prot_E-siliculosus-1a_F_contig1021.198.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1021.198.1
Unique Nameprot_E-siliculosus-1a_F_contig1021.198.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length860
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1021.198.1 vs. uniprot
Match: A0A6H5KC47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC47_9PHAE)

HSP 1 Score: 763 bits (1969), Expect = 3.340e-268
Identity = 436/533 (81.80%), Postives = 440/533 (82.55%), Query Frame = 0
Query:  403 MTDRMEGQSLNVIAALALANETALENRDRFAYFRRWSDEYAGVRTAGVQGLVAAVGISGAVGLLGVAAGLAQGKACSPCINLLRLTCAVTFTTTWAAFILSSLVIVGAVAWSDGCQFLNLAATRGWETAGLDGLSAGVLDGCLRGNAVTEEFNITDALGFFESYPGTAEEVGALNATFAETDVETAIYAISDFVYSLNATAVAVSLLDFYTNAEVNGSLLLEPDCPYN----------------------------------------------------------------------------HEQQHETALDYMSRVFNSSDCSSINGDLLSAWDLAARERAYRDQMQDDLTCIATSSNAECSNXXXXXXXXXXXXXXXXXXTFSLSPCSCTSDGCTGAPDTLLAYFRAFADNVTALRADLAGLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAMCGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLSTEEDIVMEEY 859
            MTDRM+GQSLNVIAALALANETALENRDRFAYFRRWSDEYAGVRTAGVQGLVAAVGISGAVGLLGVAAGLA+GKACSPCINLLRLTCAVTFTTTWA+FILSSLVIVGAV WSDGCQFLNLAATRGWET G+DGLSA VLDGCLRGNAVTEEFNITDALGFFESYPGTAEEVGALNATFAETDVET IYAISDFVYSLNATA AVSLLDFYTNAEVNGSLLLEPDCPYN                                                                              Q  ETALDYMSRVFNSSDCSSINGDLLSAWDLAARERAYRDQMQDDLTC  TSSN EC  XXXXXXXXXXXXXXXXX  FSLSPCSCTSDG TGAPDTLLAYFRAFADNVTALRADLAGLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAMCGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLSTEEDIVMEEY
Sbjct:    1 MTDRMKGQSLNVIAALALANETALENRDRFAYFRRWSDEYAGVRTAGVQGLVAAVGISGAVGLLGVAAGLAKGKACSPCINLLRLTCAVTFTTTWASFILSSLVIVGAVTWSDGCQFLNLAATRGWETVGVDGLSAAVLDGCLRGNAVTEEFNITDALGFFESYPGTAEEVGALNATFAETDVETTIYAISDFVYSLNATAGAVSLLDFYTNAEVNGSLLLEPDCPYNVTFEGEEATAYLGRPWLALPTVSTAAETVTTGATTSDGEDGGGVGNSSSSYDSAGNLTTVDASLTPWQAGGTRQSFGRQGDETALDYMSRVFNSSDCSSINGDLLSAWDLAARERAYRDQMQDDLTCTTTSSNVECXXXXXXXXXXXXXXXXXXX--FSLSPCSCTSDGYTGAPDTLLAYFRAFADNVTALRADLAGLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAMCGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLSTEEDIVMEEY 531          
BLAST of mRNA_E-siliculosus-1a_F_contig1021.198.1 vs. uniprot
Match: B8BZV3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZV3_THAPS)

HSP 1 Score: 91.7 bits (226), Expect = 3.230e-15
Identity = 174/849 (20.49%), Postives = 311/849 (36.63%), Query Frame = 0
Query:   52 RMLAAANNLQYDCAAHNISDEEAVEAFDNTTTLSLGLGIARILTGNRRAGGQEGTWYEDTLTNLLIEYCEEEERGVHHRYVTSQNATAAKDEYGVCVQTLDSDQDTYAAGLCERVANCYWEEPREYLARGRRYTDVQYEANERAA-----RDYMQSVMLSYGTLGFVLAVAVFAGCAKFAVRRGIYNKCVCDSDLQRDRTGYTDLEQKVPVAVFFCGLVTVVVAALLGLQGNSYISSGLDLMFITMDEAAEGVNDLAHSVSLPLASFVGSLNASAEEVQRLLSNADEWIDQLESGMLLRLDSFDNRFLGRGAEFDVLAERVELASSDFMSEAVDDVYTALEMLQVRMLWYTEDFLDMTDRMEGQSLNVIAALALANETALENRDRFAYFRRWSDEYAGVRTAGVQGL-VAAVGISGAVGLLGVAAGLAQGKACSPCINLLRLTCAVTFTTTWAAFILSSLVIVGAVAWSDGCQFLNLAATRGWETAGLDGLSAGVLDGCLRGNAVTEEFNITDALGFFESYPGTAEEVGALNATFAETDVETAIYAISDFVYSLNATAVAV------------SLLDFYTNAEVNGSLLLE---PDCPYNHEQQH-----------ETALDYMSRVFNSSDCSSINGDLLSAWDLAARERAYRDQMQDDLTCI--ATSSNAECSNXXXXXXXXXXXXXXXXXXTFSLSPCSCTSDGCTGAPDTLLAYFRAFADNVTALRADLAGLLTPPLEAETAAFSG---------------------QGALANASSDSWAAR--------CASRCSFVDSHYRNFEGAMCGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLK 837
