prot_E-siliculosus-1a_F_contig1312.1909.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1312.1909.1
Unique Nameprot_E-siliculosus-1a_F_contig1312.1909.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length429
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1312.1909.1 vs. uniprot
Match: D7FK91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK91_ECTSI)

HSP 1 Score: 610 bits (1573), Expect = 2.020e-217
Identity = 328/391 (83.89%), Postives = 333/391 (85.17%), Query Frame = 0 
Query:    1 MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDALETYGNAETYRAVCKSYFGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAHLLQQREHERRWVLQQAAAVMRRCAYGSRQQGSGCAHTKLRLWTSAHLVATKSSSRRSQERPASHHGVRCDRCKKGPITGSCFRCAAGCAATAVPNDTSTCPPHCGKSGVANGVGRGVRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGFGNGFYTLCEACFPHRHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGDTGSGDGGDLWAVPVRVDSAGPLPLSQVKS 391
            MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDAL+TYGNAETYRAVCKSYFGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAHLLQQREHERRWVLQQAAAVMRRCAYGSRQQGSGCAHTKLRLWTSA+LVATKSSSRRSQERP SHHGVRCDRCKKGPITGSCFRCAAGC ATAVPNDTS CPPH GKSGVANGV RGVRRXXXXXXXXX                       XXXXXXXXXX                             CGFGNGFYTLCEACFP+RHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGDTGSGDGGDLWAVPVRVDSAGPLPLSQ ++
Sbjct:    1 MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDALDTYGNAETYRAVCKSYFGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAHLLQQREHERRWVLQQAAAVMRRCAYGSRQQGSGCAHTKLRLWTSANLVATKSSSRRSQERPPSHHGVRCDRCKKGPITGSCFRCAAGCTATAVPNDTSKCPPHGGKSGVANGVSRGVRRXXXXXXXXXEKPSPLSTILPRSSGEAPAREERXXXXXXXXXX-----------------------------CGFGNGFYTLCEACFPYRHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGDTGSGDGGDLWAVPVRVDSAGPLPLSQARN 362
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1312.1909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK91_ECTSI2.020e-21783.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.559
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 158..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1312contigE-siliculosus-1a_F_contig1312:7398..11748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1312.1909.1mRNA_E-siliculosus-1a_F_contig1312.1909.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1312 7363..11828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1312.1909.1 ID=prot_E-siliculosus-1a_F_contig1312.1909.1|Name=mRNA_E-siliculosus-1a_F_contig1312.1909.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=429bp
MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDALETYGNAETYRAVCKSY
FGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAH
LLQQREHERRWVLQQAAAVMRRCAYGSRQQGSGCAHTKLRLWTSAHLVAT
KSSSRRSQERPASHHGVRCDRCKKGPITGSCFRCAAGCAATAVPNDTSTC
PPHCGKSGVANGVGRGVRRRHHQQQQQQQQQHEKPSPPSTILPRSSGEAP
AREEREERTGGGRGGSSSGAQKKGHGGASGGGGGGGGGGGCGFGNGFYTL
CEACFPHRHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILV
RPLKAREAAPGDTGSGDGGDLWAVPVRVDSAGPLPLSQVKSRIAAGDRDD
NRGLAFASDNWQLQQDGRGVALESLDSP*
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