Homology
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
D7FZ56_ECTSI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ56_ECTSI)
HSP 1 Score: 170 bits (431), Expect = 1.200e-49
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 2
Query: 119 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKESKES 355
MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFK+RKAMMKESKES
Sbjct: 1 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKERKAMMKESKES 79
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
I1S5X9_GIBZE (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=10 Tax=Fusarium TaxID=5506 RepID=I1S5X9_GIBZE)
HSP 1 Score: 109 bits (272), Expect = 4.760e-26
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 2
Query: 119 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKESKES 355
MG D +AT EEM AK+P+A+RDSCAHLL+PLNKCRR T Y PW+CS ERH YEKCQY++FK R A M E +ES
Sbjct: 1 MGSDAITEPRQATREEMRDAKLPLAYRDSCAHLLIPLNKCRRDTWYAPWKCSDERHSYEKCQYVEFKKRVAKMDELRES 79
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
A0A6A6PDY7_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6PDY7_9PEZI)
HSP 1 Score: 108 bits (269), Expect = 1.300e-25
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 2
Query: 119 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKE 343
M G HD G A+ EEM AAK+P+A+RDSCAHLL+PLN+CR YLPW+C +ERH YEKCQY +FK R A M+E
Sbjct: 1 MAGAHDAPAGPASREEMSAAKLPLAYRDSCAHLLIPLNRCRVEEYYLPWKCENERHSYEKCQYEEFKKRVAKMEE 75
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
A0A8H4LWB4_9HYPO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=Ophiocordycipitaceae TaxID=474942 RepID=A0A8H4LWB4_9HYPO)
HSP 1 Score: 107 bits (268), Expect = 1.810e-25
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 2
Query: 119 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKESKES 355
M D D +AT EEM A++P+A+RDSCAH+L+PLNKCRR+T Y PW+C+ ERH YEKCQYL+FK R A M E ++S
Sbjct: 1 MASDTDPEPRRATREEMRDARLPLAYRDSCAHILIPLNKCRRATWYAPWKCTDERHSYEKCQYLEFKKRVAKMDELRKS 79
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
A0A517LK83_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Venturia effusa TaxID=50376 RepID=A0A517LK83_9PEZI)
HSP 1 Score: 107 bits (268), Expect = 2.790e-25
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 2
Query: 119 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKE 343
+G HD G AT E+M AA++PMA+RDSCAHLL+PLN+CR++ YLPW+C +ERH YEKCQY +FK R A M E
Sbjct: 13 LGHGHDTPTGPATSEQMSAARLPMAYRDSCAHLLIPLNRCRQAEYYLPWKCENERHTYEKCQYEEFKKRVAKMDE 87
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
A0A6A6UGI8_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6UGI8_9PEZI)
HSP 1 Score: 107 bits (267), Expect = 3.890e-25
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 2
Query: 119 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKE 343
+G H+ +G AT EEM AA++P+A+RDSCAHLL+PLNKCR+ YLPW+C HERH YE CQY +FK R M E
Sbjct: 13 LGHGHEDPKGPATREEMTAARLPLAYRDSCAHLLIPLNKCRQKEWYLPWKCDHERHSYEGCQYAEFKKRVKKMDE 87
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
A0A0W7VSI5_9HYPO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=6 Tax=Trichoderma TaxID=5543 RepID=A0A0W7VSI5_9HYPO)
HSP 1 Score: 106 bits (265), Expect = 4.930e-25
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 2
Query: 149 KATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKESKES 355
+AT EEM AK+P+A+RDSCAHLL+PLNKCRR T Y PW+C+ ERH YEKCQY++FK R A M E +ES
Sbjct: 11 QATREEMRDAKLPLAYRDSCAHLLIPLNKCRRETWYAPWKCTDERHSYEKCQYVEFKKRVAKMNELRES 79
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
G9MJU7_HYPVG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=6 Tax=Hypocreales TaxID=5125 RepID=G9MJU7_HYPVG)
HSP 1 Score: 106 bits (265), Expect = 4.930e-25
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 2
Query: 143 EGK-ATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKESKES 355
EG+ AT EEM A++P+A+RDSCAHLL+PLNKCRR T Y PW+CS ERH YEKCQY++FK R A M E +ES
Sbjct: 8 EGRQATREEMRDARLPLAYRDSCAHLLIPLNKCRRETWYAPWKCSDERHSYEKCQYVEFKKRVAKMNELRES 79
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
A0A420YNW9_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Coniochaeta pulveracea TaxID=177199 RepID=A0A420YNW9_9PEZI)
HSP 1 Score: 106 bits (265), Expect = 5.070e-25
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 2
Query: 149 KATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKESKES 355
+AT EEM AAK+P+A+RDSCAHLL+PLN+CR T YLPW+C ERH YEKCQY++FK R A M E +ES
Sbjct: 12 QATREEMSAAKVPLAYRDSCAHLLIPLNRCRYETYYLPWKCEDERHTYEKCQYVEFKKRVAKMDELRES 80
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Match:
A0A0A1T2W2_9HYPO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Torrubiella hemipterigena TaxID=1531966 RepID=A0A0A1T2W2_9HYPO)
HSP 1 Score: 105 bits (262), Expect = 1.340e-24
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 2
Query: 119 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKDRKAMMKESKES 355
MG D +AT EEM A++P+A+RDSCAHLL+PLN+CR+ T Y PW+C ERH YEKCQY++FK R A M E +ES
Sbjct: 1 MGSDTTSDARQATREEMRDARLPLAYRDSCAHLLIPLNQCRKETWYAPWKCEDERHSYEKCQYVEFKKRVAKMNELRES 79
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig102.184.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.20e-49 / Id = 98.73 Expect = 4.76e-26 / Id = 63.29 Expect = 1.30e-25 / Id = 62.67 Expect = 1.81e-25 / Id = 59.49 Expect = 2.79e-25 / Id = 61.33 Expect = 3.89e-25 / Id = 60.00 Expect = 4.93e-25 / Id = 66.67 Expect = 4.93e-25 / Id = 66.67 Expect = 5.07e-25 / Id = 66.67 Expect = 1.34e-24 / Id = 58.23 Sequence D7FZ56_ECTSI I1S5X9_GIBZE A0A6A6PDY7_9PEZI A0A8H4LWB4_9HYPO A0A517LK83_9PEZI A0A6A6UGI8_9PEZI A0A0W7VSI5_9HYPO G9MJU7_HYPVG A0A420YNW9_9PEZI A0A0A1T2W2_9HYPO Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 240 Model size 1110 Exons 3 Ec32 ortholog Ec-02_006350.1 Ec32 ortholog description NADH:ubiquinone oxidoreductase, B18 subunit Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko00002,ko01000,ko03000,ko03029,ko03036 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. BK EC 2.3.1.48 EggNOG OGs KOG3468@1,KOG3468@2759 EggNOG free text desc. NADH dehydrogenase (quinone) activity GOs GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005758,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009853,GO:0009987,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042773,GO:0042775,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 KEGG Module M00147 KEGG Pathway ko00190,ko01100,ko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04714,ko04720,ko04723,ko04916,ko04919,ko04922,ko04932,ko05010,ko05012,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map00190,map01100,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04714,map04720,map04723,map04916,map04919,map04922,map04932,map05010,map05012,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215 KEGG TC 3.D.1.6 KEGG ko ko:K03963,ko:K04498 Preferred name NDUFB7 Seed eggNOG ortholog 2880.D7FZ56 Seed ortholog evalue 1.1e-39 Seed ortholog score 168.7 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig102.184.1
>prot_E-siliculosus-1a_F_contig102.184.1 ID=prot_E-siliculosus-1a_F_contig102.184.1|Name=mRNA_E-siliculosus-1a_F_contig102.184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=80bp
MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQ back to top mRNA from alignment at E-siliculosus-1a_F_contig102:3183..5835-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig102.184.1 ID=mRNA_E-siliculosus-1a_F_contig102.184.1|Name=mRNA_E-siliculosus-1a_F_contig102.184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2653bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:3183..5835- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GTGTCGCTACAGCACAGCAGGAGTCGTTGGTCGTCTGTGTGGAGTGTGGA
GTCTCGAGTCACACCAAATAAGCAAGGGCTGCGATCAGGGG GTGAGTGCA
GAAACAGCAGTTCCGTTGTTACTTGCTTTCGGGGTCAAGAGGAAATGTAG
AGGAGAGAGCGGTGATGCATAGCTTGGGATAATCGCTGCTTGCCGATCGA
AAACATACAACAACATCGTTTCGTGTCATAGATGCAACCTCGTACCCGCC
GTGCCTGTGGATGGCGCAGCTTCGAGTGTGTGGGGCCCGAACTCCAAGCC
ACACCGCTACAACTTGTGCAGGAGTGTTGGTATATCGTTTTAAGACGCTT
GCGTGAGGTATTGACAATCGGGTACAAGCCGTAGTCGGTGGGTTGCTTAC
AGCAGTAGGTGCGGCGGAATCGCGGGATGATGATGATATGATGATGATGT
CTTGACTTCCGCCGCAGGGCGATGTACTGATGTACTTGCTGCTTGCGACG
GGGATGTAAGGCAGGGAGTGAGGAACAAGGAGCTACAACTCAAGCATCGA
ATGGGAGCAATGTGCAGGGTGTATGTCGATCAGGCTGTTTGCCTGGCTGG
TTTTGGTACAACAGCTGTGCTGTGGTCTGATGATGCTAAACGAGTAGAAG
TACTGAGCACACCAGCCGCGGTCGGCAAGGCACAAGACACTGCTGAGCTG
GTGGGGTGTAGTGTACCTTACAGTGAACGGAATCCCCTGTTTGACAACCG
CTGCCACTTGTGCCCCACTCCACTGCAATATGAGCGAGCGAGCCATGTGC
AGCACCACTCCAGGATGTTGTTGCTGTGGCTTCGAACCTGAAATCATCCC
ATCTGCCGCCCCCCTGCTGCGGAATCTGCCTGCCGTGGTAGGGCAACTGC
TGTCGCCTCTGCCGTTGATTGCGAACCTGCCCGCGACCGTTATGCCGAGG
GAAGCTTGTTTTAACACCGACCGGTTGTTTTTTGTTCCCGACGAATGAAC
TGAATGTTCGCACAGACACGATTGTTGCTATTATTAAGCACG ATGGGAGG
TGACCACGACGGCATGGAGGGCAAGGCCACCGAGGAGGAGATGGTTGCGG
CTAAGATGCCCATGGCCTTCCGGGACTCGTGCGCCCACCTGCTGCTGCCC
CTCAACAAGTGCAGGAGATCCACCATGTACTTGCCATGGCAGTGCTCGCA
CGAGCGTCACATCTACGAGAAGTGCCAGTATCTCGA GTGAGTCAGGGTTG
CGACGATTGTGTCCTTCTTTCCCAGTTAATGCGCCCGTGTCCGTGATTTG
GGGGCTGTTTGGGCGGTGCCGTTGTCCCTCCTTGGCCCACCGCTGTTCGT
TCGCATGCACAAGTAGACTCAGGTTGGTTACCTGCTCAAGTTGACGCTTG
GCCACTGGCAACATGCAGCCCTTATCAAGAACGTTACATGTAGTGTGATT
GTGCCTCTTTCTCCCCCGGCTTGGAAGACCGTTGAAACTTGTCGTACTGC
TGTAGGTCCATTGCAAACGTCTTGTGCCCTTTGGCAAAGGAGTCAGTGCA
TTCGAAGCAGTTCAGTGGCCCAAGGGGCGATTGCCTCTCACCTGTGGCAC
GTGCCAATGATGCGGTGGCCCTTAAACCTCAAGGCATTTTGTTTGCTCCC
GACAACTGAAGCTCGAAAAGTCGACTCCGAGACGCGGTCTTGTTTGCTTT
TCCCTTTCTGCCGTAGCAAACGCCTGTCGCTGCTGCTACTTTCGACAAAA
TCCGAAGCGATATGGCTGATGCGAAGCTAACATTGCCCCCCTCACTGCCT
TCGACGCCCCCCGTGCCTTTCCCCTCAAATGTCTTGACGGTCCTCCCGGT
TTTAGCTTTAAGGATAGGAAAGCGATGATGAAGGAGAGCAAAGAGTCGTG
A TAGCCGCCACTGCCATTGCCCTTGGGAGGGAACACGTAGGCATTCGGCG
CTTGCGTTTGGGGACGATTTTTTTATAGGGCATTGGGGCTTGGGTTTGGT
TCAGGGTACTGCTGCTGCTGTGAAACACTTGGGCGGGCGGCTGTAGCGAG
GCCATAAAGTCGGGGACGGGATGGCATGGGAGGGATGCCTTGAGGCCTCC
CCTCCGCACTCCGTCCGGCAATGAAGCGCTGCGCCTGCCGCGTTGTAAAG
CAGCGGTCAGTGCAGGCAACTGCTCATGTAGGCTGTCACTACAATGGAAA
GCATTTTCGGCGGAGGAGTGTTGAGCATTTAGTGCATCAAGTGGCTACGT
AAGCGGTGGAGTGGGCTCTTTCGCATTGAGTGATTGGTATTGGTGTTGGT
GAGCTGAGCGAGCAACAAGGAAGATGCCGAGAGAGACCAGGCCACGCTTG
CTTGGACGATTCTCCGAAGAGGGGGAGAGGATTGACTCTGCGGCGCCGCC
TTCCTATTGCTATAAATAGGATTCCGCCGTCTTTTTTTGGTCCACAGCAT
TGCGTCGCCGTTGCATCGTGGATTCTTCCTACATAGGCATTTGACCAATA
CCAGCAGCTTTCGGCCACCAAACTCAGCGGGGCAACACTATGCCAACGTC
CGCTGGGATGGAATCGTTCAAGGAATTGTCTATGCACGCAGCAGACAACG
ACATATGGTCTACACCATGTACGTTTGTACCGAGAGTGGCGATTGAGGAG
ACG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig102:3183..5835-
>mRNA_E-siliculosus-1a_F_contig102.184.1 ID=mRNA_E-siliculosus-1a_F_contig102.184.1|Name=mRNA_E-siliculosus-1a_F_contig102.184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=480bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:3183..5835- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top