mRNA_E-siliculosus-1a_F_contig10221.206.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10221.206.1 vs. uniprot
Match: D7G3U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U5_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.750e-16 Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 1 MGMSPTAFRRLVSIQESSSSDASIDMGSFTWTILSASKFIEFVLEDGSGDE-TQALMLEHIAR 186
M MS TAF+RLVSIQESS SDASID+GSFTW +LS + F +VLED G+E TQALMLEHIAR
Sbjct: 2 MRMSSTAFQRLVSIQESSPSDASIDVGSFTWLMLSDTAFTPWVLEDAPGNEQTQALMLEHIAR 64 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10221.206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10221.206.1 >prot_E-siliculosus-1a_F_contig10221.206.1 ID=prot_E-siliculosus-1a_F_contig10221.206.1|Name=mRNA_E-siliculosus-1a_F_contig10221.206.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=62bp MGMSPTAFRRLVSIQESSSSDASIDMGSFTWTILSASKFIEFVLEDGSGDback to top mRNA from alignment at E-siliculosus-1a_F_contig10221:1586..1771+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10221.206.1 ID=mRNA_E-siliculosus-1a_F_contig10221.206.1|Name=mRNA_E-siliculosus-1a_F_contig10221.206.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=186bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10221:1586..1771+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10221:1586..1771+ >mRNA_E-siliculosus-1a_F_contig10221.206.1 ID=mRNA_E-siliculosus-1a_F_contig10221.206.1|Name=mRNA_E-siliculosus-1a_F_contig10221.206.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=372bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10221:1586..1771+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |