mRNA_E-siliculosus-1a_F_contig1020.192.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig1020.192.1 vs. uniprot
Match: A0A6H5L6F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F2_9PHAE)

HSP 1 Score: 461 bits (1186), Expect = 7.050e-150
Identity = 427/548 (77.92%), Postives = 431/548 (78.65%), Query Frame = 1

Query:  220 MLQGTPGMGAPSPGPGINGMVVQQAAAAAYSAGQHPGLESVSAPRNTTSPIPPPIPKAGAPVHWPGIEGVQAGAPEGLQNAGNAGGHGAXXXXXXXXXXXXXXXXXXXXXXEGPATATHAVHGAAAVXXXXXXXXXXXXXXXXXVHLPASVQHPAYEAPRQVAPAVTAQPMAMVTPPVVHGVAPKAAPPPALAVSGHPGAGSXXXXXXXXXXXXXXNVSAAXPAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSGEGGASGEGXXXXXXXXXXXXXXXXXEGSQENEAAAAPRLAGKRPRGSMAASANKRAKEMQLRDFMLAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVANIVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGIIVSDSGLLVKAAGPAAVAAADPAGTGKDDR 1863
            MLQGTPGMGAP PGPGINGMVVQQAAAAAYSAGQHPGLESVSAPRNTTSPIPPPIPK GAPVHWPG EG QAGAPEGLQN GNAGGH  XXXXXXXXXXXXXXXXXXXXX E PAT+THA HGAAAV     XXXXXXXXXXXXVHL                               VHGVAPKAAPPPAL VSGHPGAGSXXXXXXXXXXXXXXNVSAAX A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                              RTSGEGG SGEG   XXXXXXXXXXXXX EG QENEAAAAPRLAGKRPRGSMAASANKRAKEMQLRDF+LAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVA+IVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGI+VSDSGLLVKAAGPAAVAAADPAGTGKDDR
Sbjct:    1 MLQGTPGMGAPPPGPGINGMVVQQAAAAAYSAGQHPGLESVSAPRNTTSPIPPPIPKPGAPVHWPGKEGGQAGAPEGLQNTGNAGGHXXXXXXXXXXXXXXXXXXXXXXXGESPATSTHAAHGAAAVAPPVAXXXXXXXXXXXXVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGVAPKAAPPPALTVSGHPGAGSXXXXXXXXXXXXXXNVSAAXXATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------RTSGEGGVSGEGGAAXXXXXXXXXXXXXSEGPQENEAAAAPRLAGKRPRGSMAASANKRAKEMQLRDFILAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVASIVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGIVVSDSGLLVKAAGPAAVAAADPAGTGKDDR 486

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.192.1 vs. uniprot
Match: D8LQ87_ECTSI (Contains similarity to extensin (AtExt1) from Arabidopsis thaliana n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ87_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.660e-105
Identity = 381/448 (85.04%), Postives = 386/448 (86.16%), Query Frame = 1

Query:  574 HAVHGAAAVXXXXXXXXXXXXXXXXXVHLPASVQHPAYEAPRQVAPAVTAQPMAMVTPPVVHGVAPKAAPPPALAVSGHPGAGSXXXXXXXXXXXXXXNVSAAXPAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------RTSGEGGASGEGXXXXXXXXXXXXXXXXXEGSQENEAAAAPRLAGKRPRGSMAASANKRAKEMQLRDFMLAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVANIVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGIIVSDSGLLVKAAGPAAVAAADPAGTGKDDR 1863
            HAV+GAAAV          XXXXXXXVHLPASVQHPAY+A RQVAPAVTAQPMAMV PPVVHGVAPKAAPPPALAVS HPGAG XXXXXXXXXXXXXX     XPAM   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXX     XXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  RTSGEGGASGE XXXXXXXXXXXXXXXXXEG Q+NEAAAAPRLAGKRPRGSMAASANKRAKEMQLRDFMLAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVA+IVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGI+VSDSGLLVKAAGPAAVAAADPAGTGKDDR
Sbjct:    2 HAVYGAAAVAPPVAAVTAAXXXXXXXVHLPASVQHPAYDAARQVAPAVTAQPMAMVAPPVVHGVAPKAAPPPALAVSVHPGAGXXXXXXXXXXXXXXXXXXXXXPAMAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVSAVXXXXXXXXXXXXXXXXXXAQAVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPATAAGRTSGEGGASGEXXXXXXXXXXXXXXXXXXEGPQKNEAAAAPRLAGKRPRGSMAASANKRAKEMQLRDFMLAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVASIVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGIVVSDSGLLVKAAGPAAVAAADPAGTGKDDR 449

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BLAST of mRNA_E-siliculosus-1a_F_contig1020.192.1 vs. uniprot
Match: A0A4D9D766_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D766_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.260e-5
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1

Query: 1477 QLRDFMLAVDEYGSTVPGEATRFHLQRGGLTTSNSQIVTLMSLAADHLVANIVHESSIFRNVRLQQAREQGREAAELLGEEGQMLTNEDLSLSLLSRGI 1773
            +L  F+ A+D+Y  T+P E T + LQ+GG+T ++S+I  L+SLAA+ LV+ IVH+++ +  ++ Q               +G +L  EDL  SL   G+
Sbjct:   87 ELAPFLNALDQYHPTIPEEVTAYFLQQGGVTVTDSKIKKLVSLAAEKLVSEIVHDTTTYSRMKDQ---------------DGDILKMEDLRESLGKYGV 170

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1020.192.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1020.192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5L6F2_9PHAE	7.050e-150	77.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQ87_ECTSI	2.660e-105	85.04	Contains similarity to extensin (AtExt1) from Arab...	[more]
A0A4D9D766_9STRA	1.260e-5	35.35	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]