mRNA_E-siliculosus-1a_F_contig1020.193.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1020.193.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1020.193.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: D8LQ88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ88_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 9.200e-99
Identity = 154/163 (94.48%), Postives = 156/163 (95.71%), Query Frame = 1

Query:  187 MTTSRGGCWSTLIEEESGCQTCIVQATSSSTTATDDPPAAQWNSSVFSTFFEMELDPCPESVSDIYGTPPGGVVSYQEVLSADCRDSDXXXXXXXXXXSVWLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTG 675
            MTTSRGGCWSTLIEE+SGCQTCIVQATSSSTTATDDPPA+QWNSSVFS FFEMELDPCPESVSD YGTPPGGVVSYQEVLSADCR SD   XXXXXX SVWLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTG
Sbjct:    1 MTTSRGGCWSTLIEEQSGCQTCIVQATSSSTTATDDPPASQWNSSVFSKFFEMELDPCPESVSDFYGTPPGGVVSYQEVLSADCRHSDDDNXXXXXXDSVWLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTG 163

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: D8LHR0_ECTSI (C-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR0_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 1.780e-41
Identity = 106/282 (37.59%), Postives = 145/282 (51.42%), Query Frame = 1

Query:  145 RGKGAFFSGCTSRSMTTSRGGCWST------LIEEESGCQTCIVQATSSSTTATDDPPAAQWNSSVFSTFFEMELDPCPESV--SDIYGTPPGGV--VSYQEVLSADCRDSDXXXXXXXXXXSVWLAFENS--CYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTGLQKTSDDGTWSWRDSLAGFTPGDFDASVSFQDWGEGLDASSSYESTGA---SCLEITPYYPKAWNPFSCEVNKQYVCERPAAPG---SGSSSP 936
            RGKGAF SGC + S  +  GGCW+        IEE  GCQTC +Q  +             ++ +VF   F  ELDPCP+ +  + +Y    GG+  V+   + S  C +              WL FE++  CY KS     A N  DA + C E GA +++++SEAENDF+ HN+L+ GF GE YTG+ K S    W W    +      ++    + DW EG +   +    G    SC+EI PY PK WNPFSC+V K YVCE PA  G   +G++SP
Sbjct:    6 RGKGAFLSGCVTLSDESYLGGCWTQDDDFGERIEETDGCQTCTIQEDA-------------FSEAVFPIMFPAELDPCPDDLDYTALYEGTYGGLSLVTAASLSSTGCPEG-------------WLYFEDTGNCYFKSPNTAKAENQADAVSICEEEGAWVIAIDSEAENDFLLHNMLFTGFFGETYTGMTKESPSDEWEWPAESSDTA---YNCVGDYSDWLEGAEIGCAAVFDGGEDGSCMEIFPYEPKGWNPFSCDVGKHYVCEMPATAGGEETGTASP 258

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: A0A383WIY0_TETOB (C-type lectin domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WIY0_TETOB)

HSP 1 Score: 94.0 bits (232), Expect = 2.100e-16
Identity = 90/300 (30.00%), Postives = 129/300 (43.00%), Query Frame = 1

Query:  112 CATLVPIEDRRRGKGAFFSGCTSRSMTTSRGGCWSTLIEEESGCQTCIVQATSSSTTATDDPPAAQWNSSVFSTFFEMELDPCPESVSDIY------GTPPGGVVSYQEVLSADCRDSDXXXXXXXXXXSVWL--AFENSCYSKSS-YLDAAVNWEDADARCGEV--GARLVSLESEAENDFVTHNLLWIGFLGEAYTGLQK--TSD---DGTWSWRDSLAGFTP-----GDFDASVSFQDW---GEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCER-PAAPGSGSSSP 936
            C  L+  E+  RG G F+      S   S  G W  +    + C+TCI   TS +  A+DD PA                  CP  V   Y            VV     L+ +               + WL     + CY KSS     +  +++A  RC  +  GA ++++    E++FV  NLL++G  GE YTGL+K  +SD   D  W W  + +  T      G      S+ ++   G G+    SY   G  C+EI P  PK WNPF+C+V KQY+CER P  PG   ++P
Sbjct:   26 CPALMAEEEVIRGFGTFYD-----STCASAAGDWGGV----NCCRTCIWHNTSVAQFASDDLPA------------------CPPCVRQYYEAAFRLANASLNVVPLTAYLNPE---------KCPFGANGWLYNPANDRCYYKSSGRRGISSGFDNAVMRCNTLHAGASMININDAQEDEFVRLNLLYVGTFGETYTGLKKLGSSDPAFDNQWYWLQNASQLTAPLASVGSRLLPTSYNNFNYPGRGI----SYSEAGPLCMEILPQKPKFWNPFACDVIKQYLCERAPVQPGENYTTP 285

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: A0A7J7Q9X4_9CHLO (C-type lectin domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q9X4_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 7.660e-11
Identity = 60/161 (37.27%), Postives = 79/161 (49.07%), Query Frame = 1

Query:  481 SVWL--AFENSCYSKSSY---LDAAVNWEDADARCGEV--GARLVSLESEAENDFVTHNLLWIGFLGEAYT----------GLQKTSDDGTWSWRDSLAGFTPGDFDASVSFQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCERPAA 912
            S WL     N CY KSSY   + A +   DA  RC  +  GA ++++    E +FV  NLL+ GF GE YT          GLQ       W+  +S+A     D+    +F + G G D    Y  +   C+EI P  PK +NPFSC V KQY+CER  A
Sbjct:  100 SGWLYNPANNRCYYKSSYDRGISAGIT--DAINRCFTLHAGASILNIADAQEEEFVRLNLLYAGFFGETYTSCICPSATARGLQLPQ--AAWARPESVAT----DYH---NFNEPGRGFD----YYESEVVCMEILPNKPKYYNPFSCAVLKQYICERSVA 245

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: K1QVJ2_CRAGI (Low affinity immunoglobulin epsilon Fc receptor n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QVJ2_CRAGI)

HSP 1 Score: 68.2 bits (165), Expect = 6.040e-10
Identity = 46/166 (27.71%), Postives = 71/166 (42.77%), Query Frame = 1

Query:  409 SYQEVLSADCRDSDXXXXXXXXXXSVWLAFENSCYSKSSYLDAAVN-WEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTGLQKTSDDGTWSWRDSLAGFTPGDFDASVSFQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCER 903
            S   V S  CRD              WL   NSCY+   ++DA  + W +A   C  VGA+LV +E+E+EN+F+  +L  IG     + GL     +G + W+ +           +V + DW  G      +      C E+   +   WN   C V   ++CE+
Sbjct:   13 SVYAVNSQGCRDG-------------WLHHGNSCYA---FIDAEPDGWIEAMFYCSSVGAKLVEIETESENNFLKRHLQTIGATKNYWIGLSDAIKEGRFVWQTTQD---------NVDYTDWAPGEPNDDHHTE---DCAELFQPFSFHWNDAPCSVKSNFICEK 150

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: A0A485P1I4_LYNPA (C-type lectin domain family 4 n=1 Tax=Lynx pardinus TaxID=191816 RepID=A0A485P1I4_LYNPA)

HSP 1 Score: 62.4 bits (150), Expect = 5.400e-8
Identity = 42/143 (29.37%), Postives = 68/143 (47.55%), Query Frame = 1

Query:  487 WLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYT---GLQKTSDDGTWSWRDSLAGFTPGDFDASVSFQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCERP 906
            W +F++SCY     L+    W  ++  C ++GA LV++ SEAE +F+      + FL   ++   GL     +G WSW D     TP  FD  + F  W EG    ++Y+      + +      AWN F C   ++ +C+ P
Sbjct:   17 WRSFQDSCYLP---LNDNKTWAKSERNCTDMGAHLVTITSEAEQNFI------VQFLDRRFSYFLGLTDEDHEGQWSWVDK----TP--FDPHIVF--WHEGEP--NNYKQNENCVILVNVQDKWAWNDFPCNFERRRICKLP 140

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: A0A6J8DY73_MYTCO (C-type lectin domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8DY73_MYTCO)

HSP 1 Score: 63.9 bits (154), Expect = 7.660e-8
Identity = 40/142 (28.17%), Postives = 61/142 (42.96%), Query Frame = 1

Query:  487 WLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTGLQKTSDDGTWSWRDSLAGFTPGDFD-ASVSFQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCERPA 909
            W++F N CY    ++   V W+ A   C   G RLV +++  E+ ++T  L       E + G+     +G W W          DFD +S+SF  W  G       E+ G  C +        WN   C +   YVCE+P+
Sbjct:  107 WISFSNHCYL---FVYEKVTWKHAKVECQNKGGRLVKIDNNDEDSWLTSVL-----KDEVWMGMSDIQIEGYWIW----------DFDMSSLSFNQWHPGEPNGGGRENCGLYCKQRCKQSSFVWNDAVCSLVYGYVCEKPS 230

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: UPI00046B7F83 (C-type lectin domain family 4 member E isoform X1 n=2 Tax=Eptesicus fuscus TaxID=29078 RepID=UPI00046B7F83)