            +  A A  L+ DC     +DE   +++           + R L  + R   +  ++Y+D + N+++  C+ +  G   R V   ++ AAKD    C+   DS       GLCER +NCYW    E   R  R+   +Y A E          Y + + L +G +G                 R  Y + +C +  ++D     D+   +PV ++   LV++V+AA +   GN  +S G    F+  D   E +        LPL +    +  +A + + +    D    + ++  ++                         A+++F  +         EML    L    D  D  D +E      +  L    E +LE ++   Y+         VR + V  L + ++GI   +G LG+   L++ + CS   + ++LT  V+      A + +S  +     + D C+   +  TR +E    D +S  V +       +    N+T+ + F +       ++  +N + A   V   +  I   + S++ TA++V            +  D YT   +     L+    D PY                 E++ DYM R++N +   S   D                       CI    SS  +CS+                       PC     G T   D LL  +    D    + ADL  +    LE  ++ FS                      + +L N +S S            C    SF++  Y   +  +CG   GG+AQ+ ++++++G+    +A+ S I+  R+K
Sbjct:   18 KATAHARRLELDCPVDESADENNDQSYQGRFQSYSRGSLGRKLVESIRKKPE--SYYQDIVDNVVMLLCDVDNAG--ERCVDEGSSLAAKDAEQNCIIASDSQ---CPVGLCERQSNCYWNSVHEGQNRTTRFPPERYNAAETELYGTNNNSYARQIAL-FGIIGXXXXXXXXXXXXXXXXVR--YLRFLCSTIQRKDSYRLYDII--LPVVLYIIALVSIVIAASMAFVGNEDVSVGATNTFLHADGLIEDLLLFLGRSRLPLENIQSIVKRAALDAKGIFDGTD--YVKRDAMQIVNXXXXXXXXXXXXXXXXXXXXXXNQATAEFDEKVTPITDNVQEMLDTLEL----DLYDQADSIEASIFTAMQQLDSFYEQSLEWQNEVYYYEGQELGTRNVRRSAVMILFLVSLGIV-LLGFLGLT--LSRSRICSKVYHTIKLTGFVSSLLGTVALLSASATLCLTFVFHDACEVSGIV-TRDFEPFVGDRISPAV-NAAFNDTNLAVALNLTEKVDFEQKLEDGLIQIEMVNVSQAFQLVLEPLSQIQSALGSISGTALSVLNQATASNEFPCAFNDTYTKDTITHPWDLDRSTDDTPYTIRDNMGNPTSYDRIGLESSDDYMHRIYNKAGVCSEPSDC----------------------CIYEGPSSEFDCSSSVYADCDYGNNCAF---------PCENVQLGITEGYDALLMLY----DKEQRMTADLGVVCPAELECPSSEFSSDFSSSTLVGSVEDYKVKITDTKESLVNLASTSVGGTMIEVEDFLCNMNVSFIERRYAFIKTDICGILFGGIAQINWALWLLGISLEVVAIVSHILAVRMK 808          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1021.198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC47_9PHAE3.340e-26881.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
B8BZV3_THAPS3.230e-1520.49Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 473..483
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 834..859
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 228..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 514..810
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 453..472
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..227
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..452
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 811..833
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 484..513
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.733
NoneNo IPR availableTMHMMTMhelixcoord: 491..513
NoneNo IPR availableTMHMMTMhelixcoord: 448..470
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 811..833
NoneNo IPR availableTMHMMTMhelixcoord: 255..277
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1021contigE-siliculosus-1a_F_contig1021:17086..24047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1021.198.1mRNA_E-siliculosus-1a_F_contig1021.198.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1021 17086..24047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1021.198.1 ID=prot_E-siliculosus-1a_F_contig1021.198.1|Name=mRNA_E-siliculosus-1a_F_contig1021.198.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=860bp
MLRFGYLGVTTTAMLLVVTSSALAAAVADGVLLYKPEQVSTPDTRRQAQT
VRMLAAANNLQYDCAAHNISDEEAVEAFDNTTTLSLGLGIARILTGNRRA
GGQEGTWYEDTLTNLLIEYCEEEERGVHHRYVTSQNATAAKDEYGVCVQT
LDSDQDTYAAGLCERVANCYWEEPREYLARGRRYTDVQYEANERAARDYM
QSVMLSYGTLGFVLAVAVFAGCAKFAVRRGIYNKCVCDSDLQRDRTGYTD
LEQKVPVAVFFCGLVTVVVAALLGLQGNSYISSGLDLMFITMDEAAEGVN
DLAHSVSLPLASFVGSLNASAEEVQRLLSNADEWIDQLESGMLLRLDSFD
NRFLGRGAEFDVLAERVELASSDFMSEAVDDVYTALEMLQVRMLWYTEDF
LDMTDRMEGQSLNVIAALALANETALENRDRFAYFRRWSDEYAGVRTAGV
QGLVAAVGISGAVGLLGVAAGLAQGKACSPCINLLRLTCAVTFTTTWAAF
ILSSLVIVGAVAWSDGCQFLNLAATRGWETAGLDGLSAGVLDGCLRGNAV
TEEFNITDALGFFESYPGTAEEVGALNATFAETDVETAIYAISDFVYSLN
ATAVAVSLLDFYTNAEVNGSLLLEPDCPYNHEQQHETALDYMSRVFNSSD
CSSINGDLLSAWDLAARERAYRDQMQDDLTCIATSSNAECSNSSSSSSSS
SSSLLSSSSSTFSLSPCSCTSDGCTGAPDTLLAYFRAFADNVTALRADLA
GLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAM
CGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLST
EEDIVMEEY*
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