prot_E-siliculosus-1a_F_contig13329.2014.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13329.2014.1
Unique Nameprot_E-siliculosus-1a_F_contig13329.2014.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length73
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13329.2014.1 vs. uniprot
Match: D8LJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG9_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 5.220e-44
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    1 MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGT 73
            MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGT
Sbjct:    1 MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGT 73          
BLAST of mRNA_E-siliculosus-1a_F_contig13329.2014.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.530e-11
Identity = 36/68 (52.94%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    5 AQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILG 72
            A  AKADG+P  F + S+DAA     ++PA+   THG DRG+ ERQKI AV  EG  V V F PQ LG
Sbjct:  117 AMRAKADGKPLNFVFMSIDAANSTSHALPAIYPPTHGGDRGYSERQKIMAVHIEGQFVEVYFTPQYLG 184          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13329.2014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJG9_ECTSI5.220e-44100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUU1_9PHAE1.530e-1152.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13329contigE-siliculosus-1a_F_contig13329:528..1052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13329.2014.1mRNA_E-siliculosus-1a_F_contig13329.2014.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13329 528..1052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13329.2014.1 ID=prot_E-siliculosus-1a_F_contig13329.2014.1|Name=mRNA_E-siliculosus-1a_F_contig13329.2014.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=73bp
MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQ
KIYAVLTEGHSVSVSFVPQILGT
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