HSP 1 Score: 62.8 bits (151), Expect = 1.750e-7
Identity = 48/169 (28.40%), Postives = 76/169 (44.97%), Query Frame = 1

Query:  403 VVSYQEVLSADCRDSDXXXXXXXXXXSVWLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTGLQKTSDDGTWSWRDSLAGFTPGDFDASVSFQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCERPA 909
            V  Y+E +  +C ++           S W+ F++SCY  S+     + W ++   C  +GA LV + SE E +F+ H         E Y GL     DG W W D     TP  F  S+SF  W EG + ++       + +  +    + WN  +C +N  ++CE PA
Sbjct:   57 VQPYEEFVEFNCYNNVSGSVKNCCPLS-WIHFQSSCYFFSTN---TLTWSESVKNCSSMGAHLVVINSEEEQEFLFHAK---PKNREFYIGLTDQVIDGQWKWVDG----TP--FTESLSF--WAEG-EPNNLVTVEDCATIRDSKNPRQNWNDMACFLNMFWICEMPA 209

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: A0A7J7PFC2_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PFC2_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 2.430e-7
Identity = 58/176 (32.95%), Postives = 75/176 (42.61%), Query Frame = 1

Query:  481 SVWL--AFENSCYSKSSY---LDAAVNWEDADARCGEV--GARLVSLESEAENDFVTHNLLWIGFLGEAYT----------GLQKTSDDGTWSWRDSLAGFTPGDFDASVS---------------FQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCERPAA 912
            S WL     + CY KSSY   + A +   DA  RC  +  GA ++++    E +FV  NLL+ GF GE YT           LQ        + +  +    P     SVS               F + G G D    Y      C+EI P  PK +NPFSC V KQY+CER  A
Sbjct:  108 SGWLYNPANDRCYYKSSYDRGISAGIT--DAINRCFTLHAGASILNIADAQEEEFVRLNLLYAGFFGETYTFNALPSCVARPLQYMLRMPLQAHQVLVEAGMPSSMSHSVSGAVLHSAKQATDYHNFNEPGRGFD----YYELEVVCMEILPNKPKYYNPFSCAVLKQYICERSVA 277

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Match: A0A6P4WWQ3_PANPR (C-type lectin domain family 4 member D n=14 Tax=Felidae TaxID=9681 RepID=A0A6P4WWQ3_PANPR)

HSP 1 Score: 60.8 bits (146), Expect = 6.500e-7
Identity = 43/140 (30.71%), Postives = 67/140 (47.86%), Query Frame = 1

Query:  487 WLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTGLQKTSDDGTWSWRDSLAGFTPGDFDASVSFQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCERP 906
            W +F++SCY     L+    W  ++  C ++GA LV++ SEAE +F+   LL   F    + GL     +G WSW D     TP  FD  + F  W EG    ++Y+      + +      AWN F C   ++ +C+ P
Sbjct:   84 WRSFQDSCYLP---LNDNKTWAKSERNCTDMGAHLVTITSEAEQNFIIQ-LLDRRF--SYFLGLTDEDHEGQWSWVDK----TP--FDPHIVF--WHEGEP--NNYKQNENCVILVNVQDKWAWNDFPCNFERRRICKLP 207

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1020.193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQ88_ECTSI	9.200e-99	94.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LHR0_ECTSI	1.780e-41	37.59	C-type lectin domain-containing protein n=1 Tax=Ec...	[more]
A0A383WIY0_TETOB	2.100e-16	30.00	C-type lectin domain-containing protein n=2 Tax=Te...	[more]
A0A7J7Q9X4_9CHLO	7.660e-11	37.27	C-type lectin domain-containing protein n=1 Tax=Sc...	[more]
K1QVJ2_CRAGI	6.040e-10	27.71	Low affinity immunoglobulin epsilon Fc receptor n=...	[more]
A0A485P1I4_LYNPA	5.400e-8	29.37	C-type lectin domain family 4 n=1 Tax=Lynx pardinu...	[more]
A0A6J8DY73_MYTCO	7.660e-8	28.17	C-type lectin domain-containing protein n=1 Tax=My...	[more]
UPI00046B7F83	1.750e-7	28.40	C-type lectin domain family 4 member E isoform X1 ...	[more]
A0A7J7PFC2_9CHLO	2.430e-7	32.95	Uncharacterized protein n=1 Tax=Scenedesmus sp. NR...	[more]
A0A6P4WWQ3_PANPR	6.500e-7	30.71	C-type lectin domain family 4 member D n=14 Tax=Fe...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1020	contig	E-siliculosus-1a_F_contig1020:8057..13182 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1617
Model size	1617
Exons	8
Ec32 ortholog	Ec-26_005740.1
Ec32 ortholog description	C-type lectin fold
Hectar predicted targeting category	signal peptide
BRITE	ko00000,ko00001,ko04090,ko04091,ko04131
Best eggNOG OG	NA\|NA\|NA
Best tax level	Aves
COG Functional cat.	T
EggNOG OGs	38GR9@33154,3BBE1@33208,3CTZ0@33213,4803E@7711,48X4Q@7742,4GKFD@8782,KOG4297@1,KOG4297@2759
EggNOG free text desc.	Macrophage mannose receptor 1-like
GOs	GO:0002237,GO:0002376,GO:0003674,GO:0004888,GO:0005488,GO:0005537,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005886,GO:0005887,GO:0006810,GO:0006897,GO:0006898,GO:0006950,GO:0006952,GO:0006955,GO:0007154,GO:0007165,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009986,GO:0009987,GO:0010008,GO:0010033,GO:0012505,GO:0016020,GO:0016021,GO:0016192,GO:0023052,GO:0030246,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0032496,GO:0033993,GO:0034097,GO:0034341,GO:0036094,GO:0038023,GO:0038024,GO:0042221,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045087,GO:0048029,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0051716,GO:0060089,GO:0065007,GO:0070670,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071346,GO:0071353,GO:0071396,GO:0071944,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:1901700,GO:1901701
KEGG Pathway	ko04145,ko05152,map04145,map05152
KEGG ko	ko:K06560
Preferred name	MRC1
Seed eggNOG ortholog	59894.ENSFALP00000007767
Seed ortholog evalue	2.1e-09
Seed ortholog score	70.9
Taxonomic scope	Metazoa

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1020.193.1	prot_E-siliculosus-1a_F_contig1020.193.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1020 8057..13182 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1020:8057..13182+
coding sequence from alignment at E-siliculosus-1a_F_contig1020:8057..13182+

protein sequence of mRNA_E-siliculosus-1a_F_contig1020.193.1

>prot_E-siliculosus-1a_F_contig1020.193.1 ID=prot_E-siliculosus-1a_F_contig1020.193.1|Name=mRNA_E-siliculosus-1a_F_contig1020.193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=539bp
MYQSRKVKRGVVASNTVVLAVVLGSVTGILAASTTEECATLVPIEDRRRG
KGAFFSGCTSRSMTTSRGGCWSTLIEEESGCQTCIVQATSSSTTATDDPP
AAQWNSSVFSTFFEMELDPCPESVSDIYGTPPGGVVSYQEVLSADCRDSD
DDNDDNDDSDSVWLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSL
ESEAENDFVTHNLLWIGFLGEAYTGLQKTSDDGTWSWRDSLAGFTPGDFD
ASVSFQDWGEGLDASSSYESTGASCLEITPYYPKAWNPFSCEVNKQYVCE
RPAAPGSGSSSPQQSATTAPELSPSPVDDGVARGSQGTPAPTASATASFV
GSASSEEFSSNFRTESPTGSPTGSPTSAPTAMYSLADGTMVARDDASCAE
RLGEHEQLSLATYDMSVFNDAAGCEETLLTEEPHWCNSFEIGQECRSCWL
SCDGARLYLAEFSWLRDDKIIFCPGVGLSDFGDDCGNDDNNGHNDDNSRP
RHRNLRETFQKFDSLSQETAPAIRSLLSSQFRVFLRRP*

mRNA from alignment at E-siliculosus-1a_F_contig1020:8057..13182+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1020.193.1 ID=mRNA_E-siliculosus-1a_F_contig1020.193.1|Name=mRNA_E-siliculosus-1a_F_contig1020.193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5126bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1020:8057..13182+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACCAAAGCCGGAAAGTGAAGCGTGGTGTAGTGGCAAGCAACACAGT
GGTGCTCGCGGTTGTTCTGGGCTCAGGTACGGTCGCACGGCGTCCCGGAA
ATGTATGTATCGGTCGGTTGCAGCTGCTGGCAACCAACACAGATCGGTGA
GGCATGCGATCCATGAAGATCGCGAGAAAAAATAAAGATCCGAATGGCCT
CCGCCGTCATCTGATATGACGGACCAACTGCCTTTGCATTTTGTTCGCGA
AAAACACAACAAACGCAGTCACAGGTATCCTGGCCGCGTCGACCACTGAA
GAATGTGCGACGCTGGTGCCAATTGAAGACCGAAGGAGGGGGAAAGGGGC
GTTTTTCAGCGGCTGTACAAGCCGGTCGATGACTACTAGCCGCGGCGGGT
GCTGGTCTACGCTCATCGAAGAGGAGAGTGGGTGCCAAACGTGCATTGTG
CAGGTCCGCATCTCGTCCTTAGATCATGTGTTGCTGCGCACTCGTTGTCT
CTCTGTGGTCGGTGGTTTTTAGATAGTCTGTGGATACATTCCATTCACCG
TGTACCGGTGCGTGAACTACTGCTGTAACAACTGGTGCTGCTGATGTTGT
AAAATATGTTTGTGTTCTAGTTTGCAGTCCCATCACTTCTTTCTATGGCA
GGGTTTTCCCCGCTTTCCGAATCCGGTGATGACGTGTGTGCTCACGTTGT
TTCGTACCACAGATGATAGGAATAGGTCCTAGGGGTGGCAAATCTGACCA
ACACAATACGGAAGTGCGACTCCCGCAGAGATCCTCCCAAAGCCTCCTCC
CAAAGCCAACATGCTCGATATCGCCACCCTCCCTGTTGCGTAGTAATCAA
GCGTCCATATGGTCCAGGAGATGAGTTCTTCTACCCCCTCGAGTATATCC
TCCTACTCCCCTGGCGCTCCAAAGTAGTTGTGTATCATCATGCTGAATGT
TGTCGTCCCGAACGGGTGAACCAACACCACAGGCCACCAGCAGCAGCACA
ACCGCAACCGATGACCCGCCGGCGGCACAGTGGAATTCCTCGGTGTTCAG
CACGTTCTTCGAGATGGAGCTAGACCCTTGCCCCGAATCCGTCTCTGATA
TATACGGGACTCCGCCAGGGGGCGTCGTGTCCTACCAGGAGGTGCTATCG
GCCGACTGCCGTGACAGCGACGACGACAATGACGACAATGACGACAGCGA
CAGCGTGTGGCTCGCGTTCGAGAACAGCTGCTACTCCAAGAGCTCATACT
TGGACGCGGCAGTCAACTGGGAGGATGCGGACGCTAGGTGAGTAGACAGA
GGTTTCTCAGAGGACAGATGATGGGCTTTCCTGGCAAGACCACCCGATCG
CCTTAGCTGTTTTTTTTGGGGGGCCCCAGTCAGGCAAAAATTGGTATCCA
CGAGAATTTCTGTGGCTGTTAGTCGCTTTTTCGTTCACGTCGGTTTCTCT
GGATGAACGGGGGTGACGACGTTGGGTCCAATTGCAGGTGTGGGGAGGTG
GGTGCGAGGCTCGTGAGCCTTGAAAGCGAGGCCGAGAATGACTTCGTCAC
TCACAATCTGCTGTGGATTGGTTTCCTTGGCGAGGCGTACACAGGTGAGC
TTTTCCTTCTTCCGGGCGGTGCTCCAGGCAAGACTTCGTGCCCCCCTAGG
AGTCTCGCACCTCATACAAATGCTGCCTGCCTACAGTGCACCAGAATGGC
GTTGAGTGATGTGATACGCAATCGAGAGCATTACTACCCAGCTTTTGTCC
TCCCTCCTCCGCCCTGATCTGCACACGCCACAAAGAACATGGGGGTGCTG
GCGTCGAACCCATCCACCCGCTCTCACAACTTTCGTTCGCCGCCCCCTAT
AGAAACCCAAAGGTGTAGGTATAATGTTGCACCGCTGATTGTGCAAGGAA
TGTTGTCTCGGTAAACCCCGAGCCTAACACTCACGGAAACGTGCCAGCTG
GTGTGCCTTATACCGCGACCGTGGAAGGGGGGCCTACTGCAACCATGTTC
GACAGAAGGCTGGACATGGTTGACCTCTACCAACGTACGTGGAATTTATG
ATTTTATGATGGTCATCTCTTGGCGTTGCGTTTCCCAAAATGAGACGCAC
GTGTTTTCTTGCATCATCAACACATGCCTTTAGGACTGCAAAAGACATCC
GATGACGGCACGTGGAGCTGGCGGGACTCCCTGGCCGGCTTTACGCCCGG
AGACTTCGACGCGTCCGTGAGTTTTCAGGACTGGGGGGAAGGACTAGACG
CCTCCTCTTCCTACGAGAGCACGGGAGCCTCTTGCCTGGAGATAACCCCT
TACTACCCCAAAGCGTGGAACCCTTTCTCGTGCGAGGTGTGTAGACACAC
AGCGCCGTCGTTGTGCTGTCGTTGTTGTCGTCGTTGTCGTCGTGGTCGTG
GTCGTGGTCGTTGTCGTTTTTGTTGTGTTTTTGTTGTTGTTGTTGCAACA
TCCAGGTTGTGGCCCCGAGGGTTTCTGAGCTTGGGGGGCGTCGTGGAGAC
GTTTTAGGTCATTGTCTTCATTTGTTATTGACTATATCGTTACATGTTTG
TGCCGGCCAATGGACATGAACTTGAGCGCCTGTTGTCCGGCCGTAGAGTT
AAGTCTTGCCGTGCTATGAGCTGCCTACCCGCGGCCGTACCCACTGTCCT
GCTTTCACTGATAGTGATATTACCTTCGTATTTAGTGTCGACTCGCCAAA
CGTACGAGGAATGCTCATGCTTGGTATTGAGGAACACGGCTGTTTCGCTT
CAATTGGTTTAGACTTCACATTTCGAGCGGCCCTTTTAGGTTCAATCACT
TCAAGGACAGAAATACCTCATGGGTTGGGATGTAGGCCGGGACCGAATAA
AAAAAGCTCGCACCAAGCGCAACCCAAACGTCCGAAGACCTCCCCAAAAC
CTGCATCGAGACAAAGCTACGCTAACCAGCCCTCGACGCACATGAGGAGC
AGCGCTGGACCAAACTTCAGGTTCGGCTAGAGATTTCTTGCCGGTCTCCC
CTTACTCCGCGTCCGTCATGCCTGTGTCCCCTTTCACCCCAAGGTGAACA
AGCAATACGTGTGCGAGAGGCCAGCAGCGCCGGGATCGGGTTCCTCCAGC
CCCCAACAATCGGCTACGACAGCCCCGGAGCTATCCCCTTCACCGGTGGA
CGATGGTGTAGCACGTGGTTCTCAGGGTACACCCGCACCTACCGCCTCCG
CCACAGCCTCGTTCGTCGGATCAGCTTCTTCCGAGGAATTTTCTTCGAAC
TTTCGCACGGAATCGCCCACCGGGTCACCAACGGGGTCTCCGACATCTGC
CCCAACAGCAATGTACAGCCTGGCGGATGGTACCATGGTCGCCAGGGATG
ACGCCAGCTGCGCAGAGAGGCTGGGCGAACATGAACAGTTGTGAGTACAG
CGTGGCGGGGGGCATTGTTTGTGCAGCAACTCCACGGTGGCACGGCCGAC
GCCTAGCGCTGTTTTGATCTTGGAATCGTTGTCTGCATTAGCTCAAAGAT
CTCTCCTTTAGCTCAAAAGTCTTTATTTTCCTATCTTGAGCATCTCTCTG
ATTCGGGGGTGCAGAAGCTAACCGCTTTGAACAATCTCTACCGTCATCGT
GATGACGCCCGTTTTCTTCGTCAAGTTTTGGAGTTGACGGTACCTGTGAT
GTGCAGAACGACAAAGGAGGGGTTCGAACGAGATGCTTCTGTGGGCTCAG
TAGGGCGGGGGGGGGGGTGTTGTGGTGCGTGGTATTCCAGTTTGCCTCAA
CTTCAAGTCCATGGAGTTTCATGGTGTGGGCACGTCGTCTACGTCCCTGG
GGTTGTCGACAAAGGGAAGATACAAACACACCTCTAACACGTGGGAATCT
TGCGGGGGGGCCCTCATTGTATCACACACCCTTGCGCCGATTCTCGTGAA
AATCCCCGACAAACTGGTGGTGCTACTTCCACGTTCGATTCGTAGGTCAT
TGGCCACATACGACATGAGCGTCTTCAATGATGCCGCCGGTTGTGAGGAA
ACCCTCCTCACGGAAGAGCCGCACTGGTGCAACTCCTTCGAGATCGGGCA
GGAGTGCCGCTCCTGCTGGTTGTCCTGCGACGGGGCTCGCCTGTACTTAG
CGGAATTTTCCTGGTTGCGGGACGACAAGTGAGAGAAATTATTCACTCAC
TCCGCGAGTCGATCTTCACAGCTTGTCTCTGGTCGTACCTCGACAACGTG
TCCGGTAGGAAAGGGTACGTGTTTGATTTAGCTCTCATGAGAACATATTT
TCATCCTCGTTTCCCTTTACGGCGTGGTATCGTCCCTACTGTTGTTTGTT
CTTGTGGTTGTTTGGAGCTCATCAAATCCGACTAGAGGAAAAACTGGTTT
TGGTCGCCGTCGGTGGCCTTGTGCGCGATCAAGCGCTGACGAGATGGAAA
AACAGCTTATGTCTTGCTTTTCTACACGCGCGAGAACGTAGACGATGTTG
GGACTTGTTTTTGTTTTGTCTTCACCTCGGGAAGAAGGAGCCGCGGGCCG
AAAGGAAGCACGTTCAGCCCGCACACACCCCCTACAAAATGGCTACCGTC
ACGGCGAACAAGTTCTTATGCCCCCTTGTACGTTCCGCACACCCTTCCGC
GTCCGCCCCCACACACGACCTATGCGGTGTCTGTCATCATGTATTGTCTT
TGAACTTTAGGAACGAGCCGTGTAGCACGCCGTAGTAGTATCTCCTCATT
GTATATTGCAATTGTACATCTACACACGGAACCTCGTGGATCATCAGCTA
GCCGCTGCCGCTCGAACTGTCGTAAGAAATATACCAATATGCACGCCCAG
AGGAAAAACGATATACGTGCTCCATACACATGACCCATGAAAGCTCAACA
CCTGAAGGGAACTTTGATCTGCGTTCCTGTTTGGTGTCGCCATCGCTCTA
TCGAACCTCGCGCAGGATTATATTCTGCCCCGGCGTCGGCTTGTCAGACT
TCGGAGACGACTGTGGCAACGACGACAACAACGGCCACAACGATGATAAC
AGTCGTCCCCGCCACCGAAACCTAAGGGAGACATTTCAGAAATTTGATTC
CCTTTCCCAGGAAACGGCCCCGGCGATTAGAAGTCTATTATCGTCACAGT
TCCGCGTCTTCCTGCGGCGCCCGTGA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1020:8057..13182+

>mRNA_E-siliculosus-1a_F_contig1020.193.1 ID=mRNA_E-siliculosus-1a_F_contig1020.193.1|Name=mRNA_E-siliculosus-1a_F_contig1020.193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3234bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1020:8057..13182+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACCAAAGCCGGAAAGTGAAGCGTGGTGTAGTGGCAAGCAACACAGT
GGTGCTCGCGGTTGTTCTGGGCTCAGATGTACCAAAGCCGGAAAGTGAAG
CGTGGTGTAGTGGCAAGCAACACAGTGGTGCTCGCGGTTGTTCTGGGCTC
AGTCACAGGTATCCTGGCCGCGTCGACCACTGAAGAATGTGCGACGCTGG
TGCCAATTGAAGACCGAAGGAGGGGGAAAGGGGCGTTTTTCAGCGGCTGT
ACAAGCCGGTCGATGACTACTAGCCGCGGCGGGTGCTGGTCTACGCTCAT
CGAAGAGGAGAGTGGGTGCCAAACGTGCATTGTGCAGTCACAGGTATCCT
GGCCGCGTCGACCACTGAAGAATGTGCGACGCTGGTGCCAATTGAAGACC
GAAGGAGGGGGAAAGGGGCGTTTTTCAGCGGCTGTACAAGCCGGTCGATG
ACTACTAGCCGCGGCGGGTGCTGGTCTACGCTCATCGAAGAGGAGAGTGG
GTGCCAAACGTGCATTGTGCAGGCCACCAGCAGCAGCACAACCGCAACCG
ATGACCCGCCGGCGGCACAGTGGAATTCCTCGGTGTTCAGCACGTTCTTC
GAGATGGAGCTAGACCCTTGCCCCGAATCCGTCTCTGATATATACGGGAC
TCCGCCAGGGGGCGTCGTGTCCTACCAGGAGGTGCTATCGGCCGACTGCC
GTGACAGCGACGACGACAATGACGACAATGACGACAGCGACAGCGTGTGG
CTCGCGTTCGAGAACAGCTGCTACTCCAAGAGCTCATACTTGGACGCGGC
AGTCAACTGGGAGGATGCGGACGCTAGGCCACCAGCAGCAGCACAACCGC
AACCGATGACCCGCCGGCGGCACAGTGGAATTCCTCGGTGTTCAGCACGT
TCTTCGAGATGGAGCTAGACCCTTGCCCCGAATCCGTCTCTGATATATAC
GGGACTCCGCCAGGGGGCGTCGTGTCCTACCAGGAGGTGCTATCGGCCGA
CTGCCGTGACAGCGACGACGACAATGACGACAATGACGACAGCGACAGCG
TGTGGCTCGCGTTCGAGAACAGCTGCTACTCCAAGAGCTCATACTTGGAC
GCGGCAGTCAACTGGGAGGATGCGGACGCTAGGTGTGGGGAGGTGGGTGC
GAGGCTCGTGAGCCTTGAAAGCGAGGCCGAGAATGACTTCGTCACTCACA
ATCTGCTGTGGATTGGTTTCCTTGGCGAGGCGTACACAGGTGTGGGGAGG
TGGGTGCGAGGCTCGTGAGCCTTGAAAGCGAGGCCGAGAATGACTTCGTC
ACTCACAATCTGCTGTGGATTGGTTTCCTTGGCGAGGCGTACACAGGACT
GCAAAAGACATCCGATGACGGCACGTGGAGCTGGCGGGACTCCCTGGCCG
GCTTTACGCCCGGAGACTTCGACGCGTCCGTGAGTTTTCAGGACTGGGGG
GAAGGACTAGACGCCTCCTCTTCCTACGAGAGCACGGGAGCCTCTTGCCT
GGAGATAACCCCTTACTACCCCAAAGCGTGGAACCCTTTCTCGTGCGAGG
ACTGCAAAAGACATCCGATGACGGCACGTGGAGCTGGCGGGACTCCCTGG
CCGGCTTTACGCCCGGAGACTTCGACGCGTCCGTGAGTTTTCAGGACTGG
GGGGAAGGACTAGACGCCTCCTCTTCCTACGAGAGCACGGGAGCCTCTTG
CCTGGAGATAACCCCTTACTACCCCAAAGCGTGGAACCCTTTCTCGTGCG
AGGTGAACAAGCAATACGTGTGCGAGAGGCCAGCAGCGCCGGGATCGGGT
TCCTCCAGCCCCCAACAATCGGCTACGACAGCCCCGGAGCTATCCCCTTC
ACCGGTGGACGATGGTGTAGCACGTGGTTCTCAGGGTACACCCGCACCTA
CCGCCTCCGCCACAGCCTCGTTCGTCGGATCAGCTTCTTCCGAGGAATTT
TCTTCGAACTTTCGCACGGAATCGCCCACCGGGTCACCAACGGGGTCTCC
GACATCTGCCCCAACAGCAATGTACAGCCTGGCGGATGGTACCATGGTCG
CCAGGGATGACGCCAGCTGCGCAGAGAGGCTGGGCGAACATGAACAGTTG
TGAACAAGCAATACGTGTGCGAGAGGCCAGCAGCGCCGGGATCGGGTTCC
TCCAGCCCCCAACAATCGGCTACGACAGCCCCGGAGCTATCCCCTTCACC
GGTGGACGATGGTGTAGCACGTGGTTCTCAGGGTACACCCGCACCTACCG
CCTCCGCCACAGCCTCGTTCGTCGGATCAGCTTCTTCCGAGGAATTTTCT
TCGAACTTTCGCACGGAATCGCCCACCGGGTCACCAACGGGGTCTCCGAC
ATCTGCCCCAACAGCAATGTACAGCCTGGCGGATGGTACCATGGTCGCCA
GGGATGACGCCAGCTGCGCAGAGAGGCTGGGCGAACATGAACAGTTGTCA
TTGGCCACATACGACATGAGCGTCTTCAATGATGCCGCCGGTTGTGAGGA
AACCCTCCTCACGGAAGAGCCGCACTGGTGCAACTCCTTCGAGATCGGGC
AGGAGTGCCGCTCCTGCTGGTTGTCCTGCGACGGGGCTCGCCTGTACTTA
GCGGAATTTTCCTGGTTGCGGGACGACAAGTCATTGGCCACATACGACAT
GAGCGTCTTCAATGATGCCGCCGGTTGTGAGGAAACCCTCCTCACGGAAG
AGCCGCACTGGTGCAACTCCTTCGAGATCGGGCAGGAGTGCCGCTCCTGC
TGGTTGTCCTGCGACGGGGCTCGCCTGTACTTAGCGGAATTTTCCTGGTT
GCGGGACGACAAGATTATATTCTGCCCCGGCGTCGGCTTGTCAGACTTCG
GAGACGACTGTGGCAACGACGACAACAACGGCCACAACGATGATAACAGT
CGTCCCCGCCACCGAAACCTAAGGGAGACATTTCAGAAATTTGATTCCCT
TTCCCAGGAAACGGCCCCGGCGATTAGAAGTCTATTATCGTCACAGTTCC
GCGTCTTCCTGCGGCGCCCGTGAGATTATATTCTGCCCCGGCGTCGGCTT
GTCAGACTTCGGAGACGACTGTGGCAACGACGACAACAACGGCCACAACG
ATGATAACAGTCGTCCCCGCCACCGAAACCTAAGGGAGACATTTCAGAAA
TTTGATTCCCTTTCCCAGGAAACGGCCCCGGCGATTAGAAGTCTATTATC
GTCACAGTTCCGCGTCTTCCTGCGGCGCCCGTGA