mRNA_E-siliculosus-1a_F_contig1333.2016.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1333.2016.1
Unique NamemRNA_E-siliculosus-1a_F_contig1333.2016.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5KBL4_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL4_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 4.560e-147
Identity = 225/275 (81.82%), Postives = 237/275 (86.18%), Query Frame = 2
Query:   44 RQLPHWKTVTFREKIDKVVADTSKKMEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 868
            R +   +T+TFREKIDKV ADTSKKMEEGSTG++AL FL SALGRVVSSSSPEKLVYDLQTFA PTGTP +      +G        G+VTPQDNTIQLAVRESVSDQYSVLTASVFKGKE GVVPFDN DTLM ELRNF+ VKGGATTPTR MAQVK SSG RQGQR  GGG TGSGGTN FRSASPGRSDGGYGGR VMTVEDM+YEDECAEFKRVYDIHA+PRTNSQA DCPFF WFTSVEEKDRHR+AFG RCLNCGSEGHFVRDCDKGYI
Sbjct:  234 RSMSPAQTMTFREKIDKVFADTSKKMEEGSTGKKALAFLTSALGRVVSSSSPEKLVYDLQTFAAPTGTPYSEYLTILQGLVQNVRNLGVVTPQDNTIQLAVRESVSDQYSVLTASVFKGKEKGVVPFDNIDTLMHELRNFEAVKGGATTPTRMMAQVKSSSGWRQGQRGCGGGRTGSGGTNTFRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRQAFGLRCLNCGSEGHFVRDCDKGYI 507          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5KRF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF6_9PHAE)

HSP 1 Score: 418 bits (1075), Expect = 2.450e-144
Identity = 221/273 (80.95%), Postives = 233/273 (85.35%), Query Frame = 2
Query:   65 TVTFREKIDKVVADTSKKMEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNA-----FRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 868
            T+TFREKIDKV ADTSKKM+EGSTG++ALTFL SAL RVVSSSSPEKLVYDLQT AVPTGTP +      +G        G+VTPQDNTIQLAVRESVSDQYSVLTAS+FKGKEL VV FDN DTLM ELRNF+ VKGGATTPTRRMAQVK SSG RQGQR  GGG TGSGGTN       RSASPGRSDGGYGGR VMTVEDM+YEDECAEF+RVYDIHA+PRTNSQA DCPFF WFTSVEEKDRHRRAFG RCLNCGSEGHFVRDCDKGYI
Sbjct:   37 TITFREKIDKVFADTSKKMDEGSTGKKALTFLTSALWRVVSSSSPEKLVYDLQTCAVPTGTPYSEYLTTLQGLVHNVRNLGVVTPQDNTIQLAVRESVSDQYSVLTASMFKGKELCVVAFDNIDTLMHELRNFEAVKGGATTPTRRMAQVKSSSGWRQGQRGGGGGRTGSGGTNTRVMTGXRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFQRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLRCLNCGSEGHFVRDCDKGYI 308          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: D7G674_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G674_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 9.720e-143
Identity = 207/250 (82.80%), Postives = 219/250 (87.60%), Query Frame = 2
Query:  119 MEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 868
            M  GSTGR+ALTFL SALGRVVSSSSPEKLVYDLQTF VPTGTP +       G        GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGK+LG+VPFDN DTLMQELRNF+ VKGGATTPTRR AQVKGSSGGRQGQ+R+GGGGTGSGGTN FRSASPGR DGGYGGRRVMTV++++ EDECAEF+RVYDIH SPRTNSQ  DCPFF WFTSVEEKDRHRRAFGSRCL CGSEGHFVRDCDKGYI
Sbjct:    1 MARGSTGREALTFLTSALGRVVSSSSPEKLVYDLQTFTVPTGTPYSEYLTTLHGLVHNVRNLGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKQLGLVPFDNIDTLMQELRNFEAVKGGATTPTRRSAQVKGSSGGRQGQKRDGGGGTGSGGTNTFRSASPGRLDGGYGGRRVMTVDEVDCEDECAEFQRVYDIHVSPRTNSQMKDCPFFAWFTSVEEKDRHRRAFGSRCLKCGSEGHFVRDCDKGYI 250          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 3.650e-130
Identity = 202/268 (75.37%), Postives = 214/268 (79.85%), Query Frame = 2
Query:   65 TVTFREKIDKVVADTSKKMEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 868
            T+TFREKI KV +DTSKK+EEGSTGR+AL FL SALGRVV+SSSPEK+VYDLQTFAVPTGTP        +G         +VTPQDNTIQLAVRE VSDQYSVLTASV KGKELGVV FDN                    PTRRMAQVKGSSGGRQGQR +GGG TGSGG N FRSASPGRSDGGYGGRRVMTVEDM+YED+C EFKRVY IH+SPRTNSQ NDCPFF WFTSVEEKDRHRRAFGSRCLNCGSEG FVRDC KGYI
Sbjct:    6 TITFREKIGKVFSDTSKKIEEGSTGRKALAFLTSALGRVVNSSSPEKVVYDLQTFAVPTGTPYREYLTTLQGLGHNVRNLALVTPQDNTIQLAVREIVSDQYSVLTASVCKGKELGVVQFDNX-------------------PTRRMAQVKGSSGGRQGQRCDGGGRTGSGGGNTFRSASPGRSDGGYGGRRVMTVEDMDYEDKCEEFKRVYGIHSSPRTNSQVNDCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGQFVRDCVKGYI 254          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K255_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K255_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 5.870e-85
Identity = 158/246 (64.23%), Postives = 167/246 (67.89%), Query Frame = 2
Query:  131 STGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 868
            +TG++AL FL SALGRVVSSSSPEKLVYDLQTFAVPTGTP +      +G         IVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELG              RNF  VKGG                                    FRSASPGRSDGGYGGR VMTVEDM+YEDECAEFKRVYDIHA+PRTNSQA DCPFF WFTSVEEKDRHRRAFG  CLNCGSEGHFVR   +G +
Sbjct:  457 ATGKKALAFLTSALGRVVSSSSPEKLVYDLQTFAVPTGTPYSEYLTTLQGLVHNVRNLAIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELG--------------RNFKAVKGGGKDSDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLTCLNCGSEGHFVRIVIRGTL 687          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K8R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R6_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 1.160e-71
Identity = 128/170 (75.29%), Postives = 140/170 (82.35%), Query Frame = 2
Query:   65 TVTFREKIDKVVADTSKKMEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGS 574
            T+TFREKIDK+ +DTSKKMEE STGR+AL FL SALGRVVSSS PEKLVYDLQT AVPTGTP        +G        GIVTPQDNTIQLAV ESVSDQ SVLTA VF+GKELGVV FD+ DTLM E+R+F+ V+GGATTPTRRMAQVKGSSGGRQGQRR+GGG TGS
Sbjct:  152 TMTFREKIDKIFSDTSKKMEERSTGRKALAFLTSALGRVVSSSLPEKLVYDLQTLAVPTGTPYGEYLTTLQGLVHSVRNLGIVTPQDNTIQLAVGESVSDQDSVLTACVFRGKELGVVTFDHIDTLMHEVRSFEAVEGGATTPTRRMAQVKGSSGGRQGQRRDGGGRTGS 321          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K1N6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N6_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 7.360e-37
Identity = 103/281 (36.65%), Postives = 151/281 (53.74%), Query Frame = 2
Query:   47 QLPHWKTVTFREKIDKVVADTSKKMEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSA-SPGRSDGGYG-----GRRVMTVEDMEYEDECAEFKRVYDIHAS-PRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 868
            +LP+ + +  + KI    + T ++++ G  GR+AL FL+  L R +S ++P+ +V+ LQ   V  GTP +      R       + G  + QDN +QLAVR+SV DQYS +   VFKG++L  VP+D+   LM  L         AT   R +  V+     R GQ    GGG  S GT ++ SA S GR    YG     G RVM + + E EDE  EFK+V+ +     +     +  PF+T F S +E+D  R+A+G +CLNCG + HFVR+C   +I
Sbjct:  531 RLPNAQGLDLKAKITSSFSQTRQQLDNGMAGREALNFLVRVLTRTLSMATPQHVVFALQNLEVDAGTPFSEYMNTLRALVQNAMSVGHESAQDNVLQLAVRDSVCDQYSNIAVDVFKGRDLMAVPYDSIRDLMDALEVLAWNTTEATAVKRNVISVQTK---RAGQ----GGGNASAGTTSYASAASAGRM---YGKQPSQGARVMNIHE-EMEDEEKEFKKVHYVATQWEKGKGDESYIPFYTRFDSRKEQDEARQAYGLKCLNCGDQSHFVRECTHPFI 800          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5JYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ6_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.370e-28
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 2
Query:  119 MEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELG 412
            MEEGSTG++AL FL SALG+VVSSSSPEKLVYDLQ FAVPTGTP +      +G        GIVTPQDNTIQLAVRESVSDQ+        +G+ +G
Sbjct:    1 MEEGSTGKKALAFLTSALGKVVSSSSPEKLVYDLQRFAVPTGTPNSEYLTTLQGLVHNVRNLGIVTPQDNTIQLAVRESVSDQHKCFDRFRVQGQGVG 98          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.280e-25
Identity = 93/282 (32.98%), Postives = 140/282 (49.65%), Query Frame = 2
Query:   56 HWKTVTFREKIDKVVADTSKKMEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTPQAST*LPCRGWCTMFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPT-------------RRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRT-NSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEG--HFVRDC 853
            H K+   ++ +   V  + + M+ G +G  AL  L+ A+   +S+ +P  ++  LQ FAVP GT   +     +         G    +D T+Q+AV+  V+DQY+ LTA VF G+    +P+D+ ++LM+ L   D +    TT T             R  A +  SS GR G     GGG+ SG  +   S +P    G  G R VMTV   +Y+DE  EF +V  +    +      +D PF+  FT+ +E+DR RR FG +CLNCG E   H  R+C
Sbjct:   69 HAKSAATKQILVAAVNQSVRAMDSGMSGPDALQLLLRAVCSGLSTVTPALVLQQLQNFAVPAGTTFKAYLEDLKVLVESVQMVGFA--EDGTLQVAVKAGVTDQYATLTAPVFHGRNTQALPYDSLESLMEAL---DDMTDNTTTATASVRLRGVGSVLPRGQADMSVSSRGRYG-----GGGSFSGAKSG--SLTP---QGSAGARAVMTV--AQYDDESREFWQVSQVSRGNKGFGRNDDDPPFYVQFTNNKERDRARREFGPKCLNCGVEEPFHLAREC 333          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K9S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S7_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.190e-17
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 2
Query:  119 MEEGSTGRQALTFLISALGRVVSSSSPEKLVYDLQTFAVPTGTP 250
            MEEGSTGR+ALTFL SALGRVVSSSSPEKLVYDLQTFAVPTGTP
Sbjct:    1 MEEGSTGRKALTFLTSALGRVVSSSSPEKLVYDLQTFAVPTGTP 44          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KBL4_9PHAE4.560e-14781.82CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KRF6_9PHAE2.450e-14480.95CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G674_ECTSI9.720e-14382.80CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0Q4_9PHAE3.650e-13075.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K255_9PHAE5.870e-8564.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8R6_9PHAE1.160e-7175.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N6_9PHAE7.360e-3736.65CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYQ6_9PHAE1.370e-2863.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNG1_9PHAE3.280e-2532.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9S7_9PHAE1.190e-1795.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1333contigE-siliculosus-1a_F_contig1333:30375..31857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size579
