mRNA_E-siliculosus-1a_F_contig1021.199.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A6H5KEN7_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN7_9PHAE) HSP 1 Score: 479 bits (1232), Expect = 2.730e-165 Identity = 238/244 (97.54%), Postives = 243/244 (99.59%), Query Frame = 2 Query: 368 MSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSREGSRTHPRL 1099
MSKDAWYP+LDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLR+SSPS+LTEESVL YLKAI+SECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGS+EGSRTHPRL
Sbjct: 1 MSKDAWYPVLDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRSSSPSHLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSQEGSRTHPRL 244
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: D8LB99_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB99_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 2.960e-152 Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 2 Query: 128 MSASHTRSADVVAGKSFVTSSNGSNIFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVR 799
MSA+HTRSADVVAGKSFVT SNGSNIFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVR
Sbjct: 1 MSAAHTRSADVVAGKSFVTCSNGSNIFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVR 224
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A835Z7B1_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B1_9STRA) HSP 1 Score: 218 bits (554), Expect = 6.480e-62 Identity = 138/337 (40.95%), Postives = 185/337 (54.90%), Query Frame = 2 Query: 134 ASHTRSADVVAGKSFVTSSNGSNIFTKVWGQPS----SDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKV-------------------YKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKP-------GEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGVAEFVARKEACGERLRDLV-LPGSHHLHLDDETAPLVASHTAAFL 1051
AS T +A +SF S G I KVWG + S ++ LALHGYLDN+ +FDLLGPALA EG+EVVAID PGHG S H S D WY I+DYP + +LGW+ +GHS+G +ASLVA + P+ V CVF+D LGPF + LR ++ SR AL++K+ KV + S + AV+ R+ A + QT+S A L+ + +P G+ G V+F D+RLR S +YL+E++V +L I CL++ G+TG + F AR + G RL D LPGSHHLHLD E+ V T FL
Sbjct: 8 ASTTSAAAAATERSFQLPS-GQVIAAKVWGHAAQGQDSRKRILALHGYLDNANTFDLLGPALAGEGYEVVAIDLPGHGLSSHTSSDNWYDIMDYPHSIAAVQDALGWDSCHYLGHSLGAGIASLVAGALPDRVTGCVFIDALGPFTLAPHGAHMHLRRAMQSRAALLNKQQKVXXXXXXXXXXXXXXXXXXXWPSLELAVQARVAAAADYPGSQTISKEAAAILMQRSIEPVSPEHNNGKAGG-VRFRYDLRLRAYSSTYLSEDTVSAFLSNIACPCLLVTGQTGFPLSGG----FRARMQTLGPRLADHAHLPGSHHLHLDPESWQGVRDVTLKFL 338
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A7S4RJ08_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RJ08_9DINO) HSP 1 Score: 191 bits (484), Expect = 3.970e-51 Identity = 117/297 (39.39%), Postives = 174/297 (58.59%), Query Frame = 2 Query: 191 NGSNIFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWE-KFSMVGHSMGGAVASLVAAS-FPE---MVERCVFLDILGPFASRTGTSPKLLRASVASR----RALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGET-GMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFL 1051
+G + + WG+ R LALHG+LDN+ +F LLGP LA+ GF VA+D+PGHGRS H S+D Y + D P Y +AAR+LGWE +++VGHS+G + A+++AAS +P + C +D+LGP + + + L ++ +R L+ + +VY SFDE V+ RL+AV Q ++ A LV A + G F +D R++ SPSY TE+ VL L+AI++ L++ + G A ++ R+ A LR VLPG HHLHLD +TAP V++ +AFL
Sbjct: 105 DGMQLAARAWGERG--RPVLALHGWLDNANTFSLLGPHLARRGFLAVAVDWPGHGRSAHRSRDTSYGLSDLPWYAHQAARALGWEGAYALVGHSLGASAATILAASAYPSSGTLAALCC-IDVLGPLSKTSSNTAVHLELALRARDKHLERLLRRSRRVYASFDECVQARLRAVRALPGDQLLTPEAAASLVERAVEEMHRGAWT-FRHDPRVQAPSPSYYTEDQVLALLRAIRTPTLLVEADPEGGHAWPRPAEQWEVRRGAVAG-LRRAVLPGGHHLHLDPDTAPAVSTAVSAFL 396
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A7U7G8P2_9GAMM (Putative hydrolase n=1 Tax=Candidatus Contendobacter odensis Run_B_J11 TaxID=1400861 RepID=A0A7U7G8P2_9GAMM) HSP 1 Score: 173 bits (438), Expect = 5.540e-46 Identity = 109/288 (37.85%), Postives = 148/288 (51.39%), Query Frame = 2 Query: 203 IFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKP-GEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET------APLVASHTAA 1045
+ + WG P LALHG+LDN+ SFD L P L +VA+D PGHG+S+ Y +D+ V+ AA LGWE F+++GHS+GG +AS VAA PE V R ++ LGP S P LR ++ L DK P VY S D A++ R +A +SW A LV+ +P GEG + D RLR +SP YL E +L Y++ I + L+I G G L + E AR L +LPG HH HL+D AP A+ +A+
Sbjct: 14 LAARAWGPPKGI-PVLALHGWLDNAASFDALAPLLPD--IRLVALDLPGHGQSEQRPPGMHYHFVDFIPDVVAAADVLGWEYFALLGHSLGGGIASFVAAILPERVTRVAMIEGLGPPTSHPADGPIHLRKTIEQMNGLPDKRPPVYPSMDAAIQARCEA-------SDLSWRAAATLVSRGVQPIGEG---YGWRTDPRLRFASPLYLNEPQILAYMERIAAPALLICGADGYLVKRAYMQERYARIA----NLSVNILPGGHHPHLEDPEPCARLLAPFFAAESAS 284
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A2A4SQQ0_9DELT (Alpha/beta hydrolase n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4SQQ0_9DELT) HSP 1 Score: 169 bits (427), Expect = 1.820e-44 Identity = 104/284 (36.62%), Postives = 160/284 (56.34%), Query Frame = 2 Query: 203 IFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGV-AEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFL 1051
+ K WG P+ LA+HG+LDN+G+FD + P L +VAID PGHG S+H Y +DY E V+ AA +LGW++F+++GHS+GGAVASL+A + PE + VF+D LGP++ +P L+ ++ R+ ++ Y + ++ V R + G+ +T S +R AT EGG + +T+D RL SSP Y++++ +L+ I + CL+I GE G+L + + + F + +RL PG+HHLHLD T VA FL
Sbjct: 15 LAAKQWGNPAG-MPVLAIHGWLDNAGTFDHIAPLLPD--LNLVAIDLPGHGLSEHRPMGTNYHFIDYIEDVVAAADALGWQEFALIGHSLGGAVASLIAGTIPERILSAVFIDSLGPWSQDPCQAPHFLQRALRQRKNQSQRKSPTYPNLEQMVAMREQV----GKIETKSVEAILRRGVRAT---EGG--LTWTSDPRLTLSSPLYMSDDHARAFLENISAPCLVIEGEQGILLDNPRMRSRFGIIPQMQHQRL-----PGNHHLHLD--TPEPVARSIRCFL 279
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A7C6VZM9_9GAMM (Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6VZM9_9GAMM) HSP 1 Score: 169 bits (427), Expect = 1.820e-44 Identity = 105/287 (36.59%), Postives = 150/287 (52.26%), Query Frame = 2 Query: 203 IFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET------APLVASHTAA 1045
+ +VWG P+ LALHG+LDN+ SFD L P L G +VA+D PGHG SD Y +D+ V+ A +LGW++F+++GHS+GG +AS VAA+ PE + R ++ LGP S P LR ++ L K P +Y + + A++ R +A +SW A LV + + GD + D RLR SP YL+E +L Y++ I + L+I G G L + E AR G +R +LPG HH HL+D AP A+ AA
Sbjct: 14 LTARVWG-PTDGIPVLALHGWLDNAASFDALAPLLP--GVRLVALDLPGHGHSDCRPPGVHYHFVDFIPDVVATADALGWDRFALLGHSLGGGIASFVAATLPERIARLAMIEGLGPPTSNPADGPTHLRKAIEQMNGLPRKRPPLYPNLEAAIQARCEA-------SGLSWTAAAILVGRSIQAV--GDGYGWRTDPRLRFVSPLYLSEPQILAYMERIAAPALLICGADGYLVKRAYMQERYAR--IAGLTVR--ILPGGHHPHLEDPEPCARLLAPFFAADRAA 284
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: UPI00145EDDEF (alpha/beta hydrolase n=1 Tax=Candidatus Competibacter phosphatis TaxID=221280 RepID=UPI00145EDDEF) HSP 1 Score: 168 bits (425), Expect = 3.240e-44 Identity = 101/272 (37.13%), Postives = 146/272 (53.68%), Query Frame = 2 Query: 203 IFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGVAEFVARKEACGERLRDL---VLPGSHHLHLDD 1009
+ + WG P+ LALHG+LDN+ SFD L P L +VA+D GHGRS+H Y +D+ V+ AA +LGW++F+++GHS+GG +AS VAA+ PE ++R ++ LGP S P LR ++ AL K P VY + + A++ R +A +SW A LV + +GG + D RLR SP YL+E +L Y++ I + L+I G G L + E AR + DL +LPG HH HL+D
Sbjct: 14 LAARAWGPPNGV-PVLALHGWLDNAASFDALAPLLPNT--RLVALDLTGHGRSEHRPPGIHYHFVDFIPDVVAAADALGWDRFALLGHSLGGGIASFVAATLPERIDRVAMIEGLGPPTSDPADGPANLRKTIQQMDALPHKRPPVYANLEAAIQARCEA-------SGLSWVAATILVERGVRLVDGG--FGWRTDPRLRFVSPLYLSEPQILAYMERIVAPALLICGADGYLVKRAYMQERYAR-------IADLTVKILPGGHHPHLED 266
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A3S0WEZ8_9GAMM (Alpha/beta hydrolase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0WEZ8_9GAMM) HSP 1 Score: 166 bits (421), Expect = 1.240e-43 Identity = 103/286 (36.01%), Postives = 147/286 (51.40%), Query Frame = 2 Query: 203 IFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGVAEFVARKEACGERLRDL---VLPGSHHLHLDDETAPLVASHTAAFL 1051
+ + WG P LALHG+LDN+ SFD L L G +VA+D PGHG SDH Y +D+ ++ AA +LGW++F+++GHSMGG +AS +AA PE + R ++ LGP S P LR ++ L K +Y + A++ R +A +SW A LV +P GG + D RLR SP YL+E +L Y++ I++ L++ G+ G L + E AR + DL +LPG HH HL+D A A A FL
Sbjct: 15 LSARAWGPPDGV-PVLALHGWLDNAASFDPLASLLP--GVRLVAVDLPGHGGSDHRPPGVHYHFVDFIPDMVAAADALGWDRFALLGHSMGGGIASFIAAILPERITRLAMIEGLGPPTSDPADGPANLRKAIDQMNGLAGKRLPIYPDVEGAIQARCEA-------SGLSWRAAATLVERGLQPVSGG--FGWRTDPRLRFVSPLYLSEPQILAYMEQIRAPALLLCGDAGYLIPRAYMQERYAR-------IADLTVKILPGGHHPHLEDPEA--CAHWLAPFL 279
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Match: A0A3S0W074_9GAMM (Alpha/beta hydrolase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0W074_9GAMM) HSP 1 Score: 166 bits (421), Expect = 1.280e-43 Identity = 99/269 (36.80%), Postives = 145/269 (53.90%), Query Frame = 2 Query: 203 IFTKVWGQPSSDRKALALHGYLDNSGSFDLLGPALAKEGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRNSSPSYLTEESVLTYLKAIKSECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDD 1009
+ + WG P+ LA+HG+LDN+ SFD L P L + +VA+D PGHG S H Y +D+ V+ AA +LGW +F+++GHSMGG +AS +AA+ PE V ++ LGP S P L ++A AL K +Y S + A++ R +A +SW A LV + EGG ++ +D RLR SP YL+E +L Y++ I + L++ G+ G L + + E AR RL +LPG HH HL+D
Sbjct: 15 LAARAWG-PADGLPVLAVHGWLDNAASFDALAPLLPE--LRLVALDLPGHGHSAHRPPGTHYHFVDFVPDVVAAADALGWSRFALLGHSMGGGIASFLAAALPERVTHLALIEGLGPPTSNPADGPDHLVKAMAQMNALTHKRLPLYASIEAAIQARCEA-------GGLSWQAAAILVERGLQAVEGG--FRWRSDPRLRFVSPLYLSEPQILAYMERITAPALLLCGDAGYLISRAYMQERYARIA----RLCIHILPGGHHPHLED 267 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1021.199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1021.199.1 >prot_E-siliculosus-1a_F_contig1021.199.1 ID=prot_E-siliculosus-1a_F_contig1021.199.1|Name=mRNA_E-siliculosus-1a_F_contig1021.199.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=338bp MTARRLGSTLCRNMSASHTRSADVVAGKSFVTSSNGSNIFTKVWGQPSSDback to top mRNA from alignment at E-siliculosus-1a_F_contig1021:24645..31835- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1021.199.1 ID=mRNA_E-siliculosus-1a_F_contig1021.199.1|Name=mRNA_E-siliculosus-1a_F_contig1021.199.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7191bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1021:24645..31835- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1021:24645..31835- >mRNA_E-siliculosus-1a_F_contig1021.199.1 ID=mRNA_E-siliculosus-1a_F_contig1021.199.1|Name=mRNA_E-siliculosus-1a_F_contig1021.199.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2028bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1021:24645..31835- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |