mRNA_E-siliculosus-1a_F_contig1345.2063.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: D8LI38_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI38_ECTSI) HSP 1 Score: 1373 bits (3555), Expect = 0.000e+0 Identity = 757/838 (90.33%), Postives = 767/838 (91.53%), Query Frame = 1
Query: 262 MLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATGPGAAAEDTQQ-QQQVALDSAANEIAVVSEAELPFSAFFHEYAVPRRPVAILSGDGGAGGSGKPADVADGEEQGDLGDQAMNTTQQDGEEENGQQRVQDLVLSGIESCLPHSVDPALGTVDGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQRVHRTRPGAYTAPTACPAGANTLITVMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPSHTSAGDDADSKSSKXXXXXXXXXXXXXXXXXXXXXXXXXEREEHRSDSGHAEETTTSTASNPTREPLEEGFELEKTVADQQKQNFPMKSSLNEERVKDEKEDTSAGAKKEEPLTLDASDNTWNGHRRYSHHPSEGHHWPHEPKYCADVWREDSDDDSIVTRTNAQDVSAGDNLFVPSGGAVSWRAKAGGGAEDEGAIAVRLCYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASPSTDADSSEAGLDADGDSSATAGDNTGRKRRRLSSTEEEVGNEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFNVSFVPAATTNASSNTAGHGSGGGGYMEASGPGVFVGDPRLKSEHARDRDLLSLGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGSPGTHAVTLHFLPPPDHGGSPVSWYHVMSRPTGEHVLSKWQAVGMAPAPAPRLDVSVHDTEPQSVVVKVEHLVPGVAYQFRVCAQNDVG 2772
MLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATG GAAAEDTQQ QQQVALDSAANEIAVVSEAELPFSAFFHEYAVPRRPVAILSG GGAGGSGKPAD DGEEQGDLGDQAMNT QQDGEEENGQQRVQDL+LSGIESCL HSVDPALGT DGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQR+HRTRPGAYT PTACPAGANTLITVMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPS TSAGDD DSK XXXXXXXXXXXXXXXXXXXXXXXXX GHAEET TSTASNPTREPLEEGF LE+T ADQQKQNF M SSL+ RVKDE EDTS KKEEP TLDASD+T NGHRRYSHHPSE HHWPHEPKYCADVWREDS+D+SIVTRTNAQDVSAGDNLFVPSGGAVSWRAKAGGGAEDEGA AVR CYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSAS STDADS EAGLDADGDSSATAG+N GRKRRRLSSTEE VG EGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFN+SFVPAATTNASS AGHGSGGGGYME VFVGD RLKSEHARDRDLL+LGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGSPGTHAVTL FLPPPDHG VLSKWQAVGMAPAPAPRLDVSVHDTEPQSV VKVEHLVPGVAYQFRVCAQNDVG
Sbjct: 1 MLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATGAGAAAEDTQQHQQQVALDSAANEIAVVSEAELPFSAFFHEYAVPRRPVAILSGGGGAGGSGKPADATDGEEQGDLGDQAMNTAQQDGEEENGQQRVQDLILSGIESCLAHSVDPALGTADGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQRLHRTRPGAYTPPTACPAGANTLITVMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPSRTSAGDDGDSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHAEETITSTASNPTREPLEEGFGLERTTADQQKQNFSMMSSLDGARVKDETEDTSTSEKKEEPRTLDASDSTSNGHRRYSHHPSESHHWPHEPKYCADVWREDSEDNSIVTRTNAQDVSAGDNLFVPSGGAVSWRAKAGGGAEDEGATAVRFCYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASSSTDADSGEAGLDADGDSSATAGENAGRKRRRLSSTEE-VGEEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFNLSFVPAATTNASSQAAGHGSGGGGYME-----VFVGDSRLKSEHARDRDLLNLGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGSPGTHAVTLRFLPPPDHG-----------------VLSKWQAVGMAPAPAPRLDVSVHDTEPQSVAVKVEHLVPGVAYQFRVCAQNDVG 815
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A6H5KFC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC2_9PHAE) HSP 1 Score: 872 bits (2253), Expect = 3.410e-304 Identity = 520/768 (67.71%), Postives = 544/768 (70.83%), Query Frame = 1
Query: 1 MRRTRGQKPHCGGFLSGATTGRGTASVVPWMTMLFLVHSHFALAAHTVFLEPNMKEAWTALLSAGSXXXXXXXXXXXXXXAREVVDTMLADCHGRKSEGWGAECDRALYLESVLKKIDSSSSAGSTFATGPGAAAEDTQQQQQVALDSAANEIAVVSEAELPFSAFFHEYAVPRRPVAILSGDGGAGGSGKPADVADGEEQGDLGDQAMNTTQQDGEEENGQQRVQDLVLSGIESCLPHSVDPALGTVDGPLRACHDSLLESLPVPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQRVHRTRPGAYTAPTACPAGANTLITVMSGTLQVLVYSSADELPSLKPTFGNAPCSPVPSHTSAGDDADSKSSKXXXXXXXXXXXXXXXXXXXXXXXXXEREEHRSDSGHAEETTTSTASNPTREPLEEGFELEKTVADQQKQNFPMKSSLNEERVKDEKEDTSAGAKKEEPLTLDASDNTWNGHRRYSHHPSEGHHWPHEPKYCADVWREDSDDDSIVTR---------TNAQDVSAG---DNLFVPSGGAVSWRAKAGGGAEDEGAIAVRLCYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASPSTDADSSEAGLDADGDSSATAGDNTGRKRRRLSSTEEEVGNEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFNVSFVPAATTNASSNTAGHGSGGGGYMEASGPGVFV 2268
MRRTR KPH GG LSGATT RGTASVVPWMTMLFLVHS+F LA HTVFLE NMKEAWT LLSAG XXXXXXXXXXXX ARE+VDTMLADCHGRKSEGWGAECDRALYLE+VLKKIDSSSSAGS FATG GA AEDTQQQQQVALDSAANEIAV+ EAELPFSAFFHEYAVPRRPVAILSG GG GGSGKPAD ADG+EQGDLGDQAM+T QQDGEEENGQQRVQDL+LSGIESCLPHSVDPALGTVDGPLRACHDSLLESLP+PRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQR+HRTRPGAYT PTACPAGANTLITVMSGTLQVLVYSSAD+LPSLKPTFGNAPC PVPS TSAGDD DSK XXXXX XX HRS SGHAEETTTST NPTREPLEEGF LE+TVADQQKQNF M+SSLNE RVKDE EDTS+ AKKEEP TLDASDNT NGHRRYSHHPSE H+WPHEPKYCADVWREDS+D+SIVTR A D++ L VP WR RL +VD + +V L L P D P+VTACERTACTVEWT+SFVKQGQDQTRLGFN+SFVPAATTNASSN AGHGS GGGYMEASGPGVF
Sbjct: 1 MRRTRSHKPHFGG-LSGATTERGTASVVPWMTMLFLVHSNFVLATHTVFLETNMKEAWTVLLSAGXXXXXXXXXXXXX--AREIVDTMLADCHGRKSEGWGAECDRALYLETVLKKIDSSSSAGSIFATGAGATAEDTQQQQQVALDSAANEIAVIYEAELPFSAFFHEYAVPRRPVAILSGGGGVGGSGKPADAADGKEQGDLGDQAMDTAQQDGEEENGQQRVQDLILSGIESCLPHSVDPALGTVDGPLRACHDSLLESLPIPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQRIHRTRPGAYTPPTACPAGANTLITVMSGTLQVLVYSSADKLPSLKPTFGNAPCPPVPSRTSAGDDGDSKXXXXXXXXHENNGDEERFDVDNGTGEXXXXXXHRSGSGHAEETTTSTVLNPTREPLEEGFGLERTVADQQKQNFSMESSLNEARVKDETEDTSSSAKKEEPQTLDASDNTSNGHRRYSHHPSESHYWPHEPKYCADVWREDSEDNSIVTRYVVIALRYTRRAVDINLPFWPTYLEVPP---YHWRP--------------RLLHVDVNAIFAVHKVLGLTL---------------PTLDK-------------------------------------------------------------------------------------------PRVTACERTACTVEWTSSFVKQGQDQTRLGFNLSFVPAATTNASSNAAGHGSRGGGYMEASGPGVFA 642
