mRNA_E-siliculosus-1a_F_contig10224.207.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10224.207.1
Unique NamemRNA_E-siliculosus-1a_F_contig10224.207.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: D8LQB3_ECTSI (Inositol-3-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQB3_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 6.040e-162
Identity = 233/234 (99.57%), Postives = 233/234 (99.57%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702
            QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEID L
Sbjct:  282 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDGL 515
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A7S1ZAK2_TRICV (Inositol-3-phosphate synthase n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZAK2_TRICV)

HSP 1 Score: 389 bits (999), Expect = 2.840e-135
Identity = 190/235 (80.85%), Postives = 209/235 (88.94%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702
            QN FVPGVIELA +HKV++ GDDFKSGQTKMKSV++DFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN+ML++E EHPDHVVVIKYVPYV DSKRA+DEYT+EIFMGGKNTI MHNTCEDSLLA+PLI+DLVI+ ELCERI VKK+G  KWE FH VLSLLSYMLKAPLVP G PVVNALF QR A+INVMRAC GL P+NHM LEHR +S +  L
Sbjct:    5 QNPFVPGVIELARQHKVFVAGDDFKSGQTKMKSVLIDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRMLFEEDEHPDHVVVIKYVPYVADSKRAMDEYTNEIFMGGKNTIVMHNTCEDSLLATPLIYDLVILGELCERITVKKDGEDKWEAFHPVLSLLSYMLKAPLVPSGAPVVNALFTQRCAVINVMRACLGLGPDNHMTLEHRFESTLSEL 239
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A2P4Y6M5_9STRA (Inositol-3-phosphate synthase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y6M5_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 3.590e-133
Identity = 193/234 (82.48%), Postives = 216/234 (92.31%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGG-KWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDA 699
            QNTFVPGV++LAEE KV++GGDDFKSGQTKMKSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVVVIKYVP+VGDSKRALDEYTS+IFM G NTISMHNTCEDSLLASPLI DLV++ E+ ERI +KKEG  ++E  HSVLS+LSYMLKAPLVP GTPVVNALFAQR+ +IN+ RAC GLAPE+HMLLE+RL SEI+A
Sbjct:  188 QNTFVPGVLDLAEEKKVFVGGDDFKSGQTKMKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVIKYVPFVGDSKRALDEYTSKIFMNGNNTISMHNTCEDSLLASPLILDLVLICEIAERITLKKEGAAEFEHMHSVLSILSYMLKAPLVPRGTPVVNALFAQRECMINIFRACVGLAPESHMLLENRLASEINA 421
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A662X127_9STRA (Inositol-3-phosphate synthase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X127_9STRA)

HSP 1 Score: 385 bits (990), Expect = 5.120e-133
Identity = 190/234 (81.20%), Postives = 214/234 (91.45%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGK-WEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDA 699
            QNTFVPGV++LAEE KV++GGDDFKSGQTK+KSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKEGEHPDHVVVIKYVP+VGDSKRALDEYTS+IFM G NTISMHNTCEDSLLA+PLI DL+I+ EL ER+ +KKEG   +E  HS+LS+LSYMLKAPLVP GTPVVNALFAQR+ +INV RAC GL  ENHMLLE++L SEI+A
Sbjct:   75 QNTFVPGVLDLAEEKKVFVGGDDFKSGQTKIKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKEGEHPDHVVVIKYVPFVGDSKRALDEYTSKIFMNGNNTISMHNTCEDSLLATPLILDLLIVCELAERVTIKKEGAAGFEHLHSILSILSYMLKAPLVPRGTPVVNALFAQRECMINVFRACVGLPAENHMLLENKLASEINA 308
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A7S0CGN9_9STRA (Inositol-3-phosphate synthase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGN9_9STRA)

HSP 1 Score: 382 bits (982), Expect = 2.080e-132
Identity = 182/232 (78.45%), Postives = 210/232 (90.52%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGG-KWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEI 693
            QNTFVPG++ELA ++KV+I GDDFKSGQTK+KSV+ DFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN++LY+EGEHPDH +VIKYVPYVGDSKRA+DEYTSEIFMGG NTI+MHNTCEDSLLA+PLI+DLV+++ELCERI  KKEG  +WE FH VLSLLSY++KAPLVP G PV+NALF QR AI+N+MRAC GLAP+NHM LEHR +S +
Sbjct:   16 QNTFVPGIVELARQNKVFIAGDDFKSGQTKIKSVLTDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRILYEEGEHPDHTIVIKYVPYVGDSKRAMDEYTSEIFMGGINTIAMHNTCEDSLLATPLIYDLVLLSELCERINAKKEGEVEWESFHPVLSLLSYLIKAPLVPDGAPVINALFTQRCAIVNLMRACVGLAPDNHMSLEHRFESTL 247
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: H3G8E9_PHYRM (Inositol-3-phosphate synthase n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G8E9_PHYRM)

HSP 1 Score: 391 bits (1005), Expect = 2.610e-132
Identity = 192/234 (82.05%), Postives = 216/234 (92.31%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGK-WEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDA 699
            QNTFVPGV++LAEE K+++GGDDFKSGQTKMKSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVVVIKYVP+VGDSKRALDEYTS+IFM G+NTISMHNTCEDSLLASPLI DLV++ EL ERI +KKEG K +E  HS+LS+LSYMLKAPLVP GTPVVNALFAQR+ +IN+ RAC GL PE+HMLLE++L SEIDA
Sbjct:  282 QNTFVPGVLDLAEEKKIFVGGDDFKSGQTKMKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVIKYVPFVGDSKRALDEYTSKIFMNGQNTISMHNTCEDSLLASPLILDLVLVCELAERITLKKEGAKDFEHLHSILSILSYMLKAPLVPRGTPVVNALFAQRECMINIFRACVGLTPESHMLLENKLASEIDA 515
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: B7FWI9_PHATC (Inositol-3-phosphate synthase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWI9_PHATC)

HSP 1 Score: 392 bits (1006), Expect = 2.760e-132
Identity = 192/235 (81.70%), Postives = 210/235 (89.36%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGK-WEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702
            QNTFVPGV+ELA +HKV+I GDDFKSGQTKMKSV+VDFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN++L++E EHPDHVVVIKYVPYV DSKRA+DEYTSEIFMGGKNTI MHNTCEDSLLA+PLI+DLVI+ ELCERI VKKEG + WE FH VLSLLSYMLKAPLVP G PVVNALF QR+A+INVMRAC GL P NHM LEHR +S +  L
Sbjct:  282 QNTFVPGVLELARQHKVFIAGDDFKSGQTKMKSVLVDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRILFEEDEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLATPLIYDLVILGELCERITVKKEGSEDWEAFHPVLSLLSYMLKAPLVPNGAPVVNALFTQREAVINVMRACLGLGPNNHMTLEHRFESSLKEL 516
