (43.48%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 418 EHVGCFTLSRMEVFLRNRITDNPRASTPLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDASQTCGGRAAFDAYKI----------VPRRGDENAD--GIALGDSPTTT 795
EHVGC L+ E+ RI A V + DMTP CA IC G G D FAV+RGDL TC +EAD+ G R GVC++PCTGD+SQ CGG +FD Y++ +PR D G+ + D TTT
Sbjct: 85 EHVGCLKLAEEEMVSLRRIKTKAEADIIPGVFGRDDMTPLGCAAICEGRGQDGFAVTRGDLCTCFTEADT-GIFDDRKGGVCDAPCTGDSSQPCGGVDSFDVYQLSLTEGHDRNQLPRHATVTVDNTGLPVNDETTTT 221
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)
HSP 1 Score: 62.8 bits (151), Expect = 3.340e-7
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 1
Query: 418 EHVGCFTLSRMEVFLRNRITDNPRASTPL-RVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLR-GRGNGVCNSPCTGDASQTCGGRAAFDAYKIV 735
EHVGC+ LS P AS L +++ + MT C CA +D FA+ +G + TC +E G+L G+C++PC+GD + TCGG +D Y+++
Sbjct: 3185 EHVGCYALS-------------PTASVELEKLDGEEQMTKMLCFEACAAESADYFALFKGSVCTCGNEG---GYLTMPMEMGICDTPCSGDVTATCGGYYDYDLYELM 3276
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Match:
A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE)
HSP 1 Score: 57.4 bits (137), Expect = 1.650e-5
Identity = 36/106 (33.96%), Postives = 47/106 (44.34%), Query Frame = 1
Query: 418 EHVGCFTLSRMEVFLRNRITDNPRAST---PLRVNSKADMTPQECAGICAGGGSDVFAVSRGDLFTCLSEADSAGFLRGRGNGVCNSPCTGDASQTCGGRAAFDAY 726
E++GC+ I DN + S+ L + MTP C C G+D+F V G C D+ L G VC+ PC GD S TCGG A DA+
Sbjct: 779 EYLGCY------------IDDNDKFSSRILQLAYTASDSMTPMMCEDFCRSSGADIFGVEFGHQCFCGDSRDTD--LARYGTTVCDHPCAGDDSVTCGGHLAVDAF 870
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1023.210.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 8
0 1 Expect = 5.65e-115 / Id = 85.64 Expect = 1.99e-97 / Id = 81.82 Expect = 1.72e-52 / Id = 89.80 Expect = 2.68e-27 / Id = 70.73 Expect = 3.54e-24 / Id = 44.29 Expect = 4.33e-22 / Id = 43.48 Expect = 3.34e-7 / Id = 34.26 Expect = 1.65e-5 / Id = 33.96 Sequence D8LK84_ECTSI A0A6H5J7Z3_9PHAE D8LK89_ECTSI A0A6H5KIS5_9PHAE D8LKF8_ECTSI A0A6H5KL41_9PHAE D7FJ68_ECTSI A0A6H5KS07_9PHAE back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1023.210.1
>prot_E-siliculosus-1a_F_contig1023.210.1 ID=prot_E-siliculosus-1a_F_contig1023.210.1|Name=mRNA_E-siliculosus-1a_F_contig1023.210.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=301bp
HTPHSSAGAELQCIEQGPTPIKAPSEALQGSIAPVVEIDGDSSSDEDAIP back to top mRNA from alignment at E-siliculosus-1a_F_contig1023:13696..18415-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1023.210.1 ID=mRNA_E-siliculosus-1a_F_contig1023.210.1|Name=mRNA_E-siliculosus-1a_F_contig1023.210.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4720bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1023:13696..18415- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CACACTCCACACTCTTCTGCTGGCGCTGAACTACAGTGCATAGAGCAGGG
CCCAACCCCAATCAAA GTGAGTGAGATCAGCTCCTGGTCCCCTACCAGTC
GGGTTCGCCCACATGTCGCAATCGCATTACATCTGTAGATCTGGAGTCGC
GTACGCAACAAGAGGTTTGTCTGGGTTCATCGGCGGTGTGGTGTGGTCTA
TTTTTGTAGCTGTTGTCACTTGTTTTGCTCTTTCCGGGCGGGGGCGATGT
GGATCGGACGACTCTGCTTCGACTTCGACGTCGCCAACCACTCGCGCCGC
TCCCGGCGTAGTGACTGTTGTTAGCCAACTATGTAGCCCTCTGGAGGATT
GCTCGCTACTCTGCGCCCTTGTCAACCCTCTTGAGAGGAAGAGCCACCGA
ACCAACCCATGGTTGACCGATGGTATGCATACAACCCATGTCCGTTGAAG
CAAGTTTTTTTTTTAGTTTTTTTTTTGCTACGAAAACCTGCGGGTGAACC
CATCATGCACCATGAATAACGAATAACAGCAGACCAGCACTTGGCCGCTG
AGTTAGTATATGTACACCAGCAGTCCGGCTCTGTCGTATTGAGCAACACC
CCCCCCGCACTTCAAGCGGACTTTCCTTCTTTCCTTCTCTGATGATGCTG
AGCTTTAAGGAGGAATAAATACACGCACAGAAAGACTACCCATTCGAGAT
ATACCCACAGTCGAACGGAACTGAGCTTTGCCGCCCTCCGTGCGGCCCTC
CATGCGGCGACCATGCATGGGTAGCAGTACACTAAGTTTGGTGTCTGCAC
GCCGACAAATTTCCTGCACCTAATGTTGGAAATATGTGTATCTCTTTTCC
CGGTACTTGTACGATAACGATTTCGAAGAGCACAAACGAGGCAGCAGCAG
CACACATCTTCCCGCACTTTGGGCAGAAATGCTATTCATGCTATACACAT
GTAGCATGGCTGCTGTTTGGGTCTCCTGAACATGGCAACGCAAACGTATT
GTGATTTGCAGAGTCGGCAATCTGCTCTGAACGGAAGAGGAGTTTGCCCT
CAGCCTCTGTACATTTATCCTTTGGCGTCCCATGGCACGGTCCATGGGAC
GGTCCATACTTTGTTCAATAGAGTAAATGGTACATGAGTTGATGCATGCA
TAGACTACTGCTGCTGTTGTTGCCGAATTCTTGGGGAAGAAATCTCCAGT
CCCAGGATTTGCGATGATGCTGTATTGGATGTACACCAGACATCAGAGAT
GTTCTTTCCTATGTCGAAGACCCACCCTATATTACTACTCAATTTTCTCT
CATCCACATTCTGTCATATTGTGTAGAGGTTTGCCAGTAGCAGCCGTTGA
ATAGACTATCCCACCAACCCAACACTTCAACCCGACAGTGCCTTTCCTCC
ATCCCCCGAGAGCATCACGTATACGTGCTTCTCTTCTACGGAGCTCGCGT
GTGCATTTAAACGTGTCCACGAGATCAGGCTAGAATGCGAGAAGGATGAG
AAAGTACTTCGGATGTGTTGCCTTTTGCTGCTGTGCGATGACGGCACAAT
CCATTGCCAATCTCGGAAACGACGCTCCTTTTGGCCATCCACAACGAAAA
TTGGGGTGTTGACATTTCTTTTCTTGCGTACGTCACGCTGCGCACGCTGC
ACGCATGGACAGGCCCCTTCCGAAGCGCTGCAAGGCAGCATCGCACCGGT
CGTCGAGATCGATGGCGACAGCAGCTCCGACGAAGACGCTATCCCTGCCA
CCGCTGCCACTACCGCTACCCCCGTAGGCGAGAGCGGCAACACGTCGGAC
CCCCAGCACGCTGCCATGAGGAGGGCTCTAGAAGCGGATGAACCGGGCAA
GGCCAACACGATCGACGAG GTGGGAGCCCCTCCCGATACCGACTGCTGGG
GGTCCTTGACCTCCACCTCCGCCTTGACCTGCACCACCGGCAACAACGAC
GCTCTTCCCGTTCAGCCGCTGCCCGGCATTGACGACGACCACACCACGAG
TGAAAAGGACGACTCGGCCGACCCTGTCATTCCTACCCCGGAGCCCGTCT
TTTTGGAAGAATTAGTCATGCCCAATTCTTCCAGAATGACTGGCTTCGAG
GAAGGAGCCAGAACGCCGACTGTGTCGTCTTTTTCGTCGTTGGCCGCGTC
GTTATCCTTGTCTGGCAACGGCTGAACGGGAAGAGCGTCGTTGTTGCAGG
TGGTGCAGGTCAAGGTGGAGGTGGAGGTCAAAATGTGAAAATAATCTGAA
ATGCACACAAAGGACAGTTTACAGTTTTGATTGCTGATTTATTGTTGTGG
TAGAAACGTGGGGTAATCTCCCCGTGCTGACGTGTTTTTTGTAATTTCTC
CGCACCGATGTATTTTTGAAGGTGTCGAAGTGGAGTGTACACGATATGGG
AGAAGCGGCCGGGAAAGTCAGTAATTTGACGACTTGTTTGCATATTTGCA
GAATAATGATGTTGTGAAGAACAGATAAATGCCGAGGAAGTCATAACGTT