Model size868
Exons2
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1333.2016.1prot_E-siliculosus-1a_F_contig1333.2016.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1333 30375..30953 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927853.4575567-CDS-E-siliculosus-1a_F_contig1333:30374..309531622927853.4575567-CDS-E-siliculosus-1a_F_contig1333:30374..30953Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1333 30375..30953 -
1696318708.9781744-CDS-E-siliculosus-1a_F_contig1333:30374..309531696318708.9781744-CDS-E-siliculosus-1a_F_contig1333:30374..30953Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1333 30375..30953 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927853.4706674-UTR-E-siliculosus-1a_F_contig1333:30953..311781622927853.4706674-UTR-E-siliculosus-1a_F_contig1333:30953..31178Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1333 30954..31178 -
1696318708.9864085-UTR-E-siliculosus-1a_F_contig1333:30953..311781696318708.9864085-UTR-E-siliculosus-1a_F_contig1333:30953..31178Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1333 30954..31178 -
1622927853.4832518-UTR-E-siliculosus-1a_F_contig1333:31793..318571622927853.4832518-UTR-E-siliculosus-1a_F_contig1333:31793..31857Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1333 31794..31857 -
1696318708.9950988-UTR-E-siliculosus-1a_F_contig1333:31793..318571696318708.9950988-UTR-E-siliculosus-1a_F_contig1333:31793..31857Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1333 31794..31857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1333.2016.1

>prot_E-siliculosus-1a_F_contig1333.2016.1 ID=prot_E-siliculosus-1a_F_contig1333.2016.1|Name=mRNA_E-siliculosus-1a_F_contig1333.2016.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=193bp
MFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDT
LMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNA
FRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQAN
DCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI
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mRNA from alignment at E-siliculosus-1a_F_contig1333:30375..31857-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1333.2016.1 ID=mRNA_E-siliculosus-1a_F_contig1333.2016.1|Name=mRNA_E-siliculosus-1a_F_contig1333.2016.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1483bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1333:30375..31857- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACGAGGGCTCTCAAGGGGGCAAGGTCTACTGCGACCAGCAAGGCAAC TTCCACACTGGAAGGTGGGTGGGAGGAGACAGGGGGGGTAACGTGTCTGT CAAAGAGGAAGTGAAGGGGGAGGAGGTGTTAAGGGAAGAAAAGATTACAC CTGCCGATGACAAGCTCAAAACAGAGTTCCAGGAAGAGTTGTCGAACAAG GAGAAGGAAATCGAAACTCTGAAGCAGAAGTTGGCTGAAATGGGAGGTCA GTTCAAACTGCTGAGCCTCCAGGACACGGACGCAAAACCTCAAGCATGTG CAACTGAATCTAGTGTGTTTGCAAGGGGGTTGGCAACGGTCAAAGAAGAG CAGGAAGATGTCGTGTCACAGTCAGCGCCGGTAACGACGGTTAAGGAAGG ACCGGAGATTGTCACGATTCAGCCGTTGACCTCGAGGAGAAACAAAAGAT CATGACGGGTTACGTGACGATGAACATGAAGGATTGGAATGAGCTCCCTT GGATACCACTCTCTGATTCGCCGGGAGAGTTGGTTTCTTTCAACAGAAGG TTGGAGACTACGGTCAACGATGTCTTTTTGGCAGTGGGAGACTACAGTGG TTGGTGGGTGCCGGGATGGGAAAAACCTGTGCACGGACATCTGATCACTT CCATCACCCGTTCCATGTCCTCTGCCCAGACGGTGACGTTCCGCGAGAAG ATAGACAAGGTCGTTGCGGATACGTCGAAGAAGATGGAAGAAGGGTCGAC GGGTAGGCAGGCGTTGACATTCTTGATTTCGGCTTTGGGGAGGGTGGTGA GTTCATCCTCGCCCGAGAAGTTGGTGTATGACTTGCAGACGTTTGCAGTA CCGACTGGAACGCCGCAAGCGAGTACTTGACTACCTTGCAGGGGTTGGTG CACAATGTTCGGAACTTGGGGAATTGTGACGCCGCAGGATAACACAATTC AACTGGCAGTCAGAGAGAGTGTGTCCGATCAATACAGTGTTCTGACCGCT TCTGTGTTTAAGGGCAAGGAGTTGGGAGTGGTGCCGTTCGATAACACCGA CACCTTGATGCAGGAATTGCGAAATTTCGACGTGGTGAAGGGGGGGGCAA CGACGCCAACGAGGAGGATGGCACAGGTGAAGGGTTCCTCTGGGGGGAGG CAGGGTCAGAGAAGGGAGGGAGGAGGAGGGACAGGGTCAGGGGGAACGAA TGCCTTTCGGTCCGCGTCACCTGGCCGGTCGGATGGTGGATATGGGGGGA GGAGAGTGATGACGGTGGAGGACATGGAGTACGAGGACGAATGTGCAGAG TTTAAGAGAGTCTACGACATTCACGCGTCGCCTCGCACTAACAGCCAAGC GAATGACTGCCCTTTCTTCACGTGGTTTACGTCTGTCGAGGAAAAGGACA GGCACAGACGGGCGTTCGGGTCAAGGTGTTTGAACTGTGGTAGTGAGGGA CACTTTGTGCGGGATTGTGACAAGGGTTACATT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1333:30375..31857-

>mRNA_E-siliculosus-1a_F_contig1333.2016.1 ID=mRNA_E-siliculosus-1a_F_contig1333.2016.1|Name=mRNA_E-siliculosus-1a_F_contig1333.2016.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1158bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1333:30375..31857- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTCGGAACTTGGGGAATTGTGACGCCGCAGGATAACACAATTCAACT
GGCAGTCAGAGAGAGTGTGTCCGATCAATACAGTGTTCTGACCGCTTCTG
TGTTTAAGGGCAAGGAGTTGGGAGTGGTGCCGTTCGATAACACCGACACC
TTGATGCAGGAATTGCGAAATTTCGACGTGGTGAAGGGGGGGGCAACGAC
GCCAACGAGGAGGATGGCACAGGTGAAGGGTTCCTCTGGGGGGAGGCAGG
GTCAGAGAAGGGAGGGAGGAGGAGGGACAGGGTCAGGGGGAACGAATGCC
TTTCGGTCCGCGTCACCTGGCCGGTCGGATGGTGGATATGGGGGGAGGAG
AGTGATGACGGTGGAGGACATGGAGTACGAGGACGAATGTGCAGAGTTTA
AGAGAGTCTACGACATTCACGCGTCGCCTCGCACTAACAGCCAAGCGAAT
GACTGCCCTTTCTTCACGTGGTTTACGTCTGTCGAGGAAAAGGACAGGCA
CAGACGGGCGTTCGGGTCAAGGTGTTTGAACTGTGGTAGTGAGGGACACT
TTGTGCGGGATTGTGACAAGGGTTACATTATGTTCGGAACTTGGGGAATT
GTGACGCCGCAGGATAACACAATTCAACTGGCAGTCAGAGAGAGTGTGTC
CGATCAATACAGTGTTCTGACCGCTTCTGTGTTTAAGGGCAAGGAGTTGG
GAGTGGTGCCGTTCGATAACACCGACACCTTGATGCAGGAATTGCGAAAT
TTCGACGTGGTGAAGGGGGGGGCAACGACGCCAACGAGGAGGATGGCACA
GGTGAAGGGTTCCTCTGGGGGGAGGCAGGGTCAGAGAAGGGAGGGAGGAG
GAGGGACAGGGTCAGGGGGAACGAATGCCTTTCGGTCCGCGTCACCTGGC
CGGTCGGATGGTGGATATGGGGGGAGGAGAGTGATGACGGTGGAGGACAT
GGAGTACGAGGACGAATGTGCAGAGTTTAAGAGAGTCTACGACATTCACG
CGTCGCCTCGCACTAACAGCCAAGCGAATGACTGCCCTTTCTTCACGTGG
TTTACGTCTGTCGAGGAAAAGGACAGGCACAGACGGGCGTTCGGGTCAAG
GTGTTTGAACTGTGGTAGTGAGGGACACTTTGTGCGGGATTGTGACAAGG
GTTACATT
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