mRNA_E-siliculosus-1a_F_contig135.2091.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE) HSP 1 Score: 306 bits (783), Expect = 1.620e-86 Identity = 149/201 (74.13%), Postives = 162/201 (80.60%), Query Frame = 3
Query: 747 VRVLPGIAVRGGIGFGRGVFTLKSLELGLAPNAAPHETTTGD-KMAGYDATFHDTRYQGSEGDAFPRKMRIGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDLVFLSSVM 1346
VR IAVRGGIGFGR V+ LK LEL LA NAAPH TTT + K+ GYDA FHDTRY+ EGD R+MRIGPDGHHE+NHGP+CR YSG+TTCKDI GVNLTRHESDHGVK +Y RSINNMTFPNFTYSLSVINELQNRKYN+Q L LL + H S+ GC AALWTCGRCFC KPLVRVFDCFGRLDLV LS V+
Sbjct: 948 VRERAAIAVRGGIGFGRDVYALKELELSLARNAAPHATTTEEGKVVGYDAIFHDTRYKNFEGDPIKREMRIGPDGHHENNHGPDCRKLYSGLTTCKDIGGVNLTRHESDHGVKVMYLRSINNMTFPNFTYSLSVINELQNRKYNRQLLDALLSRVDGHASPSMSGCQAALWTCGRCFCDKPLVRVFDCFGRLDLVCLSFVL 1148
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5KPQ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ6_9PHAE) HSP 1 Score: 203 bits (517), Expect = 4.690e-57 Identity = 98/202 (48.51%), Postives = 131/202 (64.85%), Query Frame = 3
Query: 756 LPGIAVRGGIGFGRGVFTLKSLELGLAPNAAPHETTTGDKMAGYDATFHDTRYQGSEGDAFPRKMR-----IGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDLVFLSSVM 1346
LP A R GIG G GV ++ +L++ LA + PHE+ K+AGYD +HDT + + KM +GPDG HE NH EC+ +YSG TTC ++AG+NL HE DH KA+Y RS+N MT NFT++L VINE QN+ +N++ L LL + H S GC AALW CGR FC KP++RVFDC GR+D+V L++V+
Sbjct: 21 LPESATRCGIGGGDGVHSIMALQIALAVDVPPHESAKNFKVAGYDCVWHDTTFDDKSSEHAKYKMWQSGMFVGPDGPHEKNHSKECQRQYSGFTTCDELAGINLNPHEQDHSKKALYLRSLNTMTSSNFTFALRVINERQNQGFNRKTLRTLLASVTEHPKDSFAGCEAALWRCGRRFCGKPVMRVFDCLGRVDIVMLATVL 222
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5KGV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV9_9PHAE) HSP 1 Score: 199 bits (506), Expect = 2.360e-54 Identity = 96/204 (47.06%), Postives = 131/204 (64.22%), Query Frame = 3
Query: 750 RVLPGIAVRGGIGFGRGVFTLKSLELGLAPNAAPHETTTGDKMAGYDATFHDTRYQGSEGDAFPRKMR-----IGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDLVFLSSVM 1346
R + A+R GIG G GV ++ +L++ LA + PHE+ K+AGYD +HDT + + KM +GPDG HE NH EC+ +YSG TTC ++AG+NL HE DH KA+ RS+N MTF NFT++L VINE QN+ +N++ L LL + S GC AALW CGRCFC K ++RVFDC GR+D+V L++V+
Sbjct: 106 RKIAESAIRCGIGCGDGVHSIMALQIALAVDVPPHESAKNFKVAGYDCVWHDTTFDDKSSEHAKYKMWQSGMFVGPDGPHEKNHSKECQRQYSGFTTCDELAGINLNPHEQDHSKKALCLRSLNTMTFSNFTFALRVINERQNQGFNRKTLRTLLASVTELPKDSFDGCEAALWRCGRCFCGKSVMRVFDCLGRVDIVMLATVL 309
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5KXC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC8_9PHAE) HSP 1 Score: 169 bits (429), Expect = 6.190e-42 Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 3
Query: 792 GRGVFTLKSLELGLAPNAAPHETTTGDKMAGYDATFHDTRYQGSEGDAFPRKMR-----IGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDLVFLSSVM 1346