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A7S1ZAL6_TRICV (Inositol-3-phosphate synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAL6_TRICV)

HSP 1 Score: 391 bits (1005), Expect = 3.800e-132
Identity = 191/235 (81.28%), Postives = 210/235 (89.36%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702
            QNTFVPGVIELA +HKV++ GDDFKSGQTKMKSV++DFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN+ML++E EHPDHVVVIKYVPYV DSKRA+DEYT+EIFMGGKNTI MHNTCEDSLLA+PLI+DLVI+ ELCERI VKK+G  KWE FH VLSLLSYMLKAPLVP G PVVNALF QR A+INVMRAC GL P+NHM LEHR +S +  L
Sbjct:  282 QNTFVPGVIELARQHKVFVAGDDFKSGQTKMKSVLIDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRMLFEEDEHPDHVVVIKYVPYVADSKRAMDEYTNEIFMGGKNTIVMHNTCEDSLLATPLIYDLVILGELCERITVKKDGEDKWEAFHPVLSLLSYMLKAPLVPSGAPVVNALFTQRCAVINVMRACLGLGPDNHMTLEHRFESTLSEL 516
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: M4BD01_HYAAE (Inositol-3-phosphate synthase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BD01_HYAAE)

HSP 1 Score: 389 bits (1000), Expect = 1.490e-131
Identity = 194/233 (83.26%), Postives = 214/233 (91.85%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEID 696
            QNTFVPGV++LAEE KV++GGDDFKSGQTK+KSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVVVIKYVPYVGDSKRALDEYTS+IFM G NTISMHNTCEDSLLASPLI DLV++ EL ERI +KKEG   +E  HSVLSLLSYMLKAPLVP GTPVVNALFAQR+ +IN+ RAC GLAPENHM+LE++L SEID
Sbjct:  282 QNTFVPGVLDLAEEKKVFVGGDDFKSGQTKIKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVIKYVPYVGDSKRALDEYTSKIFMNGTNTISMHNTCEDSLLASPLILDLVLICELAERITLKKEGVSDFEHLHSVLSLLSYMLKAPLVPRGTPVVNALFAQRECMINLFRACVGLAPENHMMLENKLFSEID 514
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BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A1E7FE24_9STRA (Inositol-3-phosphate synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE24_9STRA)

HSP 1 Score: 389 bits (999), Expect = 3.370e-131
Identity = 192/235 (81.70%), Postives = 211/235 (89.79%), Query Frame = 1 
Query:    1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702
            QNTFVPGV++LA   KV+I GDDFKSGQTKMKSV+VDFLV AGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV+SN++L++E EHPDHVVVIK+VPYVGDSKRALDEYTSEIFMGG NTISMHNTCEDSLLA+PLI+DLVI+AELC+RI VKKEG  +WE FH VLSLLSYMLKAPLVP G PVVNALF QRQAIINV+RAC GL PENHM LEHR +S +  L
Sbjct:  283 QNTFVPGVVDLARHKKVFIAGDDFKSGQTKMKSVLVDFLVGAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVESNRILFEEDEHPDHVVVIKHVPYVGDSKRALDEYTSEIFMGGVNTISMHNTCEDSLLATPLIYDLVILAELCDRISVKKEGESEWEQFHPVLSLLSYMLKAPLVPNGAPVVNALFTQRQAIINVLRACLGLGPENHMSLEHRFESNLAQL 517
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQB3_ECTSI6.040e-16299.57Inositol-3-phosphate synthase n=2 Tax=Ectocarpus T... [more]
A0A7S1ZAK2_TRICV2.840e-13580.85Inositol-3-phosphate synthase n=2 Tax=Mediophyceae... [more]
A0A2P4Y6M5_9STRA3.590e-13382.48Inositol-3-phosphate synthase (Fragment) n=1 Tax=P... [more]
