Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
A0A6H5KV41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV41_9PHAE)
HSP 1 Score: 570 bits (1470), Expect = 1.320e-195
Identity = 277/325 (85.23%), Postives = 291/325 (89.54%), Query Frame = 1
Query: 763 EDFTAGDETSNTGAIHQGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRGQEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDFEKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSPS 1737
ED TAGD T++ I QGTV KTFV WWR RQLSLVD+STL+LCK+ G KSCQDMPLDSSTEVVRVE KHG KDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMS+LE VTT D +KE DFFGDTPRAG+ G+SFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLE+TE+GDLILRQGDIPAY D PLWAHRV GSVG TANGGLGCAVE WW+RATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLG+SPR GGWRVHLPWDSHGKALKAASLQLR+GS VMATEDGHILWSSSPS
Sbjct: 292 EDSTAGDATAHND-IRQGTVRVKTFVSWWRPRQLSLVDSSTLRLCKMARVGGAKSCQDMPLDSSTEVVRVEDKHGTTSKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSVLEGVTTRDTQKETDFFGDTPRAGDLGNSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLELTEVGDLILRQGDIPAYPTDDTPLWAHRVTGSVGGTANGGLGCAVEAWWERATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGQSPRPVGGWRVHLPWDSHGKALKAASLQLRNGSVVMATEDGHILWSSSPS 615
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI)
HSP 1 Score: 574 bits (1479), Expect = 1.720e-193
Identity = 279/324 (86.11%), Postives = 292/324 (90.12%), Query Frame = 1
Query: 766 DFTAGDETSNTGAIHQGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRGQEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDFEKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSPS 1737
DFTAGD +N I QGTV KTFV WWR RQL+LVDASTLKLCK+ G KSCQDMPLDSSTEVVRVE KHGRPRKDGRFVFRVSTG PRGLTNKRWELDAGSSADLD MS+LE VTT DFEKEAD F DTPRAG+ GDSFKFSMELGPFTFAPTPAFRGDSIS+DDYPLIPGQFLSTAPVV+SANLEVTE+GDLILRQGDIPAY + PLWAHRV GSVG TANGGLGCAVE WW+RATNGG+DMG+PVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ+RDGS VMATEDGHILWSSSPS
Sbjct: 543 DFTAGDAKTNNN-IRQGTVKVKTFVSWWRPRQLTLVDASTLKLCKMARGGGVKSCQDMPLDSSTEVVRVESKHGRPRKDGRFVFRVSTGIPRGLTNKRWELDAGSSADLDTLMSVLEGVTTPDFEKEADVFADTPRAGDLGDSFKFSMELGPFTFAPTPAFRGDSISIDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTANGGLGCAVEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQVRDGSVVMATEDGHILWSSSPS 865
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
D8LK83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK83_ECTSI)
HSP 1 Score: 517 bits (1332), Expect = 7.440e-180
Identity = 250/279 (89.61%), Postives = 257/279 (92.11%), Query Frame = 1
Query: 901 ITLRGQEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDFEKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSPS 1737
+T GQEKSCQDMPLDSSTEV RVEGKHGRPRKDGRFVFRVSTGTPRGL NK WELDAGSSA LD WMS+LE VTT D +KEA F GDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVV+SANLEVTE+GDLILRQGDIPAY D KPLWAHRV GSVG TAN LGCA+E WW RATNGG+DMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQL DGSAVMATEDGHILWSSSPS
Sbjct: 1 MTRAGQEKSCQDMPLDSSTEVARVEGKHGRPRKDGRFVFRVSTGTPRGLKNKAWELDAGSSAALDMWMSVLEGVTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTDHKPLWAHRVTGSVGGTANWRLGCALEVWWDRATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLCDGSAVMATEDGHILWSSSPS 279
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
