prot_E-siliculosus-1a_F_contig1304.1855.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1304.1855.1
Unique Nameprot_E-siliculosus-1a_F_contig1304.1855.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length390
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: D8LGT6_ECTSI (Dynein light chain 1, cytoplasmic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT6_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 1.570e-161
Identity = 316/350 (90.29%), Postives = 325/350 (92.86%), Query Frame = 0
Query:    1 MRMPGCAAGSWADFVIFVFGCGGSRKEIAAVHGRSAAERPAATGDAFDPAKPPLLLQQGDLSRGVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAVGKIEPVFCTTNEAAVGIARNXXXXXXXXXGKKSIPKEAEGSRTRDGGALALEGKTGGDKSNRSGQQQPKEGQQQQLRQRRAKPSYRRKSSGVPHTAAAFGKATIAPRRHSVDSAESPALRAPSSSVTPLEQNKQLVRHLSNSRSFGSFGSFNTAGEGDYSVRNSAFTRTPGLRRKRVERVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHG 350
            MRMPGCAAGSWADFVIFVFGCGGSRKE+AAVHGRSAAERPAATGDAFDPAKPPLLLQQGDLSRGVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VVA+GKIEP+FCTTNEAAVGIARN         GKKSIPKEAEG RTR+GGALALEG+TGGDKS  SGQQQPKEGQ QQLRQRRAKPSY   SS VP TAAAFGKA IAPRRHSVDSAESPAL+A SSSVTPLEQNKQLVRHLSNSRSFGS GSFNTAGEGDYSVRNSAFTRTPGLRRKRVERVVILAADM +QMQ+DAKESTARAMEES DHEDIAAYIKKDFDE+HG
Sbjct:    1 MRMPGCAAGSWADFVIFVFGCGGSRKEVAAVHGRSAAERPAATGDAFDPAKPPLLLQQGDLSRGVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-VVALGKIEPIFCTTNEAAVGIARNNSHHKIVDGGKKSIPKEAEGPRTREGGALALEGETGGDKSISSGQQQPKEGQHQQLRQRRAKPSYXXXSSAVPRTAAAFGKAAIAPRRHSVDSAESPALQATSSSVTPLEQNKQLVRHLSNSRSFGSLGSFNTAGEGDYSVRNSAFTRTPGLRRKRVERVVILAADMAEQMQEDAKESTARAMEESGDHEDIAAYIKKDFDERHG 349          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: A0A6H5KIG7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIG7_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 1.060e-75
Identity = 133/165 (80.61%), Postives = 137/165 (83.03%), Query Frame = 0
Query:  216 GVPHTAAAFGKATIAPRRHSVDSAESPALRAPSSSVTPLEQNKQLVRHLSNSRSFGSFGSFNTAGEGDYSVRNSAFTRTPGLRRKRVERVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKV 380
            GV HTAAAFGKA IAPRRHSVDSAESPAL+APSSS      NKQLVRHL+NSRSFGS GSFNTAGE DYSVRNSAFTRTPGLRRKR  R           +  DAKESTARAMEES DHEDIAAYIKK FDEQHGAKWHCIVGKHFGSFVTA+SN FVHLHLGKV
Sbjct:    2 GVRHTAAAFGKAAIAPRRHSVDSAESPALQAPSSS------NKQLVRHLNNSRSFGSLGSFNTAGESDYSVRNSAFTRTPGLRRKRQARQT---RSHRSTLAADAKESTARAMEESGDHEDIAAYIKKAFDEQHGAKWHCIVGKHFGSFVTAQSNGFVHLHLGKV 157          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: A0A6H5KHL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL3_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 7.680e-62
Identity = 156/218 (71.56%), Postives = 165/218 (75.69%), Query Frame = 0
Query:    1 MRMPGCAAGSWADFVIFVFGCGGSRKEIAAVHGRSAAERPAATGDAFDPAKPPLLLQQGDLSRGVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------VVAVGKIEPVFCTTNEAAVGIARNXXXXXXXXXGKKSIPKEAEGSRTRDGGALALEGKTGGDKSNRSGQQQPKEGQQQQLRQRRAKPSYR 211
            M MPGCAAGSWADF+IFVFGCGG RKE+AAV GRSAAER AATGDAFDPAKPP LLQ G+  RGVF        XXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXX       VVAVGKIEPVFCTTNEAA+G+AR+         GKK IP++ EG  TRDGGALALEG+TGGDKSN SGQQQPK GQQQQLRQRRAKPSYR
Sbjct:    1 MPMPGCAAGSWADFLIFVFGCGGRRKEVAAVQGRSAAERTAATGDAFDPAKPPPLLQHGNFGRGVFFFAAGSGGXXXXXXXXXXXXSVTTTPSRDSDDAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAVGKIEPVFCTTNEAALGMARSNNHNKIVGGGKKRIPQDTEGPWTRDGGALALEGETGGDKSNSSGQQQPKAGQQQQLRQRRAKPSYR 218          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: A0A6P4I1A9_DROKI (Dynein light chain n=2 Tax=montium subgroup TaxID=32352 RepID=A0A6P4I1A9_DROKI)

HSP 1 Score: 96.3 bits (238), Expect = 5.400e-21
Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 0
Query:  304 RVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKA 387
            + VI  ADM ++MQQDA ES  +AME+    +D+AAYIKK+FD ++   WHCIVG HFGS+VT E+  FV+ +LG++AVLLFK+
Sbjct:    5 KAVIKNADMCEEMQQDAIESATQAMEKHNIEKDVAAYIKKEFDRKYHPTWHCIVGHHFGSYVTHETRHFVYFYLGQLAVLLFKS 88          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: A0A090M3C5_OSTTA (Dynein light chain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M3C5_OSTTA)

HSP 1 Score: 96.3 bits (238), Expect = 5.710e-21
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 0
Query:  303 ERVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKA 387
            ++ VI AADM D++Q DA  ++  AME+    +DIAAY+KK+FD +HG  WHCIVG++FGS+VT ES SF++ ++  VA LLFKA
Sbjct:    6 DKAVIKAADMPDEVQDDAVATSMEAMEKFNVEKDIAAYVKKEFDRKHGPTWHCIVGRNFGSYVTHESGSFIYYYVANVAFLLFKA 90          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: A0A2U3ZPC9_ODORO (Dynein light chain n=5 Tax=Amniota TaxID=32524 RepID=A0A2U3ZPC9_ODORO)

HSP 1 Score: 94.4 bits (233), Expect = 2.770e-20
Identity = 43/85 (50.59%), Postives = 66/85 (77.65%), Query Frame = 0
Query:  304 RVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKAD 388
            + VI   DM+++MQQD+ E   +A+E+    +DIAA+IKK+FDE++   WHCIVG++FGS+VT E+  F++ +LG+VA+LLFK+D
Sbjct:    5 KAVIKNTDMSEEMQQDSVECATQALEKYNVEKDIAAHIKKEFDEKYNTAWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSD 89          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: Q8T3S8_BRABE (Dynein light chain (Fragment) n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=Q8T3S8_BRABE)

HSP 1 Score: 93.6 bits (231), Expect = 4.760e-20
Identity = 44/84 (52.38%), Postives = 66/84 (78.57%), Query Frame = 0
Query:  304 RVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKA 387
            + VI  ADM+++MQQDA +   +A+E+    +DIAA+IKK+FDE++   WHCIVG++FGS+VT E+  F++ +LG+VAVLLFK+
Sbjct:    1 KAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDEKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKS 84          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: G4VB75_SCHMA (Dynein light chain n=7 Tax=Schistosoma TaxID=6181 RepID=G4VB75_SCHMA)

HSP 1 Score: 93.6 bits (231), Expect = 5.480e-20
Identity = 42/84 (50.00%), Postives = 66/84 (78.57%), Query Frame = 0
Query:  304 RVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKA 387
            + V+  ADM+D MQQDA +  A+A+E+ +  +DIAA+IKK+FD+++   WHCIVG++FGS+VT E+  F++ ++G VA+LLFK+
Sbjct:    6 KAVVKNADMSDDMQQDAVDCAAQALEKYSVEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYMGNVAILLFKS 89          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: A0A0L1KZV9_9EUGL (Dynein light chain n=1 Tax=Perkinsela sp. CCAP 1560/4 TaxID=1314962 RepID=A0A0L1KZV9_9EUGL)

HSP 1 Score: 93.2 bits (230), Expect = 7.810e-20
Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 0
Query:  305 VVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKA 387
            + + + DMT+ +QQDA+E T +A+E+     DIA Y+KK FDE HG  WHCIVG++FGSFVT E   F++ ++  +AVLLF+A
Sbjct:    8 ITVKSTDMTESLQQDAREITMQALEKHTIQRDIAKYVKKHFDELHGPTWHCIVGRNFGSFVTHEDGCFIYFYVHDIAVLLFRA 90          
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Match: A0A3P6THM2_DIBLA (Dynein light chain n=1 Tax=Dibothriocephalus latus TaxID=60516 RepID=A0A3P6THM2_DIBLA)

HSP 1 Score: 92.4 bits (228), Expect = 1.500e-19
Identity = 41/85 (48.24%), Postives = 65/85 (76.47%), Query Frame = 0
Query:  303 ERVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHGAKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKA 387
            ++ ++  ADM++ MQQDA ++   A+++    +DIAAYIKK FD+ HG  WHCIVG++FGS+VT E+  F++ ++G+VA+LLFK+
Sbjct:    6 DQAIVKNADMSEDMQQDAIQAGKEALKQYNIEKDIAAYIKKKFDKDHGPTWHCIVGRNFGSYVTHETKQFIYFYMGQVAILLFKS 90          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1304.1855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGT6_ECTSI1.570e-16190.29Dynein light chain 1, cytoplasmic n=1 Tax=Ectocarp... [more]
A0A6H5KIG7_9PHAE1.060e-7580.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KHL3_9PHAE7.680e-6271.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P4I1A9_DROKI5.400e-2155.95Dynein light chain n=2 Tax=montium subgroup TaxID=... [more]
A0A090M3C5_OSTTA5.710e-2154.12Dynein light chain n=2 Tax=Ostreococcus tauri TaxI... [more]
A0A2U3ZPC9_ODORO2.770e-2050.59Dynein light chain n=5 Tax=Amniota TaxID=32524 Rep... [more]
Q8T3S8_BRABE4.760e-2052.38Dynein light chain (Fragment) n=1 Tax=Branchiostom... [more]
G4VB75_SCHMA5.480e-2050.00Dynein light chain n=7 Tax=Schistosoma TaxID=6181 ... [more]
A0A0L1KZV9_9EUGL7.810e-2050.60Dynein light chain n=1 Tax=Perkinsela sp. CCAP 156... [more]
A0A3P6THM2_DIBLA1.500e-1948.24Dynein light chain n=1 Tax=Dibothriocephalus latus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 300..387
e-value: 1.3E-36
score: 137.7
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 305..386
e-value: 2.6E-29
score: 101.4
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 294..387
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 302..387
e-value: 1.9E-30
score: 106.7
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 301..386
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 294..387

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1304contigE-siliculosus-1a_F_contig1304:13424..19109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1304.1855.1mRNA_E-siliculosus-1a_F_contig1304.1855.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1304 13024..22165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1304.1855.1 ID=prot_E-siliculosus-1a_F_contig1304.1855.1|Name=mRNA_E-siliculosus-1a_F_contig1304.1855.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=390bp
MRMPGCAAGSWADFVIFVFGCGGSRKEIAAVHGRSAAERPAATGDAFDPA
KPPLLLQQGDLSRGVFFFAAGSGGGSGGGSVTTTPSRDSDDACSGRGSAA
GGFGASSSESSSRQHSSSSTAVVAVGKIEPVFCTTNEAAVGIARNNNHHK
LVGGGKKSIPKEAEGSRTRDGGALALEGKTGGDKSNRSGQQQPKEGQQQQ
LRQRRAKPSYRRKSSGVPHTAAAFGKATIAPRRHSVDSAESPALRAPSSS
VTPLEQNKQLVRHLSNSRSFGSFGSFNTAGEGDYSVRNSAFTRTPGLRRK
RVERVVILAADMTDQMQQDAKESTARAMEESADHEDIAAYIKKDFDEQHG
AKWHCIVGKHFGSFVTAESNSFVHLHLGKVAVLLFKADG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2