GAGCGTTGAGCTTCACCACCACCACCACCACCTCCTCCTCGACCTCAACC
TCAACCTCAACCTCCACCACCGGCAACAACGACGCTCTTCCCGTTCACCA
GCTGCACGACAGGAACAACGACGCCGCCAAGGACGAGAAAGGCGACCCAA
TCGGTGTTTGGGCTCCTTCGTCGTCAAAGCCAGTCGTTCTACAACCGCAC
CAGGACAGCGGGGTTGGCTCGCCCGTGGCCATCACTGTCGCCGCTGAGCA
CGTTGGCTGCTTCACGTTGAGCCGGATGGAGGTGTTCCTTCGCAACCGGA
TCACCGACAACCCCAGAGCTTCGACACCCCTGCGGGTGAACAGCAAGGCC
GACATGACCCCCCAG GTAAGCTGGTGGACCCGTCAACTCAGCGACCGATC
CCCGACTGCGCTGCATGATGAGTCCCGCCTAGACACGCCGTGCATTTGCT
CGCGAGGAATCAAGCTGTTCCTATTGAGACTTTCAAGCGGTTGGTCGTGG
GTTGGTAGCGTGACGTTTCTCCGCGCGATCAAAGAGTTTTACTTACACTT
GACCCTGCTGTCTTTTCACACATTTTACGTCTCTGTTGTCTTCGCTGACT
GGCCCTGCTCCCCGTTCCCCCATCTCTCTCAAGGAGTGTGCTGGTATCTG
TGCCGGTGGGGGAAGCGACGTCTTCGCGGTCAGCAGAGGCGACCTGTTCA
CCTGCTTGTCGGAAGCAGACTCTGCCGGTTTCCTCCGCGGCAGGGGGAAT
GGCGTGTGCAACTCCCCCTGTACCGGCGACGCTTCACAAACGTGCGGAGG
ACGTGCCGCGTTTGACGCGTACAAGATAGTCCCCAGGAGAGGCGACGAGA
ACGCCGACGGCATCGCCTTGGGCGACTCACCTACCACCACCGATACCGCC
GCAACCTCCACAACTGCCG GTAAGACAAGGGAATGCCGGGGTTTTACTCT
CACTGTACTGTAGCTGATTCTCCTTGCGTGTATGCGTGGGCACAGGTCGG
TCTGTACAAAGCTGCTCTTTAGCGCGTAAAGCACGGGCCTCACGGCAGCT
CATGCACCCTGTCTGTGTGTGCATACGTGGGCAGAGGTCGTCGAAACGGT
CTGTTCAAACCTGCCAGCATAGTGTGTAGAGCACGGGGTAGGTACCATCA
CGTGGTGCTTTCCTCTTCTTCCTTGAACTGCGTGTGTTGTCCGTTGGCAA
CCGCACATTCATCGCCCTAGGGTAAAGCCCCTCGTGTACAAATGCGTCAG
TCGTTGCTAAGGGCGTTGTAGATCTCGAGGCCAATACGAACCACGGCCGA
TGTTTCCTGCAGCAAAAACCGCTCGCTTCTTGACCGCACGTGTTTTTCTC
GATCTCACTCCCCGACACGCTGCACTGAGGTTTCGGCGTGGATGTGCTTT
CATCCTTCTTGCCTTTAATGTACGTGTGCTTTGGACGTTGCTTGTCTGAG
ACCTACCAAGTTTGGAGAAGTCCAGCGATTGGGACGTGGGTTCTAAGTTT
CCCGACTACGAGCAGCCCCCTTATTTCTGTCTCTGGCAACGTCGTGAGGT
CAATCGCTCCATCTTTTTCTTCTCAACGTGCTGGTTTTTATATTCAAGCA
CCACCAGTATCATTTGACATGTCTGACGCCTCAAGAGTATTTTTTTGGCA
GGTGTACAACTTTGCTTGCGAAGTAAATCTACGATGCGCCGCCTCAGCAG
TGGTGTTTAGTACAGGAGGTGCTCTAGCGCCAACCAGCAGCACGCAACAG
AACAAAATTGTTGTCGGAAAAAAGTGACAGTGGAACGCGATCAATACCGA
CATGTTGAACTAACACGTGAACCAAGATTAACTGATTCGGAAAAACGGTT
TTCTTCGCCCCCTTATCCGCTTTGTTTCGCCCCGATATTGTTCTTGTCGT
GATGGCGTGATGTAAATTGTTGTTTGAACAGTAGAAGGTCTCAGCGTGGG
GGCAAAGCCAACAACCGACCGCATGCCTCACCCGGAAATGTTCCGTTGTT
CCCAGGGACGCTGAGTTTGCGTTTTTTTTCTTGGCACCTCTATATTCCGA
GGAAATTGGTTGATGTCGATTGATATACGAACGTTCTCTCCGCGCGCCCT
GTCGATTCCCGACTCGGGTACCCCCGTCCTTGCTGACAGAAGGAAAGGAA
GCGTTAAACGATGTACCCAGTGACGTCGCCGGCATCGCCACCGGCACCGC
CGACCTCAGCGATGACGAC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1023:13696..18415-
>mRNA_E-siliculosus-1a_F_contig1023.210.1 ID=mRNA_E-siliculosus-1a_F_contig1023.210.1|Name=mRNA_E-siliculosus-1a_F_contig1023.210.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1806bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1023:13696..18415- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top