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: D8LI37_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI37_ECTSI) HSP 1 Score: 431 bits (1109), Expect = 1.150e-139 Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 1
Query: 2854 MSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPIVILDDRASKIRVASNNSMFEDIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVERGDIPIV---LAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERLTAAAGAAAAHAESMAWTSLYDGWIDSMSSXXXXXXXXXXX---VGGGDWRTSSAL 3558
MSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGP V+LDDRASKIRVASNNS FEDIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVV+RGDIPIV LAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERLTAAAGAAAAHAESMAWTSLYDGW+DSMSSXXXXXXXXXXX VGGGDWRTSSAL
Sbjct: 1 MSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPTVVLDDRASKIRVASNNSAFEDIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVQRGDIPIVHKVLAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERLTAAAGAAAAHAESMAWTSLYDGWVDSMSSXXXXXXXXXXXXXXVGGGDWRTSSAL 241
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A6H5KSF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF4_9PHAE) HSP 1 Score: 228 bits (581), Expect = 2.060e-65 Identity = 128/142 (90.14%), Postives = 129/142 (90.85%), Query Frame = 1
Query: 1570 DVSAGDNLFVPSGGAVSWRAKAGGGAEDEGAIAVRLCYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASPSTDADSSEAGLDADGDSSATAGDNTGRKRRRLSSTEE 1995
DVSAGDNLFVPSGGAVSWRAKAGG EDE AIAVR CYVDASNFNSVKSQLPLY AVE GANGLLQAFRSPVFDTSMSRNPSTVSASEF EGGRKA SVNPSAS STDADSSEAGL ADGDSSATA N GRK+RRLSSTEE
Sbjct: 19 DVSAGDNLFVPSGGAVSWRAKAGGVTEDEEAIAVRFCYVDASNFNSVKSQLPLYGAVETGANGLLQAFRSPVFDTSMSRNPSTVSASEFLEGGRKAASVNPSASSSTDADSSEAGLGADGDSSATAVGNMGRKQRRLSSTEE 160
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A7S1XPP5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPP5_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.020e-51 Identity = 219/687 (31.88%), Postives = 306/687 (44.54%), Query Frame = 1
Query: 1468 PSEGHHWPHEPKYCADVWREDSDDDSIVTRTNAQDVSAGDNLFVPSGGAVSWRA-----KAGGGAEDEGA------IAVRLCYVDASNFNSVKSQLPLYAAVEAGANG-----LLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASPSTDADSSEAGLDADGDSSATAGDNTGRKRRRLSSTEEEVGNEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQ-GQDQTRLGFNVSFVPAATTNASSNTAGHGSGGGGYMEASGPGVFVGDPRLKSEHARDRDLLSLGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGS-PGTHAVTLHFLPPPDHGGSPVSWYHVMSRPT---GEHVLSKWQAVGMAPAPAPRLDVSVHDTEPQSVVVKVEHLVPGVAYQFRVCAQNDVGTSPWS----------APSEPVVVLATDAEDAKHRDFSMSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPIVILDDRASKIRVASNNSMFE-DIDVWTCHFSPRSFKVKSEVVVAQPADA-RSELENGR--FVRNRIVVVERGDIPIV---LAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPP----EGWAALDMPRPWLDVRVPVVLMLREDAERL 3402
P+ G +PHE + ++ W D D S T + AGD LFVP+ G + G ++E +A LC +DASN+ + ++ + AA A G LL A + +M R P+ S ++ +G P+ + + D+S AG+D G KRRR + E +Q KV + R P P V + R VEW + + D RLGFN+S+ N HG V + D R + + +D ++LGI T V D L PDT Y FSV + YG+ G SE SK ART V AP + P G +H+V L++ PP DHGG P + V R +H +W VG A + V+ + S+ V+HL+PG YQFRV A N G SPWS AP + D+ DA SG H H+ + N+T + T G IV L D A + V + + VW +SP SF V++++ +A+PA A R+E G V +R+++VERG P+V L AQ+AGALGVI+ DDGRC F Q CV GSD +G+AA D P W VR+P VL+L +D E L
Sbjct: 245 PTFGGEYPHEVGFPSNAW--DRTDMSYAEGT----LKAGDLLFVPASGLALAKGFPLTVDVPRGEDEEPETWESPPLAAVLCVIDASNYAAALDEVRVLAAAYPKAWGSFGRQLLSA------NLNMERTPTATSWEQYLQG----AVTEPAKTAGDEGDASLAGVD-------------GGKRRRPKKNFAQWQEE-KQWMAKVREHTLPRLPP-PVVASAGRNDAKVEWECDYKRPISNDVVRLGFNISYQSV------DNPEDHGV----------VTVDIEDVRKRPLY-QDAAAVNLGIESSVMSTTVAD--LEPDTAYEFSVVLFYGDAKGKASEVSKAARTMPVAAPGRFHKVPVGVVKDSHSVQLYWEPPLDHGGDPNMHFEVERRQQFNRADHADGQWVNVGKVQAFSA---VTEDEALKNSMTTLVDHLLPGSMYQFRVSAVNSEGRSPWSVYTAALETVKAPKFRPGAGSIDSGDAPVLHGHGSGAHRIHDAHKTGNMTAEATT---------------------GAIVNLHDHAHSLLVDGGDGGTNLQLAVWAAAWSPASFSVRAQLAMAEPATACRAEGGAGHPSVVHHRVLLVERGGCPLVQKVLTAQKAGALGVIIVDDGRCE-KFDQHCVPGSDKVLSEGQGFAAQDHPGDWRKVRIPAVLVLADDGEVL 856
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A7S2WLH8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLH8_9STRA) HSP 1 Score: 182 bits (462), Expect = 4.080e-44 Identity = 186/644 (28.88%), Postives = 275/644 (42.70%), Query Frame = 1
Query: 1582 GDNLFVPSGGAVSWRAKAGGGAEDEGAIAVRLCYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASPSTDADSSEAGLDADGDSSATAGDNTGRKRRRLSSTEEEVGNEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFNVSFVPAATTNASSNTAGHGSGGGGYMEASGPGVFVGDPRLKSEHARDRDLLSLGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAP----------EGSPGTHAVTLHFLPPPDHGGSPVSWYHVMSRPTGEHVLSKWQAVGMAPAPAPRLDVSVHDTEPQSVVVKVEHLVPGVAYQFRVCAQNDVG-----------TSPWSAPSEPVVVLATDAEDAKHRDFSMSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPIVILDDRASKIRVASNNSMFEDIDVWTCHFSPRSFKVKSEVVVAQPA-----------DARSELENGRFVRNRIVVVERGDIPIV---LAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPP--EGWAALDMPRPWLDVRVPVVLMLREDAERL 3402
G L +P G VS RA A + C+VDASNFN K L A V+ G+ S + DT+M R P + + S+ P +A S A DG S+A TGR RR ++++ E R + + P P + R T+ W + F+ + D T G+N+++ GH G+ + V +++ +HA D D +T Y++V + L PD Y F + V YGET+ P S S+ T ++AP + P +G +++ PP D GG+ V + V R E + W +G P VS + +++HL+P Y+FR+ A N +G T+P S E VV + HR + F E D A E A EVHGP+V L D + + + + VW H+SP+++KV +EV+V P R+ L N V++RI ++ERG +P+V AQ AGAL VIV DDG+C F QLC G+D +G+A LD+ PW +R+PVVLMLR DA++L
Sbjct: 92 GSLLVLPVGHVVSLRATG-----SSSATLFKYCFVDASNFNRAKEATALRAHVDPETRGMSSFLASLLLDTTMQRVPPSAALPWAAH----------SSWPRNEAVSETASAKEDGSSTAPK---TGRSRRGNRRSQKDWQAETRWKWRVIGLTLPTLSP--PTILDVGRRNVTLGWLSGFLVKAGDSTAYGYNITWH-----------RGHSREVAGWKQ-------VSHEQVEVQHAYD-DYHVHDLT----YSLVDE--LEPDVSYTFRIMVYYGETSSPSSASSRIVHTPALSAPSRMESPPVLWRRPSKQDKGKLTGTKLSIVASPPVDDGGADVKGFIVQRRHVQEEMHDDWVTLGSFPIHWVDHVVSDDGATEHRLAFELDHLLPNCDYEFRIAAYNKIGVAAPGTGSRLRTNPVSRAGEEVV------GGSGHRSMPLHHFRELDE--------DFHTDSAAEVREHLKALHSSTFFEVHGPVVTLSDLLQTVTLEKPGTGLT-LPVWVSHWSPKAYKVTAEVIVTDPPMGDLSEPNKLPSTRTPLHNAATVQHRIALMERGGVPLVHKAALAQDAGALAVIVTDDGKCT-EFDQLCCPGADKKFGDGFAKLDLAAPWEKIRIPVVLMLRADADKL 674
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A7S3UWA2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA2_HETAK) HSP 1 Score: 150 bits (379), Expect = 2.240e-36 Identity = 107/297 (36.03%), Postives = 142/297 (47.81%), Query Frame = 1
Query: 2536 FLPPPDHGGSPVSWYHVMSRPTGEHVLSKWQAVG-MAPAPAPRLDVSVHDTEPQSVVVKVEHLVPGVAYQFRVCAQNDVGTSPWSAPSEPVVVLATDAE-DAKHRDFSMSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPIVILDDRASKIRVA-SNNSMFEDIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVERGD-IPIV---LAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPP---EGWAALDMPRPWLDVRVPVVLMLREDAE 3396
+ PP D GG P++ YH+M T EH W+ +G P P + H V HL+PG AY F+V A+ G WSAPS P E D K + +G G + + + + + + HGP+V L D +++ V + WTC +SP++F V +E V A P A L N +R R+ +V RG +P+V L AQ AGALGVIV DDGRC +F Q CV G+D E WA D P PW VRVPVVL+L DAE
Sbjct: 8 WFPPEDDGGEPITGYHLMKLHTDEHTHDDWEFLGTFFPNFDPNMGGLCHT---------VPHLLPGTAYSFKVAARTAAGDGLWSAPSPPARTPLPQLEVDPKGKVTGGTGHVYGRGWDPITHTSFKKDMFEAPLHLETHSSDKKTSYDQHGPVVTLHDHEARLEVRRGGGGPAVAVAAWTCAWSPQAFSVTAEAVRADPFLADRPLRNKAVLRKRLALVGRGGGVPLVTKALRAQAAGALGVIVVDDGRCR-AFDQRCVRGADLAARGELWARGDRPGPWRGVRVPVVLVLAGDAE 294
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A8J2X4D2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4D2_9STRA) HSP 1 Score: 154 bits (390), Expect = 7.810e-35 Identity = 177/608 (29.11%), Postives = 252/608 (41.45%), Query Frame = 1
Query: 1666 AVRLCYVDASNFNSVKS------QLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASPSTDADSSEAGLDADGDSSATAGDNTGRKRRRLSSTEEEVGNEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFNVSFVPAATTNASSNTAGHGSGGGGYMEASGPGVFVGDPRLKSEHARDRDLLSLGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGSPGTHAVTLHFLPPPDHGGSPVSWYHVMSRP-TGEHVLSKWQAVGMAPAPAPRLDVSVHDTEPQSVVVKVEHLVPGVAYQFRVCAQNDVGTSPWSAPSEPVVVLATDAEDAKHRDFSMSGF--HAGHEHLRLPNVTDVSVTYAGETEPPPGAG---------FDPFEREVHGPIVI--------LDDRASKIRVASNNSMFE-DIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVERGDIPIV---LAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPPEG--WAALDMPRPWLDVRVPVVLMLREDA 3393
AVR C VDASN +SV+ + A + LL A P FD M+R+ S + SEF R A P T R+R+ S + E ++ +V P P+V R C + ++S+ ++ D GF V F +AS G + A GPG G R + R ++ K Y + V L P Y F V V YGE GP+S+ S+ A T AP + + + G +TL P D GGS + + R E+ W+ VG L + V + ++ E +Y+F V N +G +PWS P+ P AT+ E+ K + F H H H+ + T G+ + FD VHGP+V LD S N+ + W CH+SPR K +E+V A P DA S +N +R R+V+V+RG P+ L AQRAGALGV++AD+G+C + Q CV G+D G WA LD+ RPW V +PVVL+L + A
Sbjct: 175 AVRFCVVDASNVHSVRRLAKESPDVHFPHAKSLVISELLTALDDPEFDFVMARSYSEMPWSEFATWPRPAPEEKP------------------------VHQQTKRQRKNFGSWQSE-----QRWNWRVVSATIPELPP-PEVVHAGRERCELRLSSSYERRKHDDRPFGFEVQFEQVTPPDASL----------GEVAAWGPGDEKGTQRFDAASHRQEKHETV-FANHKSYIVDVKDTL-PARGYVFRVRVYYGEVEGPWSKPSEEASTPARGAPSKIVGSSVQALG-RGLTLTVPRPFDDGGSTIKGLVLRFRHHDSENFPGAWRHVGSFATKDWPLQLDVTN----ELLTSREDSSHNHSYEFSVAPYNRLGVAPWSGPTAP---CATNNEE-KAVSYGHGAFDRHTRH-HIPTDDELVQIATEEGKKLYEEASHYVRKHLDDLFDEHAHSVHGPLVSIGGSLTASLDVYDSLHNYRRPNARPDYSAQAWLCHWSPRGHKAVAELVAADPLDACSTHKNAAPLRGRVVLVKRGQCPLATKALLAQRAGALGVVIADNGKCT-ALDQYCVPGADRSRGEAWARLDLQRPWAGVHIPVVLVLADSA 729
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A8K1C2W5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2W5_PYTOL) HSP 1 Score: 152 bits (383), Expect = 1.070e-33 Identity = 169/602 (28.07%), Postives = 257/602 (42.69%), Query Frame = 1
Query: 1669 VRLCYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSA--SEFFEGGRKATSVNPSASPSTDADSSEAGLDADGDSSATAGDNTGRKRRRLSSTEEEVGNEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFNVSFVPAATTNASSNTAGHGSGGGGYMEASGPGVFVGDPRLKSEHARDRDLLSLGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGSPGTHAVT---LHFLPPPDHGGSPVSWYHVMSRPTGEHVLSKWQAVGMAPAPAPRLDVSVH---DTEPQSVVVKVE---HLVPGVAYQFRVCAQNDVGTSPWSAPSEPVVVLATDAEDAKHRDFSMSG-----FHAGHEHL--RLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPIVILDDRASKIRVASNNSMFEDIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVERGDIPIVLA---AQRAGALGVIVAD-DGRCGGSFGQLCVYGSDPP--EGWAALDMPRPWLDVRVPVVLMLREDAERL 3402
+R C+VDASN N+VK++L A V+ A L + +SP FD SM R P+ A +++ ++ + S + SE + +R RL +E+ + + + + PL P V RT+ + W + + D T G+ + + T+ ++ + G F +S A L +GK+ ++ L D++Y F + + GE G S+ S+ RT P V P + +A T L +L P D GG ++ Y V R + ++ + V ++ D QS V V +LVPG +Q RV A N +G PWSA S+P + D + + G + L +L N T VT A A D ++ P ++L D K VA DVW+ HFSPR F+V SE+ A P DA S L N V++R+V++ RG++P V AQ AGALGVI+ D +G C F Q CV G+D EG+ D W +R+P VL L+E + RL
Sbjct: 351 LRFCFVDASNVNAVKAELTTEALVDPEARSFLLSMQSPTFDASMFRRPTISDAIWNKYITWPKEVKILKRSDVLNGGDFGSEPAVVLS-------------RRERLKLWQED------KRWDRHIETLTLPVPLPPIVLDTGRTSVILCWQDLYKTPKNDITVFGYEIRWRREETSEDEASE----------LPVEGAVNFTSKQLKRS--AMPTTLFGDEF-DGKQIEGTIE-GLEADSVYSFDLRIWVGEAIGMESDRSRSIRTKPCAVPDAVRGVPYATSTENAATCLKLRWLEPSDDGGRRINAYLVALRELKDPSTDVLESEDPSRTDETEQLVVINATSDVSRQSDVWSVSSVCNLVPGTTFQVRVAAVNIIGVGPWSARSDPATLSPYDKSSRLNEIPVLYGIGDPRYSRASRFLTQQLNNATLALVTEAQR------ASTDTYQGV--RPRIVLSDIQEKAIVAVGADTELQFDVWSGHFSPRKFQVSSEIARADPFDASSPLVNAADVKDRVVIIARGNVPFVFKVYHAQLAGALGVIIGDFNGTCHNRFDQRCVPGADRTRGEGFGLHDRHVLWQRIRIPFVLALKEASTRL 911
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Match: A0A836CBI4_9STRA (PA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI4_9STRA) HSP 1 Score: 136 bits (343), Expect = 7.120e-33 Identity = 84/198 (42.42%), Postives = 106/198 (53.54%), Query Frame = 1
Query: 2854 MSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPIVILDDRASKIRVASNNSMFE------DIDVWTCHFSPRSFKVKSEVVVAQPADARS-ELENGRFVRNRIVVVERGDIPIV---LAAQRAGALGVIVADDGRC--GGSFGQLCVYGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERLTAA 3411
+ G H LP D +V YA P ER GP V LD ++ VA + D+ VW HFSPR+ V +E++ A P DA + EL N FVR RI +V RG +P+V +AAQRA AL V++ADDG C G F Q C+ GS PP+GWA D PW +VR+P VLML+E A L AA
Sbjct: 1 VQGIHGNAPLQPLPTPRDPAVRYADFGGAPIVGLHAHAERMARGPTVTLDAARERVHVADDRGPLAIALGGADVPVWAGHFSPRTHLVTAELIPADPPDAAAPELRNASFVRGRIALVTRGAVPLVHKVMAAQRARALAVVIADDGSCTHAGGFSQFCMPGSSPPDGWAREDSEGPWREVRIPHVLMLKEHAAVLLAA 198 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1345.2063.1 >prot_E-siliculosus-1a_F_contig1345.2063.1 ID=prot_E-siliculosus-1a_F_contig1345.2063.1|Name=mRNA_E-siliculosus-1a_F_contig1345.2063.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1187bp MRRTRGQKPHCGGFLSGATTGRGTASVVPWMTMLFLVHSHFALAAHTVFLback to top mRNA from alignment at E-siliculosus-1a_F_contig1345:22066..32100+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1345.2063.1 ID=mRNA_E-siliculosus-1a_F_contig1345.2063.1|Name=mRNA_E-siliculosus-1a_F_contig1345.2063.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10035bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1345:22066..32100+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1345:22066..32100+ >mRNA_E-siliculosus-1a_F_contig1345.2063.1 ID=mRNA_E-siliculosus-1a_F_contig1345.2063.1|Name=mRNA_E-siliculosus-1a_F_contig1345.2063.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=7122bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1345:22066..32100+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |