prot_E-siliculosus-1a_F_contig1344.2059.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1344.2059.1
Unique Nameprot_E-siliculosus-1a_F_contig1344.2059.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length205
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A6H5L4C1_9PHAE (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C1_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 2.520e-91
Identity = 172/204 (84.31%), Postives = 174/204 (85.29%), Query Frame = 0
Query:    1 MPPPSDGMDAERERMGGRRRDXXXXXXXXXXXXXXXXXXPKRKQTPVAQTARSPTPTNTTAGAAATAASGDCPEKRRNGAEDGPNIDYRQSTATGGCLPSSRNNPAQTQDPANATTGDAERPEDKETKAARARAMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDHKTLSRDPVGE 204
            MPPPSDGMDAERERMGGRRRD   XXXXXXXXXXXXXX   RKQTPVAQTARSPT               DCPEKRRNGAEDG N DYRQSTATGG LPSSRNN AQ QDP+NATT  AERP D ETKAARARAMVPMRPEEYAAQ+RTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDHKTLSRDPVGE
Sbjct:    1 MPPPSDGMDAERERMGGRRRDKESXXXXXXXXXXXXXX---RKQTPVAQTARSPTXXXXXXXXXXXXXXCDCPEKRRNGAEDGLNTDYRQSTATGGFLPSSRNNAAQAQDPSNATTITAERPADMETKAARARAMVPMRPEEYAAQKRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDHKTLSRDPVGE 201          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A1Z5KSI4_FISSO (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSI4_FISSO)

HSP 1 Score: 73.6 bits (179), Expect = 8.400e-13
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
Query:  132 ARAMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDHKTLSRD 200
            AR M PM  EEY AQQ T+R+V+DE TGR+RLV+GTGEIIE +VSR + + I R A+R   D  + SRD
Sbjct:  109 ARRMAPMSREEYQAQQSTIREVYDEQTGRYRLVRGTGEIIESLVSRSQHENINRQATRG--DGASFSRD 175          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A7S3LBW5_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBW5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.280e-10
Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 0
Query:  137 PMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHAS 188
            PM  EEY A + TVR+V+DE +GR+RLV+GTGEIIERIVSRQ+ + I R A+
Sbjct:   39 PMTREEYEALRNTVREVYDEQSGRYRLVRGTGEIIERIVSRQDHESINRQAT 90          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A1B6GJQ9_9HEMI (ADP-ribosylation factor-like protein 6-interacting protein 4 n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6GJQ9_9HEMI)

HSP 1 Score: 67.0 bits (162), Expect = 2.450e-10
Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 0
Query:  131 RARAMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASR 189
            +A++M PM  EE+  QQ T+R+V+DE+TGR RL++G GEIIE IVSR+  +EI R A+R
Sbjct:  112 KAQSMAPMSKEEWEKQQNTIRRVYDEETGRTRLIRGEGEIIEEIVSRERHKEINRQATR 170          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A7S4J1R6_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1R6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.760e-10
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0
Query:  128 KAARARAMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHAS 188
            KAA +R+MVPM  EEY AQ+  +R+V+D DTGR RLV+G GEIIERIVSR++   I R A+
Sbjct:  264 KAAASRSMVPMSREEYEAQRSVIREVYDPDTGRMRLVRGDGEIIERIVSREDHARINRLAT 324          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A7S3Y5I9_HETAK (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5I9_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 6.120e-10
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:  134 AMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEI 183
            AMVPMR EEY AQQ  VR++ D +TGR RLVKG+GEIIERIVS++E   I
Sbjct:  106 AMVPMRREEYEAQQSVVREILDLETGRMRLVKGSGEIIERIVSKEEHARI 155          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A0L7LR19_9NEOP (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7LR19_9NEOP)

HSP 1 Score: 65.1 bits (157), Expect = 6.500e-10
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
Query:  126 ETKAARARAMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHAS 188
            ET   ++RAM PM  EE+  +Q  VR+V DEDTGR+RL+KG GE++E IVSR   +EI R A+
Sbjct:   70 ETLMEKSRAMAPMTKEEWEKRQSVVRRVLDEDTGRYRLIKGDGEVLEEIVSRDRHKEINRKAN 132          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: A0A7S2XU08_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU08_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.880e-10
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  117 GDAERPEDKETKAARARAMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDHKTLSRD 200
            G  E   + ++K  R  AMVPM  E+Y AQQ  VR+V+D ++GR+RLV+G+GEIIERIVSR    +I R A+R   D    SRD
Sbjct:  227 GKEEEANNTKSKKERVAAMVPMTREQYEAQQAVVREVYDAESGRFRLVRGSGEIIERIVSRDAHAQINRVATRT--DGTRFSRD 308          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: T1GW67_MEGSC (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1GW67_MEGSC)

HSP 1 Score: 64.3 bits (155), Expect = 1.310e-9
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0
Query:  137 PMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDH---KTLSRD 200
            P +PEEYAA+Q  +R+V DE+TGR RL+KG GE++E IVS+Q  QEI + A++   ++   KT  R+
Sbjct:   85 PEKPEEYAARQSKIRRVKDEETGRMRLIKGDGEVLEEIVSKQRHQEINKQATKGDGEYFKSKTTGRE 151          
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Match: UPI000771B77F (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B77F)

HSP 1 Score: 66.6 bits (161), Expect = 2.020e-9
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 0
Query:  131 RARAMVPMRPEEYAAQQRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASR 189
            RARAM PM  EE+  +Q  VR+V+DE+TGR RL+KG GE++E IVSR   +EI R A+R
Sbjct:  323 RARAMAPMTKEEWEKRQSVVRRVYDEETGRHRLIKGDGEVLEEIVSRDRHKEINRQATR 381          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1344.2059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4C1_9PHAE2.520e-9184.31ADP-ribosylation factor-like protein 6-interacting... [more]
A0A1Z5KSI4_FISSO8.400e-1357.97ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S3LBW5_9STRA1.280e-1063.46ADP-ribosylation factor-like protein 6-interacting... [more]
A0A1B6GJQ9_9HEMI2.450e-1055.93ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S4J1R6_9STRA2.760e-1060.66ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S3Y5I9_HETAK6.120e-1068.00ADP-ribosylation factor-like protein 6-interacting... [more]
A0A0L7LR19_9NEOP6.500e-1053.97ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S2XU08_9STRA8.880e-1050.00ADP-ribosylation factor-like protein 6-interacting... [more]
T1GW67_MEGSC1.310e-949.25ADP-ribosylation factor-like protein 6-interacting... [more]
UPI000771B77F2.020e-957.63ADP-ribosylation factor-like protein 6-interacting... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019532Nuclear RNA-splicing-associated protein, SR-25PFAMPF10500SR-25coord: 128..189
e-value: 1.4E-15
score: 57.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1344contigE-siliculosus-1a_F_contig1344:27117..29104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1344.2059.1mRNA_E-siliculosus-1a_F_contig1344.2059.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1344 26970..29979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1344.2059.1 ID=prot_E-siliculosus-1a_F_contig1344.2059.1|Name=mRNA_E-siliculosus-1a_F_contig1344.2059.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=205bp
MPPPSDGMDAERERMGGRRRDKKSSKKKRKKKGEKKDKKPKRKQTPVAQT
ARSPTPTNTTAGAAATAASGDCPEKRRNGAEDGPNIDYRQSTATGGCLPS
SRNNPAQTQDPANATTGDAERPEDKETKAARARAMVPMRPEEYAAQQRTV
RQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDHKTLSRD
PVGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019532Nucl_RNA-splicing_assoc_SR-25