D8LK90_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK90_ECTSI)
HSP 1 Score: 512 bits (1318), Expect = 3.690e-177
Identity = 251/311 (80.71%), Postives = 264/311 (84.89%), Query Frame = 1
Query: 805 IHQGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRGQEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDFEKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSPS 1737
I QGTVN KTFVRWW+ RQLSLVD LKLCK+T GQEKSCQ +VVRVEGKHGRPRKDGRFVFRVSTGTPRGL NK EL+AGSSA LD WMS+LE VTT D +KEA F GDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQ LSTAPVVDSANLEVTE+GDL+LR+GDIPAY D KPLWAHRV GSVG TAN LGCA+E WW RATNGG+ MGVPVHL VKNGRWRVGRGWMCTLGR P VAGGWRVHLPWDSHGK LKAA LQL DGS VMAT +G + WSSSPS
Sbjct: 11 IRQGTVNLKTFVRWWKPRQLSLVDGFVLKLCKMTRAGQEKSCQ------FNQVVRVEGKHGRPRKDGRFVFRVSTGTPRGLKNKARELNAGSSAALDMWMSVLEGVTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQILSTAPVVDSANLEVTEVGDLVLRRGDIPAYPSDHKPLWAHRVTGSVGGTANWRLGCALEVWWHRATNGGEGMGVPVHLVVKNGRWRVGRGWMCTLGRIPSVAGGWRVHLPWDSHGKTLKAALLQLCDGSVVMATGEGDVAWSSSPS 315
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI)
HSP 1 Score: 533 bits (1372), Expect = 4.360e-168
Identity = 259/302 (85.76%), Postives = 272/302 (90.07%), Query Frame = 1
Query: 766 DFTAGDETSNTGAIHQGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRGQEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDFEKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ 1671
DFT GD +N I QGTV KTFV WWR RQL+LVDASTLKLCK+ G KSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTG PRGLTNKRWELDAGSSADLDK MS+LE VTT DFEKEADFF DTPRAG+ GDSFKFS ELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVV+SANLEVTE+GDLILRQGDIPAY + PLWAHRV GSVG TA+GGLGCA+E WW+RATNGG+DMG+PVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ
Sbjct: 1589 DFTDGDAKTNDN-IRQGTVKVKTFVSWWRPRQLTLVDASTLKLCKMARGGGVKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGVPRGLTNKRWELDAGSSADLDKRMSVLEGVTTRDFEKEADFFWDTPRAGDLGDSFKFSTELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTASGGLGCALEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ 1889
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
A0A6H5JC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC81_9PHAE)
HSP 1 Score: 483 bits (1244), Expect = 1.650e-166
Identity = 240/311 (77.17%), Postives = 252/311 (81.03%), Query Frame = 1
Query: 805 IHQGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRGQEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDFEKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSPS 1737
IHQGTVNAKTFVRWWRARQL+LVDASTLKLCKI+ RGQEKSCQ W+ DAGSS LD W+SLLE VTT D++KEADF+GDTPRAGNPGDSFKFS+ELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTE+GD+ILRQGDIPAY + KPLWAHR GSVG TA GGLGCAVE WW+RATNGGQDM VPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSS S
Sbjct: 11 IHQGTVNAKTFVRWWRARQLTLVDASTLKLCKISRRGQEKSCQ------------------------------------------WDFDAGSSLALDAWISLLEGVTTLDYQKEADFWGDTPRAGNPGDSFKFSIELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEVGDVILRQGDIPAYPTNPKPLWAHRATGSVGGTAKGGLGCAVEAWWERATNGGQDMRVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSSS 279
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
D8LKF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF0_ECTSI)
HSP 1 Score: 320 bits (820), Expect = 2.700e-103
Identity = 157/192 (81.77%), Postives = 166/192 (86.46%), Query Frame = 1
Query: 1162 DTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSPS 1737
DTPRA + G SFKFSMELGPFTFAPTP FRG+SISVDDYPLIPGQFLS APVV+SANLEVTE+ DLILRQGDIPAY L R G + NGGLGCAVE WW+RATNGG+DMGVPVHLA KNGRWRVGRGWMCTLGRSPRVAGGW+VHLPWDSHGKALKAASLQL DGS VM+TEDGHILWSSSPS
Sbjct: 36 DTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSISVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTNGGLGCAVEAWWERATNGGEDMGVPVHLAEKNGRWRVGRGWMCTLGRSPRVAGGWKVHLPWDSHGKALKAASLQLGDGSVVMSTEDGHILWSSSPS 226
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
D8LQD9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD9_ECTSI)
HSP 1 Score: 320 bits (821), Expect = 4.680e-100
Identity = 165/311 (53.05%), Postives = 211/311 (67.85%), Query Frame = 1
Query: 811 QGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRG--QEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDF---EKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSS 1728
+G V KT VR W+ LSLV S L+LC T RG SC++ PLD S+EVVR+ + +GRF+FRV +G PRG TN +W LDA S ++LD W+S+L ++E + P A N GDS S +LGP T +PAFRG S++ DYPL GQFLSTAP+VDS N+E+TEIGD+ILR GDIPA+S D+ PLWA+R GS GD A+GGLGC +E+WW+R G D +PVHL VKNGRWRVGRG +CT+G+SP+ G WR +LPWD+ G+A+K A L+LRDG+ V+ T G ILWSS
Sbjct: 145 EGKVLFKTMVRGWQPGDLSLVAGSALRLCH-TKRGFANHASCKEQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTKWTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLDGAPLAQNLGDSSVTSSKLGPDTPEVSPAFRGQSMAPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGDIPAFSGDKSPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTYD-DIPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGEILWSS 453
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
D8LQD2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD2_ECTSI)
HSP 1 Score: 310 bits (793), Expect = 8.650e-98
Identity = 161/311 (51.77%), Postives = 207/311 (66.56%), Query Frame = 1
Query: 811 QGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRG--QEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDF---EKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEIGDLILRQGDIPAYSMDQKPLWAHRVAGSVGDTANGGLGCAVETWWQRATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSS 1728
+G V KT VR W+ LSLV S L+LC T RG SC++ PLD S+EVVR+ + +GRF+FRV +G PRG TN +W LDA S ++LD W+S+L ++E + P A N GDS S +L P T +PAFRG +S DYPL GQFLSTA +VDS N+E+TEIGD+I+R GDIPA+S D+ PLWA+R GS GD A+GGLGC +E+WW+R G D +PVHL VKNGRWRVGRG +CT+G+SP+ G WR +LPWD+ G+A+K A L+LRDG+ V+ T G LWSS
Sbjct: 5 EGKVLFKTMVRGWQPGDLSLVAGSVLRLCH-TKRGFANHASCKEQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTKWTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLDGAPLAQNLGDSSVTSSKLEPDTPDASPAFRGHVMSPGDYPLQTGQFLSTASLVDSTNVEITEIGDVIVRAGDIPAFSGDKPPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTDD-DIPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGETLWSS 313
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Match:
A0A6H5KF80_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF80_9PHAE)
HSP 1 Score: 240 bits (613), Expect = 6.120e-73
Identity = 118/146 (80.82%), Postives = 125/146 (85.62%), Query Frame = 1
Query: 805 IHQGTVNAKTFVRWWRARQLSLVDASTLKLCKITLRGQEKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSLLERVTTHDFEKEADFFGDTPRAGNPGDSFKFSMELGPFTFAPTP 1242
I QGTV KTFV WW R LSLVDASTL+LCK+ G +SCQDMPLDSSTEVVRVEGKHGR RKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMS+LE VTT D +KE DFFGDT RAG+ G+SFKFSMELGPFTFA P
Sbjct: 11 IRQGTVRVKTFVSWWWPRLLSLVDASTLRLCKMAHGGGARSCQDMPLDSSTEVVRVEGKHGRTRKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSVLEGVTTRDTQKETDFFGDTTRAGDLGNSFKFSMELGPFTFARRP 156
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1023.209.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 17
0 1 Expect = 1.32e-195 / Id = 85.23 Expect = 1.72e-193 / Id = 86.11 Expect = 7.44e-180 / Id = 89.61 Expect = 3.69e-177 / Id = 80.71 Expect = 4.36e-168 / Id = 85.76 Expect = 1.65e-166 / Id = 77.17 Expect = 2.70e-103 / Id = 81.77 Expect = 4.68e-100 / Id = 53.05 Expect = 8.65e-98 / Id = 51.77 Expect = 6.12e-73 / Id = 80.82 Sequence A0A6H5KV41_9PHAE D8LKF2_ECTSI D8LK83_ECTSI D8LK90_ECTSI D8LKF8_ECTSI A0A6H5JC81_9PHAE D8LKF0_ECTSI D8LQD9_ECTSI D8LQD2_ECTSI A0A6H5KF80_9PHAE Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 1 Cds size 1743 Model size 1743 Exons 6 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko01000,ko01002 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. M EC 5.4.2.3 Ec32 ortholog Ec-16_002400.1 Ec32 ortholog description Carbohydrate-binding WSC EggNOG OGs COG0449@1,KOG1268@2759 EggNOG free text desc. glutamine-fructose-6-phosphate transaminase (isomerizing) activity GOs GO:0003674,GO:0003824,GO:0004044,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006518,GO:0006575,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0009056,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0019538,GO:0032991,GO:0034641,GO:0042219,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044424,GO:0044464,GO:0051186,GO:0051187,GO:0061672,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368 KEGG Pathway ko00520,ko01100,ko01130,map00520,map01100,map01130 KEGG Reaction R08193 KEGG ko ko:K01836,ko:K14262,ko:K18802 KEGG rclass RC00408 Preferred name DUG3 Seed eggNOG ortholog 2880.D8LKF2 Seed ortholog evalue 4.4e-162 Seed ortholog score 578.2 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1023.209.1
>prot_E-siliculosus-1a_F_contig1023.209.1 ID=prot_E-siliculosus-1a_F_contig1023.209.1|Name=mRNA_E-siliculosus-1a_F_contig1023.209.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=581bp
DDVNNDGNNNNNNDDGTAISNDSSSSDDDVDSSSSSSNNNNNNNNSNNNK back to top mRNA from alignment at E-siliculosus-1a_F_contig1023:10286..13564-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1023.209.1 ID=mRNA_E-siliculosus-1a_F_contig1023.209.1|Name=mRNA_E-siliculosus-1a_F_contig1023.209.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3279bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1023:10286..13564- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GACGATGTTAACAACGACGGCAACAACAACAACAACAACGACGACGGCAC
AGCGATCAGCAACGACAGTAGCAGCAGCGACGACGACGTCGACAGCAGCA
GCAGCAGCAGCAACAACAACAACAACAACAACAACAGCAACAACAACAAA
AACAACAACAACAACAACAACAACGACAACGACAACGACAACAACAACAA
CAACGACGGCACAGCGATCAGCAACGACAGTAGCAGCAGCGACGACGACG
TCGGCAGCAGCAGCGGCAAGGACGATGTTAACAACGACGGCAACAACAAC
GACGACGACGACGACGACGACGGCACAGCGATCAGCAACGACAGTAGCAG
CAGCGACGACGAC GTCGACAGCAGCAGCAGCAAAAACAACAGCAGCAGCA
ACAACAACAACAACAACGACAACGACAACGACAACAAGAACGACGACATA
GCGATCAGCAACGACAGTAGCAGCAGCAACAACAACAACAACAACAACAA
CAACAACAACAACAACGACAACGACAATGACAACGACAACGACAACAAGA
CCGACAACACAGTGATCAGCAACGACAGTAGCAGCAGCGACGACGACATC
GACAGCAGCAGCAGCAGCAACATCAACAACACCAACGACAACAACAACAA
CAACGGCGGCACAGCGATCAGCAACGACAATAGCAGCAGCGACGACGACG
ACGACAACAGCAGCAGCAGCGGCGGCAGTGGCAACGGCAGCGACAACAAC
GATAACTTCAACAACGGCAACGACAACAACAACAACGACAACAACAACAA
TCACAACAACGGCAACGGCAACGAAGGCCCAGGCCCAGAAGACTTCACCG
CCGGCGACGAAACATCCAACACCGGAGCG GTGAGAAAAAAACCGCAGAAA
CTTGTTTACCTCTCTGAATATGGCAATCGTTCTCTACAGTTAGTTGGATG
GTGTTGCGGCCATCAGTGGGTCAGTAGCGGAATCGTGAACTTGAGCTTGA
GGCATTTTTCAACTGTACGGTAGAGACAACGAGCAATCTGGATGTCAACA
TGTCAACACGATGGAAGATTTGTGCTTCATAGACGCGGCGGGGACAGATG
AGGTAGCCTCATAGTCAGGATTCCAGCATCCACTCACTCACCCACCCACC
CACCACACACACTCGCTGTGGGGGAGTTCCAGCGCTCCGTACAGGATAGG
TAGATAGGTTGCCCCACCTCCACAGACCCGCCGAAAAGCTTGTTAATGAT
CCTCCTCCAAACCCTCGTTGTGCAGATTCACCAGGGGACTGTCAATGCCA
AGACCTTCGTCCGATGGTGGAGGGCACGCCAGCTCTCCCTTGTGGACGCG
TCAACCCTAAAGCTGTGTAAAATAACGCTCAGAGGGCAGGAGAAGTCTTG
CCAG GTATGTACCTTGCTATGCCCTTAGTTTGCTTGCCCCCATGTGTTGC
ACCCAACAAACTCAATTGAGGTTGAAACCAAACGAACATTTTTTGTTGCC
CTCATGGAGCGCTCGCATCAGGCGTTCATGCAGTAGAGACTCGTGAGGTA
GAATCTAAGCGCGACTTGTGTTTGATGCTCAACAAACTGTCCCTTCCTCC
CTCTCAACAAACTCCATGGGAACACAGGCCATGTATTCGGAAGGCCTGTC
TGGGCAGTCAAGAGCACACACATAGGTGTGGAATGCTGTGCGAAAAATCA
CCCCCATGCCTTGCACAGCAGTCAAGTATCGTACCTCTCTCGTCCTGTTT
TCCCTGCGGTTTTTTCATAACCCTCTCTGCGTGTTATTCTCGTTTGACGT
GCCACCTGCCAACTCTTAGGACATGCCCTTGGATAGTTCGACCGAGGTGG
TACGGGTCGAGGGTAAGCACGGGAGGCCCAGGAAGGACGGACGCTTCGTA
TTCCGTGTTTCGACAGGAACTCCTAGAGGCCTGACGAACAAACGG GTGAG
CAAACTCGATTTTCATGCAACACACACCTCATTCATGTCTTGCACCAAGC
TTGGTTTCTATCCGTATGTTCAAAAATTCATCTGACAAAGCGAAAGAGGA
TGTTGCGCTATCGCGTACTCTCGAGCCAGCTAGCAAGAGATGGCCGTAAA
CGATGCACGCAAGAGCTGCAGTACCTCACGCTGCAACAACCACCACGCCA
GCTTCTCACGCGTACCTAGCCAACCATCACTTTGTCGATTGCTCTCCGTC
CGTGTTCGTCCTGGCGTTGATGGTCCACTTTCCGTCGTTCCGATGTACAA
ACCACCCGCCCTTGTCTCGCACTGCTGTATTTGCTAACGATGCCTTCCTT
CACAGTGGGAGCTCGATGCGGGAAGCTCCGCAGATTTGGACAAGTGGATG
TCGCTCTTGGAGCGGGTCACAACGCACGATTTCGAGAAGGAGGCAGATTT
TTTCGGG GTAAGTACTCGTTGTTGTTCTTTTTCAATAGACTGTACGTGTT
TGGCAAGGGGCGGGGGCGTGTTGTCGATGCCGTATACTAGCTGTCGTTGT
TGGTGTTGGCGTTGCAGTCGTTTCTCTTCAACGCGTTGTCGCTTCTGTGT
CTGTATTCTAGCCGGTAGCCGACGGTGCAGCGTACGGTAACAATAGTAGC
CTCCAGTTCCACGAAGCACCTAATAGACAAACCTCTTCCGTTCCATGCAC
CTATCCAACTCTGCAACATGCACTCGTGCGACACGCAACTATTGCAGGAC
ACTCCGCGGGCTGGCAACCCGGGTGACTCTTTCAAGTTCTCGATGGAGCT
CGGGCCGTTCACGTTCGCCCCCACGCCCGCCTTCCGTGGCGACAGCATTT
CGGTCGATGACTACCCCCTGATCCCCGGCCAGTTCCTCTCGACGGCACCG
GTCGTCGATTCCGCCAACCTGGAGGTGACGGAGATCGGCGACCTGATTTT
GCGGCAGGGCGACATACCGGCCTACTCGATGGACCAGAAACCGCTCTGGG
CCCACCGGGTTGCGGGGTCGGTCGGGGACACCGCCAACGGGGGGCTAGGG
TGTGCTGTAGAGACATGGTGGCAGAGGGCCACAAACGGTGGCCAAGACAT
GGGCGTCCCCGTCCACTTGGCCGTGAAGAACGGCAGGTGGAGGGTCGGCA
GAGGATGGATGTGTACCTTGGGCCGAAGCCCCAGGGTGGCAGGAGGGTGG
AGGGTCCACCTCCCGTGGGACTCCCACGGGAAGGCCCTCAAGGCGGCATC
GTTGCAGCTTCGCGACGGCAGTGCCGTGATGGCCACGGAAGACGGCCACA
TCCTATGGAGCTCTTCGCCCTCTTCGTAA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1023:10286..13564-
>mRNA_E-siliculosus-1a_F_contig1023.209.1 ID=mRNA_E-siliculosus-1a_F_contig1023.209.1|Name=mRNA_E-siliculosus-1a_F_contig1023.209.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3486bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1023:10286..13564- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top