A0A662X127_9STRA5.120e-13381.20Inositol-3-phosphate synthase (Fragment) n=2 Tax=N... [more]
A0A7S0CGN9_9STRA2.080e-13278.45Inositol-3-phosphate synthase n=1 Tax=Proboscia in... [more]
H3G8E9_PHYRM2.610e-13282.05Inositol-3-phosphate synthase n=23 Tax=Peronospora... [more]
B7FWI9_PHATC2.760e-13281.70Inositol-3-phosphate synthase n=1 Tax=Phaeodactylu... [more]
A0A7S1ZAL6_TRICV3.800e-13281.28Inositol-3-phosphate synthase n=1 Tax=Trieres chin... [more]
M4BD01_HYAAE1.490e-13183.26Inositol-3-phosphate synthase n=1 Tax=Hyaloperonos... [more]
A0A1E7FE24_9STRA3.370e-13181.70Inositol-3-phosphate synthase n=1 Tax=Fragilariops... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10224contigE-siliculosus-1a_F_contig10224:553..2528 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size702
Model size702
Exons5
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelBacillariophyta
COG Functional cat.I
EC5.5.1.4
Ec32 orthologEc-26_005440.1
Ec32 ortholog descriptionInositol-3-phosphate synthase
EggNOG OGs2XBJN@2836,COG1260@1,KOG0693@2759
EggNOG free text desc.Myo-inositol-1-phosphate synthase
GOsGO:0003674,GO:0003824,GO:0004512,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006020,GO:0006021,GO:0006066,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016853,GO:0016872,GO:0019637,GO:0019751,GO:0034637,GO:0043647,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046173,GO:0071704,GO:1901576,GO:1901615,GO:1901617
KEGG Pathwayko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130
KEGG ReactionR07324
KEGG koko:K01858
KEGG rclassRC01804
Preferred nameISYNA1
Seed eggNOG ortholog2850.Phatr45120
Seed ortholog evalue8.1e-107
Seed ortholog score393.3
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10224.207.1prot_E-siliculosus-1a_F_contig10224.207.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10224 553..2528 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927526.477044-CDS-E-siliculosus-1a_F_contig10224:552..6451622927526.477044-CDS-E-siliculosus-1a_F_contig10224:552..645Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 553..645 -
1696318567.8585598-CDS-E-siliculosus-1a_F_contig10224:552..6451696318567.8585598-CDS-E-siliculosus-1a_F_contig10224:552..645Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 553..645 -
1622927526.4958017-CDS-E-siliculosus-1a_F_contig10224:810..9361622927526.4958017-CDS-E-siliculosus-1a_F_contig10224:810..936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 811..936 -
1696318567.869408-CDS-E-siliculosus-1a_F_contig10224:810..9361696318567.869408-CDS-E-siliculosus-1a_F_contig10224:810..936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 811..936 -
1622927526.5129044-CDS-E-siliculosus-1a_F_contig10224:1305..14881622927526.5129044-CDS-E-siliculosus-1a_F_contig10224:1305..1488Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 1306..1488 -
1696318567.8880203-CDS-E-siliculosus-1a_F_contig10224:1305..14881696318567.8880203-CDS-E-siliculosus-1a_F_contig10224:1305..1488Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 1306..1488 -
1622927526.5255842-CDS-E-siliculosus-1a_F_contig10224:1796..19791622927526.5255842-CDS-E-siliculosus-1a_F_contig10224:1796..1979Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 1797..1979 -
1696318567.9052885-CDS-E-siliculosus-1a_F_contig10224:1796..19791696318567.9052885-CDS-E-siliculosus-1a_F_contig10224:1796..1979Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 1797..1979 -
1622927526.5376282-CDS-E-siliculosus-1a_F_contig10224:2411..25281622927526.5376282-CDS-E-siliculosus-1a_F_contig10224:2411..2528Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 2412..2528 -
1696318567.9266758-CDS-E-siliculosus-1a_F_contig10224:2411..25281696318567.9266758-CDS-E-siliculosus-1a_F_contig10224:2411..2528Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10224 2412..2528 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10224.207.1

>prot_E-siliculosus-1a_F_contig10224.207.1 ID=prot_E-siliculosus-1a_F_contig10224.207.1|Name=mRNA_E-siliculosus-1a_F_contig10224.207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=234bp
QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIV
SYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHV
VVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDL
VIMAELCERIQVKKEGGKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFA
QRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL
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mRNA from alignment at E-siliculosus-1a_F_contig10224:553..2528-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10224.207.1 ID=mRNA_E-siliculosus-1a_F_contig10224.207.1|Name=mRNA_E-siliculosus-1a_F_contig10224.207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1976bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10224:553..2528- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGAACACGTTCGTTCCCGGTGTGATCGAGCTGGCGGAAGAGCACAAGGT
GTACATCGGCGGAGACGACTTCAAGTCTGGACAGACCAAGATGAAGTCGG
TCATGGTCGATTTCCTGGTAAGAGAGATGATGCCGGGAGGAAGGTATAAC
AGCCTACCACCTACCCATGGTGCATGTTGTGCGCGTGTACAGTTAAGAAA
TTGGGCGTCGAAGAACTCGAAACATGGAAGTACACAGAAATACATGCTTC
CTTTCTCGAGAAAACGTTCGGGGTAGTATTGGACAGACCCACGTCTTCCT
CCCCCCCCCTCCCTCCGCCCATTGTTACGTTGCTGCCTCCTCACGCTCAC
GGCCCTTGGCTCTCGTCCTGTATATTTTGCCGTCTCGATGTTTGTTTTTT
CTTAGAAACATGCATGCAAATCACAGATACAGACCTTCCGTTCGAGACAA
TACCTCTGTCGAAGGGGATGTGCTGGAGTCTTTGCAGTGAGTTTTTGTTG
TGACGATTTTTGTCTCGGTCTCTTTCTCTCTTTTATTTTGTTCTGTCAGG
TGAGCGCCGGGATCAAGCCGACGTCGATCGTGTCGTACAACCACCTCGGG
AACAACGACGGCAGGAACCTCTCGGCGCCGCAGCAGTTCCGCTCGAAGGA
GATCAGCAAGTCCAACGTGGTGGACGACATGGTGGACTCGAACAAGATGC
TCTACAAGGAGGGCGAGCACCCTGACCACGTCGTGAGTGATTTTTTGTTC
TTTCTTGCCGGAAAATTTGAAGAAAAATTGTTTTCCTCTCTGCTGGAACA
TAACCTACCTCGTGGTACATGTACAAGTGGCCGCTTTAGGTGCTTTGGCA
CAGGAGCGGTAGCGAAGTCTTCTCTCGAATTGGGTCATACATCGACCGAT
CTATGCGATGTATGCCCCGGTCTACACCCTGCGTTGTTAAGCCCTGGCGT
TGAAATCGCTCGGTGGTGTATGTACGAAGCGCCAAAAACCTTGCAAACTT
ACGTGTCTCCCGCTTTTGGTGGCGTGACCGTCTATCGCAGGTGGTGATCA
AGTACGTGCCGTACGTGGGCGACTCGAAGCGCGCGCTGGACGAGTACACG
TCCGAGATCTTCATGGGTGGCAAGAACACCATCTCCATGCACAATACGTG
TGAGGACTCGCTGCTGGCAAGCCCCCTCATCTTCGACCTTGTCATCATGG
CGGAGCTTTGCGAGCGGATTCAGGTACACCTGCCTGCCTCCCTACATTTT
TGTCAATGGATAGTGGATTGTGGTAGTGCTGCGGCTTTCTCTGGTTAGTC
AGGTTCGCTTATTAACGCTCTTTCGGATTCTCAACTAAGGGCGATTCAAG
TGATCGGTCGTTCGTGTTGTTTGTTCGTTAACGTGGCCAGGTGAAGAAGG
AATAAACCATTTCTGTCTTCGTCGCACGTTGATCGTTTAGAAACTCTTGG
TCTTACAACTGCAGCTGTTGTGCCCTCCCCAGGCTGAGAAGGAAGGTGCA
GAAGGTGCGAGTCAGTCTTGTCTTATCCTATGTTAAGCGTTAAGACAAGC
TTGTCCTTAAGCTGCTGCTGCTGCCTTGCCCTCCCACCCCAGGTCAAGAA
GGAGGGCGGTAAGTGGGAGGGCTTCCACTCCGTGCTGAGCCTCCTGTCGT
ACATGCTCAAGGCTCCTCTCGTTCCCCCCGGCACCCCGGTGGTGAACGCG
CTCTTCGCCCAGCGTCAGGTCAGCTACCTTAACCCCACCACATCTCCATC
GTAAATATAATATTTGACGGATCGGTCGTCGGCGGATGTTGTTATCGTTG
TTTTCGTGCATGTGTGAAGGAAGACGCGGTTAGCGATGCCTCATTTCGCC
TTTCTTTCTTTTTCTGTCTCGGTCTGACCGCAGGCAATTATCAACGTGAT
GCGGGCGTGCGCCGGTCTCGCTCCGGAGAACCATATGCTCCTTGAGCACC
GCCTCAAATCGGAGATCGACGCTCTT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10224:553..2528-

>mRNA_E-siliculosus-1a_F_contig10224.207.1 ID=mRNA_E-siliculosus-1a_F_contig10224.207.1|Name=mRNA_E-siliculosus-1a_F_contig10224.207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10224:553..2528- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGAACACGTTCGTTCCCGGTGTGATCGAGCTGGCGGAAGAGCACAAGGT
GTACATCGGCGGAGACGACTTCAAGTCTGGACAGACCAAGATGAAGTCGG
TCATGGTCGATTTCCTGCAGAACACGTTCGTTCCCGGTGTGATCGAGCTG
GCGGAAGAGCACAAGGTGTACATCGGCGGAGACGACTTCAAGTCTGGACA
GACCAAGATGAAGTCGGTCATGGTCGATTTCCTGGTGAGCGCCGGGATCA
AGCCGACGTCGATCGTGTCGTACAACCACCTCGGGAACAACGACGGCAGG
AACCTCTCGGCGCCGCAGCAGTTCCGCTCGAAGGAGATCAGCAAGTCCAA
CGTGGTGGACGACATGGTGGACTCGAACAAGATGCTCTACAAGGAGGGCG
AGCACCCTGACCACGTCGTGAGCGCCGGGATCAAGCCGACGTCGATCGTG
TCGTACAACCACCTCGGGAACAACGACGGCAGGAACCTCTCGGCGCCGCA
GCAGTTCCGCTCGAAGGAGATCAGCAAGTCCAACGTGGTGGACGACATGG
TGGACTCGAACAAGATGCTCTACAAGGAGGGCGAGCACCCTGACCACGTC
GTGGTGATCAAGTACGTGCCGTACGTGGGCGACTCGAAGCGCGCGCTGGA
CGAGTACACGTCCGAGATCTTCATGGGTGGCAAGAACACCATCTCCATGC
ACAATACGTGTGAGGACTCGCTGCTGGCAAGCCCCCTCATCTTCGACCTT
GTCATCATGGCGGAGCTTTGCGAGCGGATTCAGGTGGTGATCAAGTACGT
GCCGTACGTGGGCGACTCGAAGCGCGCGCTGGACGAGTACACGTCCGAGA
TCTTCATGGGTGGCAAGAACACCATCTCCATGCACAATACGTGTGAGGAC
TCGCTGCTGGCAAGCCCCCTCATCTTCGACCTTGTCATCATGGCGGAGCT
TTGCGAGCGGATTCAGGTCAAGAAGGAGGGCGGTAAGTGGGAGGGCTTCC
ACTCCGTGCTGAGCCTCCTGTCGTACATGCTCAAGGCTCCTCTCGTTCCC
CCCGGCACCCCGGTGGTGAACGCGCTCTTCGCCCAGCGTCAGGTCAAGAA
GGAGGGCGGTAAGTGGGAGGGCTTCCACTCCGTGCTGAGCCTCCTGTCGT
ACATGCTCAAGGCTCCTCTCGTTCCCCCCGGCACCCCGGTGGTGAACGCG
CTCTTCGCCCAGCGTCAGGCAATTATCAACGTGATGCGGGCGTGCGCCGG
TCTCGCTCCGGAGAACCATATGCTCCTTGAGCACCGCCTCAAATCGGAGA
TCGACGCTCTTGCAATTATCAACGTGATGCGGGCGTGCGCCGGTCTCGCT
CCGGAGAACCATATGCTCCTTGAGCACCGCCTCAAATCGGAGATCGACGC
TCTT
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