prot_E-siliculosus-1a_F_contig1324.1971.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1324.1971.1
Unique Nameprot_E-siliculosus-1a_F_contig1324.1971.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length93
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1324.1971.1 vs. uniprot
Match: D8LSC7_ECTSI (Cytochrome b561 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC7_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.200e-51
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0 
Query:    1 MGLLLYDLSTVSFVLGLWTFFGWSVVAIVVPLMLAYAWLNVNLQMHETKHITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGEREYPL 92
            MGLLLYDLSTVS VLGLWTFFG SVVA+VVPLMLAYAWLNVNLQMHETKHITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGEREYPL
Sbjct:  190 MGLLLYDLSTVSVVLGLWTFFGLSVVAVVVPLMLAYAWLNVNLQMHETKHITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGEREYPL 281
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSC7_ECTSI1.200e-5196.74Cytochrome b561 domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1324contigE-siliculosus-1a_F_contig1324:27147..28057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1324.1971.1mRNA_E-siliculosus-1a_F_contig1324.1971.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1324 27147..28057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1324.1971.1 ID=prot_E-siliculosus-1a_F_contig1324.1971.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1971.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=93bp
MGLLLYDLSTVSFVLGLWTFFGWSVVAIVVPLMLAYAWLNVNLQMHETKH
ITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGEREYPL*
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