G GV+++ +L++ LA + PHE+ K+AGYD + D + + KM +GPDG H N EC+ +YSG TTC ++AG+NL E DH KA+Y RS+N MTF FT++L V+NE QN+ N++ L L + H C ALW GRCFC KP++RVFDC GR+D+V L++++
Sbjct: 287 GDGVYSIMALQIALAVDVPPHESAENFKVAGYDCVWQDNTFDDMSSEHVKYKMWQSGIFVGPDGPHAKNRSKECQRQYSGFTTCDELAGINLNPPEQDHSKKALYLRSLNTMTFSGFTFALRVLNERQNQGCNRKTLRTHLPSVTEHAKDIFASCEVALWRYGRCFCRKPVMRVFDCLGRVDIVMLATML 476
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5KCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW5_9PHAE) HSP 1 Score: 164 bits (416), Expect = 4.330e-40 Identity = 85/196 (43.37%), Postives = 118/196 (60.20%), Query Frame = 3
Query: 768 AVRGGIGFGRGVFTLKSLELGLAPNAAPHETTTGDKMAGYDATFHDTRYQGSEGDAFPRKM---RIGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDLVFLSSVM 1346
A+R GIG G G+ ++ L++ LA + P E+ ++AGYD +HDT + + KM I H + A SG TTC ++AG+NL HE DH KA+ RS+N MTF NFT++L VINE Q++ +N++ L LL I H S GC A LW CGRCFC KP++RVFDC GR+D+V L++V+
Sbjct: 293 AIRCGIGCGDGMHSIMVLQIALAVDVPPRESAKNFEVAGYDCVWHDTTFDDKSSEHAKYKMWQSGILWAQTHLTRRTTARSASNSGFTTCDELAGINLNPHEQDHSKKALCLRSLNTMTFSNFTFALRVINERQDQGFNRKTLRTLLASITEHPKDSFAGCEATLWRCGRCFCRKPVMRVFDCLGRVDIVMLATVL 488
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.730e-30 Identity = 68/193 (35.23%), Postives = 109/193 (56.48%), Query Frame = 3
Query: 771 VRGGIGFGRGVFTLKSLELGLAPNAAPHETTTGDKMAGY--DATFHDTRYQGSEGDAFPRK---MRIGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDLVFL 1334
+R G+GFG ++K+L++ L+ + K+ GY D F T + G + K + +GPDG HE NH C+AK+ G+T C+ I G N HE +H K + S+ M F FT+++++INEL+N K N++ + + + H + +P C +W+CGRCFCSKPL+R FD G+L + ++
Sbjct: 374 IRSGVGFGVAEHSVKALQIALSSDCVGGGVGEDGKLPGYSIDFNFKRTPSYDNYGHFYGGKRVGLWLGPDGPHEGNHQGSCQAKFGGLTRCRQITGTNCNPHEQNHSKKIKFLPSVTGMGFDTFTFNVTLINELENVKINRKTCTLAVSSASGHPRHRLPACRKEVWSCGRCFCSKPLMRSFDKLGKLCISYM 566
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5JIR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR9_9PHAE) HSP 1 Score: 119 bits (298), Expect = 2.320e-27 Identity = 60/156 (38.46%), Postives = 88/156 (56.41%), Query Frame = 3
Query: 873 KMAGYDATFHDTRYQ--GSEGDAFPRK---MRIGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDL 1325
K+ GY +F+ R + G G + + + +GPDG HE NH C+ K G+ C + GVN HE +H K + S++ M F FTY++++INEL+N K N++ V + H + C +WTCGRCFCSKPL+R FD FG+L +
Sbjct: 17 KLPGYGVSFNFKRERSFGEFGHFYDGQRVGLWLGPDGPHEGNHQGPCQMKDGGVFRCPQLTGVNCNVHEQNHEKKTKHLPSVSGMGFDTFTYNITLINELENVKINRKTCSVAVSSAIEHPHERLHACRKEVWTCGRCFCSKPLMRSFDQFGKLRI 172
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5JV99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV99_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.780e-24 Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 3
Query: 873 KMAGYDATFHDTRYQ--GSEGDAFPRK---MRIGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDL 1325
K+ GY +F+ R + G G + + + +GPDG HE NH C+ KY G + C + GVN HE H K + S + M F FT+++++IN+L+N K N++ V + H + C +WTCGRCFCSKPL+R FD FG L +
Sbjct: 199 KLPGYGVSFNFKRERSFGKFGHFYDGQRVGLWLGPDGPHEGNHQGPCQMKYGGESRCPQLTGVNCNVHEQKHSKKPRHLPSGSVMGFDTFTFNITLINDLENVKINRKTCSVAVSSATEHPHERLHACRKEVWTCGRCFCSKPLIRSFDQFGELRI 354
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE) HSP 1 Score: 118 bits (296), Expect = 7.340e-24 Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 3
Query: 771 VRGGIGFGRGVFTLKSLELGLAPNAAP---HETTTGDKMAGYDATFHDTRYQ--GSEGDAFPRK---MRIGPDGHHESNHGPECRAKYSGMTTCKDIAGVNLTRHESDHGVKAVYFRSINNMTFPNFTYSLSVINELQNRKYNKQFLGVLLKGIAVHTPYSVPGCHAALWTCGRCFCSKPLVRVFDCFGRLDLVF 1331
V+ G+GFG ++ +L++ L+ ++ E K+ GY +F+ R + G G + + + +GPDG HE NH C+ KY G++ C GVN HE +H K S++ M F FT+++ +INEL+N K N++ V + + C +WTCGRCFCSKPL+R FD F +V+
Sbjct: 352 VQAGVGFGVAEHSVTALQMALSSDSLTIWGGELDKDGKLPGYGVSFNFKRERSFGEFGHCYDGQRVGVWLGPDGPHEGNHQGHCQMKYGGVSRCPQPTGVNCNAHEQNHSKKTKRLPSVSGMGFDTFTFNIILINELENVKINRKTWIVAVSSATELLYERLHACRKEVWTCGRCFCSKPLMRSFDQFDLFQMVY 546
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Match: A0A6H5JLJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLJ6_9PHAE) HSP 1 Score: 108 bits (270), Expect = 2.980e-21 Identity = 57/94 (60.64%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 22 WVVHTPMGAGEGDIITHADGASFLLPVLVALSGSRQASKVSALPSWLDPKWISEGDVATGLRGYAEAKEKFVVDGLRPLTPEARQRAGVYG*GD 303
WV P+ EG THAD A FLL VLV LSGSRQASKVSALPSWL I EG++ATGLR YA+AK F+VD L+ LT EA++R V GD
Sbjct: 355 WVARAPLEGDEGGGFTHADAAGFLLRVLVGLSGSRQASKVSALPSWLHATCIPEGELATGLRRYAKAKVDFIVDCLKALTAEAKEREQVRRCGD 448 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig135.2091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig135.2091.1 >prot_E-siliculosus-1a_F_contig135.2091.1 ID=prot_E-siliculosus-1a_F_contig135.2091.1|Name=mRNA_E-siliculosus-1a_F_contig135.2091.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=160bp MAGYDATFHDTRYQGSEGDAFPRKMRIGPDGHHESNHGPECRAKYSGMTTback to top mRNA from alignment at E-siliculosus-1a_F_contig135:78347..81173+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig135.2091.1 ID=mRNA_E-siliculosus-1a_F_contig135.2091.1|Name=mRNA_E-siliculosus-1a_F_contig135.2091.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2827bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig135:78347..81173+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig135:78347..81173+ >mRNA_E-siliculosus-1a_F_contig135.2091.1 ID=mRNA_E-siliculosus-1a_F_contig135.2091.1|Name=mRNA_E-siliculosus-1a_F_contig135.2091.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=960bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig135:78347..81173+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |