prot_E-siliculosus-1a_F_contig13466.2069.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13466.2069.1
Unique Nameprot_E-siliculosus-1a_F_contig13466.2069.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length121
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: D1J703_ECTSI (Uncharacterized protein ycf19 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J703_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 9.840e-79
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0
Query:    1 MKFSLEGIGAYLYNFVDGRLPQQMTLNALTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSIIIY 120
            MKFSLEGIGAYLYNFVDGRLPQQMTLN LTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIA+TDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSIIIY
Sbjct:    1 MKFSLEGIGAYLYNFVDGRLPQQMTLNDLTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIAITDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSIIIY 120          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A7T8G5F0_SCYLO (Ycf19 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5F0_SCYLO)

HSP 1 Score: 196 bits (497), Expect = 1.050e-62
Identity = 93/119 (78.15%), Postives = 107/119 (89.92%), Query Frame = 0
Query:    1 MKFSLEGIGAYLYNFVDGRLPQQMTLNALTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSIII 119
            MK S+EG+G +LYNFVD RLPQ M LN LT +DYL LTILFTV+FLKGYYWALSIRF+VQWFPN+NPYIHP+FGLI +TDIFLKEF+ LLP I GMD+SAMMAF+CLEWMIRTL+SI+I
Sbjct:    2 MKLSIEGVGEFLYNFVDTRLPQGMVLNDLTGRDYLFLTILFTVLFLKGYYWALSIRFLVQWFPNVNPYIHPMFGLIVITDIFLKEFQGLLPTIFGMDMSAMMAFICLEWMIRTLESIVI 120          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A1I9LVX8_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVX8_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 6.840e-61
Identity = 90/119 (75.63%), Postives = 108/119 (90.76%), Query Frame = 0
Query:    1 MKFSLEGIGAYLYNFVDGRLPQQMTLNALTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSIII 119
            MKFS+EGI  ++YNFV+ RLPQ M LNALT++DY+ LTIL TV+FLK YYWALS+RF+VQWFPN+NPYIHP+FGLI +TDIFLKEF+ LLP ILGMD+SAM+AF+CLEWMIRTL+SIII
Sbjct:    1 MKFSMEGISIFIYNFVNNRLPQGMVLNALTKRDYIFLTILCTVLFLKSYYWALSVRFLVQWFPNVNPYIHPMFGLIVITDIFLKEFQGLLPNILGMDMSAMLAFVCLEWMIRTLESIII 119          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A6B7EZ30_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EZ30_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 3.100e-56
Identity = 86/108 (79.63%), Postives = 98/108 (90.74%), Query Frame = 0
Query:   12 LYNFVDGRLPQQMTLNALTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSIII 119
            +YNFV+ RLPQ M L+ L +KDYL LTILFTV+FLKGYYWALSIRFVVQWFPN+NPYIHP+FGLI +TDIFLKEF+ LLP I GMD+SAMMAF+CLEWMIRTL+SIII
Sbjct:    7 IYNFVNNRLPQGMVLDNLEKKDYLILTILFTVLFLKGYYWALSIRFVVQWFPNVNPYIHPMFGLIVITDIFLKEFQGLLPTIFGMDMSAMMAFICLEWMIRTLESIII 114          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A2R4QPX8_9PHAE (Conserved hypothetical plastid protein n=2 Tax=Fucus TaxID=3011 RepID=A0A2R4QPX8_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.540e-33
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 0
Query:   32 KDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSI 117
            KD L L I F  +FL+ YYW L++R  +QWFPNINPYIHP++ LI  T+ FLK+F+DLLP ILGMD+SAM AFLCLEWMIRTL+SI
Sbjct:   28 KDILNLIIYFMKVFLRQYYWVLTLRLSIQWFPNINPYIHPMYTLIFATEFFLKQFKDLLPIILGMDMSAMCAFLCLEWMIRTLESI 113          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A1L2F1J6_9PHAE (Ycf19 n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1J6_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 7.220e-32
Identity = 59/102 (57.84%), Postives = 73/102 (71.57%), Query Frame = 0
Query:   18 GRLPQQMTLNALTQ--KDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSI 117
            GR       N L    +D L   I F  +FL+ YYW L++R  +QWFPNINPYIHP++ LI  T+ FLK+F++LLP ILGMD+SAM AFLCLEW+IRTLDSI
Sbjct:   12 GRFESSQNFNPLNFEIRDILNFIIYFIKVFLRQYYWILTLRLSIQWFPNINPYIHPIYALIFSTEFFLKQFKNLLPIILGMDMSAMCAFLCLEWIIRTLDSI 113          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A8F0F7Z7_9PHAE (Uncharacterized protein n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7Z7_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.640e-31
Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 0
Query:   27 NALTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSI 117
            N  T  D L + + F  + L+ YYW L++R  +QWFPNINPYIHP++ L+  TD FLKEFE+++P ILGMD+S+M AF+CLEWMIRTL+SI
Sbjct:   25 NDFTTFDVLNMVVHFLKLALRQYYWILTLRLSIQWFPNINPYIHPMYSLLYATDFFLKEFEEIIPAILGMDMSSMCAFICLEWMIRTLESI 115          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A8F0F7C2_9PHAE (Uncharacterized protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7C2_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.300e-29
Identity = 48/71 (67.61%), Postives = 62/71 (87.32%), Query Frame = 0
Query:   46 LKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDS 116
            +K YYW L++RF VQWFPNINPYIHPL+GLI  TD+FL++FE+ LP ILG+D+S+M AF CLEWM++TLD+
Sbjct:   80 IKAYYWLLTLRFTVQWFPNINPYIHPLYGLIWATDLFLRQFENFLPDILGLDMSSMCAFACLEWMMQTLDA 150          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A8E5XRH1_9PHAE (Uncharacterized protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH1_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.060e-29
Identity = 47/74 (63.51%), Postives = 62/74 (83.78%), Query Frame = 0
Query:   47 KGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSIIIY 120
            K YYW L++R  +QWFPNINPY+HP++ L+ LTD FL+ FE L+P +LGMD+S+M+AF+CLEW+IRTLDSI  Y
Sbjct:   33 KSYYWILTLRLSMQWFPNINPYVHPMYALLYLTDPFLENFEGLVPNVLGMDMSSMLAFICLEWIIRTLDSIAFY 106          
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Match: A0A0S0GAB4_COSCS (Uncharacterized protein n=25 Tax=Laminariales TaxID=2886 RepID=A0A0S0GAB4_COSCS)

HSP 1 Score: 109 bits (272), Expect = 1.720e-28
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 0
Query:   27 NALTQKDYLALTILFTVMFLKGYYWALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSAMMAFLCLEWMIRTLDSI 117
            N  T+ + L L +   V  L+ YYW L++R  +QWFPNINPYIHP++ L+  TD FLKEF+D++P +LGMD+S+M AF+ LEW+IRTL+SI
Sbjct:   21 NDYTRAEMLNLLVTAMVAGLRQYYWILTLRLSIQWFPNINPYIHPMYSLLHATDFFLKEFDDIVPTVLGMDMSSMCAFIFLEWIIRTLESI 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13466.2069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J703_ECTSI9.840e-7998.33Uncharacterized protein ycf19 n=2 Tax=Ectocarpus s... [more]
A0A7T8G5F0_SCYLO1.050e-6278.15Ycf19 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0... [more]
A0A1I9LVX8_9PHAE6.840e-6175.63Uncharacterized protein n=1 Tax=Pleurocladia lacus... [more]
A0A6B7EZ30_9PHAE3.100e-5679.63Uncharacterized protein n=1 Tax=Cladosiphon okamur... [more]
A0A2R4QPX8_9PHAE1.540e-3367.44Conserved hypothetical plastid protein n=2 Tax=Fuc... [more]
A0A1L2F1J6_9PHAE7.220e-3257.84Ycf19 n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L... [more]
A0A8F0F7Z7_9PHAE1.640e-3158.24Uncharacterized protein n=2 Tax=Laminariales TaxID... [more]
A0A8F0F7C2_9PHAE1.300e-2967.61Uncharacterized protein n=1 Tax=Protohalopteris sp... [more]
A0A8E5XRH1_9PHAE2.060e-2963.51Uncharacterized protein n=1 Tax=Ishige okamurae Ta... [more]
A0A0S0GAB4_COSCS1.720e-2854.95Uncharacterized protein n=25 Tax=Laminariales TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 44..108
e-value: 6.1E-10
score: 39.4
IPR003425CCB3/YggTPANTHERPTHR33219FAMILY NOT NAMEDcoord: 44..113
NoneNo IPR availablePANTHERPTHR33219:SF1YLMG HOMOLOG PROTEIN 2, CHLOROPLASTICcoord: 44..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 34..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13466contigE-siliculosus-1a_F_contig13466:122..484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13466.2069.1mRNA_E-siliculosus-1a_F_contig13466.2069.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13466 122..484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13466.2069.1 ID=prot_E-siliculosus-1a_F_contig13466.2069.1|Name=mRNA_E-siliculosus-1a_F_contig13466.2069.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=121bp
MKFSLEGIGAYLYNFVDGRLPQQMTLNALTQKDYLALTILFTVMFLKGYY
WALSIRFVVQWFPNINPYIHPLFGLIALTDIFLKEFEDLLPPILGMDLSA
MMAFLCLEWMIRTLDSIIIY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT