mRNA_E-siliculosus-1a_F_contig130.1834.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig130.1834.1
Unique NamemRNA_E-siliculosus-1a_F_contig130.1834.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: D7G8Q4_ECTSI (Adenosylhomocysteinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q4_ECTSI)

HSP 1 Score: 951 bits (2457), Expect = 0.000e+0
Identity = 475/479 (99.16%), Postives = 477/479 (99.58%), Query Frame = 3 
Query:   66 MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQLEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQLEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAV+CGYGDVGKGCAQAMKAAGA+VYVTEVDPICALQAAMEGFRVVKLDTVV TGDIFITTTGNKGIIMA DMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY
Sbjct:    1 MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQLEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVVCGYGDVGKGCAQAMKAAGAIVYVTEVDPICALQAAMEGFRVVKLDTVVKTGDIFITTTGNKGIIMATDMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 479
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A835ZH87_9STRA (Adenosylhomocysteinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH87_9STRA)

HSP 1 Score: 805 bits (2079), Expect = 3.910e-286
Identity = 398/482 (82.57%), Postives = 439/482 (91.08%), Query Frame = 3 
Query:   66 MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFP---GQLEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            MS+GDYRVADISLADFGRREI++AEHEMPGLMSCREE+    G L+G+R++GSLHMTIQTAVLIETLK+L  DIRWCSCNIFSTQDHAAAAIARD SAAVFAWKGESLEEYWECTLSA+TWPE D KG GPD+IVDDGGDMTLLIHEGFKAE AY KDGTLPDP S  DNAEF+IVLT+I RELP  P+KW ++A RC GVSEETTTGVHRLY ME  ++LLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKA GA+VYVTEVDPICALQAAMEGFRVV++++VV  GDIFITTTGNKGII  A M++MKNNAIVGNIGHFDNEI++  L+A T ++NIKPQVD+F++ DGH +I+LAEGRLLNLGCATGHPSFVMSASFTNQTLAQ+ELW+E+ESGKYARG VYVLPK+LDEKVARLHL SL VELTELS+EQADYI VK  GP+KPDTYRY
Sbjct:    1 MSQGDYRVADISLADFGRREIELAEHEMPGLMSCREEYGSDGGCLKGSRIAGSLHMTIQTAVLIETLKSLGGDIRWCSCNIFSTQDHAAAAIARDGSAAVFAWKGESLEEYWECTLSAITWPEDDGKGDGPDLIVDDGGDMTLLIHEGFKAEAAYAKDGTLPDPTST-DNAEFKIVLTLIARELPGNPQKWTKVAQRCFGVSEETTTGVHRLYQMEAAKTLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAGGAIVYVTEVDPICALQAAMEGFRVVRMESVVARGDIFITTTGNKGIITEAYMSQMKNNAIVGNIGHFDNEIEMEQLMAATTRVNIKPQVDRFVYPDGHGVIVLAEGRLLNLGCATGHPSFVMSASFTNQTLAQIELWRERESGKYARGKVYVLPKVLDEKVARLHLASLGVELTELSSEQADYIGVKVSGPYKPDTYRY 481
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A7S2Y3Q8_9STRA (Adenosylhomocysteinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3Q8_9STRA)

HSP 1 Score: 794 bits (2051), Expect = 6.690e-282
Identity = 395/481 (82.12%), Postives = 433/481 (90.02%), Query Frame = 3 
Query:   66 MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEF--PGQLEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            MS GDYRV DISLADFGR+EI++AE EMPGLMS REE+   G L GAR+SGSLHMTIQTAVLIETLKA+ +D+RWCSCNIFSTQDHAAAAIARD SAAVFAWKGE+LEEYWECTLSAL WPE D KG GPDIIVDDGGDMTLLIHEG+KAENAYEKDGTLPDPES   NAE +IVL IIKRELPK P+ WH+ A RC+GVSEETTTGVHRLYMMEKD +LLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVM+AGKS V+CGYGDVGKGCA AM+A GAVV++TE+DPICALQAAMEGFRVV+L++VVG  DIFITTTGNK II+A  M KMKNNAIV NIGHFDNEID+AGL+A T ++NIKPQVDKF+F DG A+I+LAEGRL+NLGCATGHPSFVMS SFTNQTLAQ+ELWKEKE+GKYARG VYVLPK+LDEKVARLHL +L VELTELS EQADYI V   GP+KPDTYRY
Sbjct:    1 MSMGDYRVKDISLADFGRKEIELAEVEMPGLMSSREEYGPQGALAGARISGSLHMTIQTAVLIETLKAIGADLRWCSCNIFSTQDHAAAAIARDGSAAVFAWKGETLEEYWECTLSALFWPEDDGKGKGPDIIVDDGGDMTLLIHEGYKAENAYEKDGTLPDPEST-TNAELKIVLGIIKRELPKDPKMWHKTAERCMGVSEETTTGVHRLYMMEKDNTLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMVAGKSVVVCGYGDVGKGCAFAMRAQGAVVHITEIDPICALQAAMEGFRVVRLESVVGKADIFITTTGNKDIIVADSMEKMKNNAIVCNIGHFDNEIDMAGLMARTTRVNIKPQVDKFVFADGKAVIILAEGRLMNLGCATGHPSFVMSNSFTNQTLAQIELWKEKETGKYARGKVYVLPKVLDEKVARLHLGALGVELTELSKEQADYIGVSVSGPYKPDTYRY 480
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A7S1Y144_9STRA (Adenosylhomocysteinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y144_9STRA)

HSP 1 Score: 787 bits (2032), Expect = 4.920e-279
Identity = 386/475 (81.26%), Postives = 426/475 (89.68%), Query Frame = 3 
Query:   78 DYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQLEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            DYRVADISLADFGR+EID+AEHEMPGLM+CREE+P  L GARV+GSLHMTIQTAVLIETLK+L  D+RWCSCNIFSTQDHAAAAIARD SAAVFAWKGE+LEEYW+CTL A TWPE D KG GPDIIVDDGGDMTLLIHEG+KAE AY KDGTLPDP+S  DNAEF+IVL+IIKR LP+ P++WH+ A R VGVSEETTTGVHRLY MEK   LLFPAINVNDSVTKSKFDNLYGCKHSLPDG+ RATDVM+AGKS V+ G+GDVGKGCAQA+KAAG++VYVTE+DPICALQAAMEGFRVV+LDTV+GT DIFITTTGNKGII    M+KMKNNAIVGNIGHFDNEID+ GL+A T++LNIKPQVDKF++ DGH +I+LAEGRLLNLGCATGHPSFVMS SFTNQTLAQ+ELW E+ESGKY  GHVYVLPK LDEKVARLHL SL VELTELS EQADYI+V   GP+KP  YRY
Sbjct:    6 DYRVADISLADFGRKEIDLAEHEMPGLMACREEYPNALAGARVAGSLHMTIQTAVLIETLKSLGGDMRWCSCNIFSTQDHAAAAIARDNSAAVFAWKGETLEEYWDCTLKACTWPEDDGKGLGPDIIVDDGGDMTLLIHEGYKAEEAYAKDGTLPDPDST-DNAEFKIVLSIIKRLLPEDPQRWHKYAERLVGVSEETTTGVHRLYQMEKKGELLFPAINVNDSVTKSKFDNLYGCKHSLPDGIMRATDVMLAGKSCVVAGFGDVGKGCAQALKAAGSIVYVTEIDPICALQAAMEGFRVVRLDTVLGTADIFITTTGNKGIITNEHMSKMKNNAIVGNIGHFDNEIDMEGLMAATERLNIKPQVDKFVYPDGHGVIVLAEGRLLNLGCATGHPSFVMSNSFTNQTLAQIELWTERESGKYETGHVYVLPKELDEKVARLHLASLGVELTELSQEQADYINVPVGGPYKPAAYRY 479
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: W7T232_9STRA (Adenosylhomocysteinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T232_9STRA)

HSP 1 Score: 766 bits (1979), Expect = 2.580e-269
Identity = 377/467 (80.73%), Postives = 422/467 (90.36%), Query Frame = 3 
Query:   66 MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQ-LEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISV 1463
            MS GDYRVADISLADFGR+EI +AE EMPGLM+CREE+    L+GAR++GSLHMTIQTAVLIETLKA+  DIRWCSCNIFSTQDHAAAA+ARDESAAVFAWKGESLEEYWECT++A+TWP  D KG GPD+IVDDGGDMTLL+HEG+KAE  Y KDGTLPDP S  DNAEF+IVL +I RELPKTP+KWH++AAR  GVSEETTTGVHRLY+MEK+++LLFPAINVNDSVTKSKFDNLYGCKHSLPDG+ RATDVM+AGK  VICG+GDVGKGCAQAMKAAG++VYVTEVDPICALQA+MEGFRVV+L +V+   DI ITTTGNKGIIMA DMAKMKNNAIVGNIGHFDNEID+ G++   K+ NIKPQVD+F+F DGH +I+LAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKE+ SGKYA G VYVLPK+LDEKVARLHL SL VELTELSTEQA+YI +
Sbjct:   25 MSMGDYRVADISLADFGRKEIQLAEVEMPGLMACREEYGADALKGARIAGSLHMTIQTAVLIETLKAMGGDIRWCSCNIFSTQDHAAAAVARDESAAVFAWKGESLEEYWECTMNAITWPTDDGKGDGPDLIVDDGGDMTLLVHEGYKAEELYAKDGTLPDPAST-DNAEFKIVLALIARELPKTPQKWHKVAARMYGVSEETTTGVHRLYLMEKNKTLLFPAINVNDSVTKSKFDNLYGCKHSLPDGIMRATDVMLAGKRVVICGFGDVGKGCAQAMKAAGSIVYVTEVDPICALQASMEGFRVVRLSSVIADIDIVITTTGNKGIIMAEDMAKMKNNAIVGNIGHFDNEIDMDGVMKVAKRENIKPQVDRFVFPDGHGVIVLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKERTSGKYATGKVYVLPKVLDEKVARLHLASLGVELTELSTEQAEYIGI 490
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A4D9CME1_9STRA (Multifunctional fusion protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CME1_9STRA)

HSP 1 Score: 771 bits (1992), Expect = 4.280e-267
Identity = 378/474 (79.75%), Postives = 425/474 (89.66%), Query Frame = 3 
Query:   84 RVADISLADFGRREIDIAEHEMPGLMSCREEFPGQ-LEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            R  DISLADFGR+EI +AE EMPGLM+CREE+    L+GAR++GSLHMTIQTAVLIETLKA+  DIRWCSCNIFSTQDHAAAA+ARDESAAVFAWKGESLEEYWECT++A+TWP  D KG GPD+IVDDGGDMTLL+HEG+KAE  Y KDGTLPDP S  DNAEF+IVL +I RELPKTP+KWH++AAR  GVSEETTTGVHRLY+MEK+++LLFPAINVNDSVTKSKFDNLYGCKHSLPDG+ RATDVM+AGK  VICG+GDVGKGCAQAMKAAG++VYVTEVDPICALQA+MEGFRVV+L +V+   DI ITTTGNKGIIMA DMAKMKNNAIVGNIGHFDNEID+ G++   K+ NIKPQVD+F+F DGH +I+LAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKE+ SGKYARG VYVLPK+LDEKVARLHL SL VELT+LS+EQA+YI V   GPFKP+ YRY
Sbjct:  387 RQRDISLADFGRKEIQLAEVEMPGLMACREEYGADALKGARIAGSLHMTIQTAVLIETLKAMGGDIRWCSCNIFSTQDHAAAAVARDESAAVFAWKGESLEEYWECTMNAITWPTDDGKGDGPDLIVDDGGDMTLLVHEGYKAEELYAKDGTLPDPTST-DNAEFKIVLALIARELPKTPQKWHKVAARMYGVSEETTTGVHRLYLMEKNKTLLFPAINVNDSVTKSKFDNLYGCKHSLPDGIMRATDVMLAGKRVVICGFGDVGKGCAQAMKAAGSIVYVTEVDPICALQASMEGFRVVRLSSVIAEIDIVITTTGNKGIIMAEDMAKMKNNAIVGNIGHFDNEIDMDGVMKVAKRENIKPQVDRFVFPDGHGVIVLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKERTSGKYARGKVYVLPKVLDEKVARLHLASLGVELTDLSSEQAEYIGVSVSGPFKPEAYRY 859
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A024GTM6_9STRA (Adenosylhomocysteinase n=2 Tax=Albugo TaxID=65356 RepID=A0A024GTM6_9STRA)

HSP 1 Score: 752 bits (1942), Expect = 2.370e-265
Identity = 374/483 (77.43%), Postives = 422/483 (87.37%), Query Frame = 3 
Query:   60 VTMSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQ--LEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            +T +E DYRVADISLAD+GR+EI+IA+ EMPGLM CR+EF  Q  L  AR++GSLHMTIQTAVLIETLKAL  ++RWCSCNIFSTQDHAAAAIARD SAAVFAWKGESLEEYWECTL+A+TWP  D KG GPD+IVDDGGDMTLLIHEG+ AE A+ ++GTLPDP S  DNAE + V  II++ L K P+KWH++AARC GVSEETTTGVHRLY MEK  +LLFPAINVNDSVTKSKFDNLYGC+HSLPDG+ RATDVM+AGK  VICG+GDVGKG AQAMKAAGA+V+VTEVDPICALQA MEGF+VV+L TVV T DIFITTTGNK IIMAADMAKMKNNAIVGNIGHFDNEID+AG++ TT++ NIKPQVD+F+F DGH +I+LAEGRLLNLGCATGHPSFVMS SFTNQTLAQ+ELWKEK+S KY  G VYVLPK LDEKVARLHL +L  ELTEL+ +QADYI V   GPFKP+TYRY
Sbjct:    1 MTATE-DYRVADISLADYGRKEIEIAQIEMPGLMKCRQEFGEQQPLSNARIAGSLHMTIQTAVLIETLKALGGNLRWCSCNIFSTQDHAAAAIARDASAAVFAWKGESLEEYWECTLNAITWPTDDGKGDGPDLIVDDGGDMTLLIHEGYLAERAFAENGTLPDPAST-DNAEMKCVFNIIRQTLKKDPKKWHKVAARCKGVSEETTTGVHRLYQMEKSGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGIMRATDVMLAGKRIVICGFGDVGKGSAQAMKAAGAIVFVTEVDPICALQACMEGFQVVRLSTVVSTADIFITTTGNKDIIMAADMAKMKNNAIVGNIGHFDNEIDMAGVLNTTRRYNIKPQVDRFVFPDGHGVIILAEGRLLNLGCATGHPSFVMSNSFTNQTLAQIELWKEKDSNKYQVGKVYVLPKELDEKVARLHLSNLGAELTELTCDQADYIGVNIAGPFKPETYRY 481
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A024TZX4_9STRA (Adenosylhomocysteinase n=14 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZX4_9STRA)

HSP 1 Score: 752 bits (1941), Expect = 3.370e-265
Identity = 380/480 (79.17%), Postives = 418/480 (87.08%), Query Frame = 3 
Query:   69 SEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEF-PGQ-LEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            S GDYRVADISLADFGR+EI+IA+ EMPGLM   +EF P Q L+GAR+ GSLHMTIQTAVLIETLKAL  DIRWCSCNIFSTQDHAAAAIARD SAAVFAWKGE+LEEYWECTL+A+TWPE D KG GPDIIVDDGGD+TLLIHEG+KAE  + +DGTLPDP S  DNAEF+ VL +I+R L   P KW ++A RC GVSEETTTGVHRLY MEK +SLLFPAINVNDSVTKSKFDNLYGC+HSLPDG+ RATDVM+AGK AVICG+GDVGKG AQAMKAAGA+VYVTE+DPICALQAAM+GF VV+L+TVV   DIFITTTGNK IIM   MAKMKNNAIVGNIGHFDNEID+ GLV  TK+ NIKPQVD+F+F DGH II+LAEGRLLNLGCATGHPSFVMS SFTNQTLAQ+ELW EK+SGKY  G VYVLPK LDEKVARLHL +L VELT LS EQADYISV  EGP+KP+TYRY
Sbjct:    3 SMGDYRVADISLADFGRKEIEIAQIEMPGLMQSIQEFGPSQPLKGARIVGSLHMTIQTAVLIETLKALGGDIRWCSCNIFSTQDHAAAAIARDGSAAVFAWKGETLEEYWECTLNAVTWPEDDGKGDGPDIIVDDGGDVTLLIHEGYKAEQKFAQDGTLPDPAST-DNAEFKCVLGLIRRTLQTDPTKWTKIAKRCKGVSEETTTGVHRLYQMEKSKSLLFPAINVNDSVTKSKFDNLYGCRHSLPDGIMRATDVMLAGKRAVICGFGDVGKGSAQAMKAAGAIVYVTEIDPICALQAAMDGFIVVRLETVVSIADIFITTTGNKDIIMTEHMAKMKNNAIVGNIGHFDNEIDMLGLVKATKRQNIKPQVDRFVFPDGHGIIMLAEGRLLNLGCATGHPSFVMSNSFTNQTLAQIELWTEKDSGKYQSGKVYVLPKQLDEKVARLHLANLGVELTVLSKEQADYISVPVEGPYKPETYRY 481
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A6S8EXE2_9STRA (Adenosylhomocysteinase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8EXE2_9STRA)

HSP 1 Score: 751 bits (1940), Expect = 4.600e-265
Identity = 377/481 (78.38%), Postives = 416/481 (86.49%), Query Frame = 3 
Query:   66 MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQ--LEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            M++GDYRVADISLADFGRREI +AE+EMPGLM   EEF     L GAR++GSLHMTIQTAVLIETLK L +++RWCSCNIFSTQDHAAAAIARDESAAVFAWKGE+LEEYWECTL+A+TW   D+KG GPD+IVDDGGDMTLL+HEG+KAE AY KDGTLPDP S  DNAEF+IVLTIIKRELPK P KWH++AAR  GVSEETTTGVHRLY M     LLFPAINVNDSVTKSKFDNLYGCKHSLPDG+CRATDVM+AGK AVICGYGDVGKGCA AMKAAG +V VTEVDPICALQAAMEGF V  L++ +   DI ITTTGNKGII    M+KM++NAIVGNIGHFDNEID+ GL+  T ++NIKPQVDKFIF +G   I+LAEGRLLNLGCATGHPSFVMS SFTNQTLAQLELWKE+ SGKYA+G VYVLPK+LDEKVA LHL SL+V+LT LS EQADYI V K GPFKPDTYRY
Sbjct:    1 MAQGDYRVADISLADFGRREISLAEYEMPGLMKTVEEFGASQPLAGARIAGSLHMTIQTAVLIETLKKLGANVRWCSCNIFSTQDHAAAAIARDESAAVFAWKGETLEEYWECTLNAITWTNPDEKGDGPDLIVDDGGDMTLLVHEGYKAEEAYAKDGTLPDPNST-DNAEFKIVLTIIKRELPKQPDKWHKVAARMFGVSEETTTGVHRLYAMSTAGELLFPAINVNDSVTKSKFDNLYGCKHSLPDGICRATDVMLAGKRAVICGYGDVGKGCAFAMKAAGCIVTVTEVDPICALQAAMEGFAVKTLESQLADLDIVITTTGNKGIITCDSMSKMRDNAIVGNIGHFDNEIDMDGLMKATTRMNIKPQVDKFIFPNGMGPIVLAEGRLLNLGCATGHPSFVMSNSFTNQTLAQLELWKERNSGKYAKGKVYVLPKILDEKVASLHLASLKVDLTVLSDEQADYIGVAKTGPFKPDTYRY 480
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Match: A0A7S2HB52_9STRA (Adenosylhomocysteinase n=6 Tax=Stramenopiles TaxID=33634 RepID=A0A7S2HB52_9STRA)

HSP 1 Score: 749 bits (1935), Expect = 2.730e-264
Identity = 375/482 (77.80%), Postives = 422/482 (87.55%), Query Frame = 3 
Query:   66 MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQ--LEGARVSGSLHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAENAYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPR-KWHELAARCVGVSEETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCRATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 1502
            MS GDY+VADISLAD+GR+EI++AE EMPGLM+CR+E+     L+GAR+SGSLHMT+QTAVLIETLKAL  DIRWCSCNIFSTQDHAAAAIA+ ESAAVFAWKGESLEEYWECTL+A+TWP+ D KG G DIIVDDGGDMTLLIHEG KAE+ + KDGTLPDPES  +NAEF+IVL+IIKR L      KW+++A RC+GVSEETTTGVHRLY MEK E+LLFPAINVNDSVTKSKFDNLYGCKHSLPDG+ RATDVM+AGK AVICGYGDVGKGCA AM+A G VVYVTE+DPICALQA MEG+ V  L+ VVG  DIFITTTGNKGI+MA  M+KMKNNAIVGNIGHFDNEID+ GL+  TK++NIKPQVDKF+F+ G  +I+LAEGRLLNLGCATGHPSFVMSASFTNQTLAQ+ELW EK+SGKYARG VYVLPK LDEKVARLHL SL  +LT LS EQ+DYI +  EGP+KPDTYRY
Sbjct:    1 MSTGDYKVADISLADYGRKEIEMAEVEMPGLMACRDEYGSDQPLKGARISGSLHMTVQTAVLIETLKALGGDIRWCSCNIFSTQDHAAAAIAQQESAAVFAWKGESLEEYWECTLNAVTWPDDDGKGHGMDIIVDDGGDMTLLIHEGKKAEDQFLKDGTLPDPEST-ENAEFKIVLSIIKRLLEAGETDKWNKIATRCMGVSEETTTGVHRLYTMEKTETLLFPAINVNDSVTKSKFDNLYGCKHSLPDGIMRATDVMMAGKKAVICGYGDVGKGCAAAMRANGCVVYVTEIDPICALQACMEGYTVTTLEEVVGFADIFITTTGNKGILMADTMSKMKNNAIVGNIGHFDNEIDMDGLMKITKRINIKPQVDKFVFESGSGVIVLAEGRLLNLGCATGHPSFVMSASFTNQTLAQIELWVEKDSGKYARGKVYVLPKALDEKVARLHLDSLGAKLTVLSKEQSDYIGIPIEGPYKPDTYRY 481
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig130.1834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q4_ECTSI0.000e+099.16Adenosylhomocysteinase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835ZH87_9STRA3.910e-28682.57Adenosylhomocysteinase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2Y3Q8_9STRA6.690e-28282.12Adenosylhomocysteinase n=1 Tax=Fibrocapsa japonica... [more]
A0A7S1Y144_9STRA4.920e-27981.26Adenosylhomocysteinase n=1 Tax=Phaeomonas parva Ta... [more]
W7T232_9STRA2.580e-26980.73Adenosylhomocysteinase n=1 Tax=Nannochloropsis gad... [more]
A0A4D9CME1_9STRA4.280e-26779.75Multifunctional fusion protein n=1 Tax=Nannochloro... [more]
A0A024GTM6_9STRA2.370e-26577.43Adenosylhomocysteinase n=2 Tax=Albugo TaxID=65356 ... [more]
A0A024TZX4_9STRA3.370e-26579.17Adenosylhomocysteinase n=14 Tax=Saprolegniaceae Ta... [more]
A0A6S8EXE2_9STRA4.600e-26578.38Adenosylhomocysteinase n=1 Tax=Aureoumbra lagunens... [more]
A0A7S2HB52_9STRA2.730e-26477.80Adenosylhomocysteinase n=6 Tax=Stramenopiles TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig130contigE-siliculosus-1a_F_contig130:66193..70015 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1440
Model size2496
Exons3
Ec32 orthologEc-22_002610.1
Ec32 ortholog descriptionS-Adenosyl homocysteine hydrolase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
BiGG ReactioniRC1080.CRv4_Au5_s3_g11226_t1
CAZyCE10
COG Functional cat.H
EC3.1.1.1,3.1.1.56,3.1.1.84,3.3.1.1
EggNOG OGsCOG0499@1,KOG1370@2759
EggNOG free text desc.adenosylhomocysteinase activity
GOsGO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002028,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006082,GO:0006139,GO:0006152,GO:0006378,GO:0006396,GO:0006397,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006611,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006644,GO:0006650,GO:0006656,GO:0006725,GO:0006732,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007154,GO:0007163,GO:0007165,GO:0007186,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0008652,GO:0008654,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010467,GO:0010468,GO:0010765,GO:0010959,GO:0012505,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016053,GO:0016054,GO:0016070,GO:0016071,GO:0016259,GO:0016324,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019219,GO:0019222,GO:0019439,GO:0019510,GO:0019637,GO:0019752,GO:0022898,GO:0023051,GO:0023052,GO:0030551,GO:0030552,GO:0030554,GO:0031002,GO:0031012,GO:0031123,GO:0031124,GO:0031323,GO:0031440,GO:0031667,GO:0031984,GO:0032259,GO:0032409,GO:0032412,GO:0032432,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0032879,GO:0033036,GO:0033353,GO:0034613,GO:0034641,GO:0034655,GO:0034656,GO:0034762,GO:0034765,GO:0036094,GO:0036293,GO:0038166,GO:0042044,GO:0042045,GO:0042175,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043270,GO:0043434,GO:0043436,GO:0043621,GO:0043631,GO:0044057,GO:0044070,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045017,GO:0045177,GO:0045184,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046470,GO:0046474,GO:0046483,GO:0046486,GO:0046498,GO:0046500,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048037,GO:0048511,GO:0048512,GO:0048518,GO:0050662,GO:0050667,GO:0050684,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051239,GO:0051252,GO:0051287,GO:0051592,GO:0051641,GO:0051649,GO:0051716,GO:0055086,GO:0060255,GO:0062039,GO:0062040,GO:0065007,GO:0065009,GO:0070482,GO:0070633,GO:0070727,GO:0070887,GO:0071268,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072521,GO:0072523,GO:0080090,GO:0090304,GO:0090407,GO:0097159,GO:0097164,GO:0097367,GO:0097458,GO:0098590,GO:0098604,GO:0098827,GO:0099568,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901652,GO:1901653,GO:1901657,GO:1901658,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903311,GO:1903522,GO:1903779,GO:1904385,GO:1990776
KEGG ModuleM00035
KEGG Pathwayko00270,ko00983,ko01100,map00270,map00983,map01100
KEGG ReactionR00192,R04936,R08220,R08255,R08258
KEGG koko:K01251,ko:K03927
KEGG rclassRC00041,RC00056,RC00069,RC00475,RC00476,RC01161,RC01243,RC02264
Preferred nameAHCYL1
Seed eggNOG ortholog2880.D7G8Q4
Seed ortholog evalue1.4e-275
Seed ortholog score954.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig130.1834.1prot_E-siliculosus-1a_F_contig130.1834.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig130 66258..69024 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927824.4304364-UTR-E-siliculosus-1a_F_contig130:66192..662571622927824.4304364-UTR-E-siliculosus-1a_F_contig130:66192..66257Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig130 66193..66257 +
1696318695.6888514-UTR-E-siliculosus-1a_F_contig130:66192..662571696318695.6888514-UTR-E-siliculosus-1a_F_contig130:66192..66257Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig130 66193..66257 +
1622927824.4853096-UTR-E-siliculosus-1a_F_contig130:69024..700151622927824.4853096-UTR-E-siliculosus-1a_F_contig130:69024..70015Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig130 69025..70015 +
1696318695.7334702-UTR-E-siliculosus-1a_F_contig130:69024..700151696318695.7334702-UTR-E-siliculosus-1a_F_contig130:69024..70015Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig130 69025..70015 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927824.4456046-CDS-E-siliculosus-1a_F_contig130:66257..663381622927824.4456046-CDS-E-siliculosus-1a_F_contig130:66257..66338Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig130 66258..66338 +
1696318695.701404-CDS-E-siliculosus-1a_F_contig130:66257..663381696318695.701404-CDS-E-siliculosus-1a_F_contig130:66257..66338Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig130 66258..66338 +
1622927824.4618-CDS-E-siliculosus-1a_F_contig130:66653..674601622927824.4618-CDS-E-siliculosus-1a_F_contig130:66653..67460Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig130 66654..67460 +
1696318695.7112832-CDS-E-siliculosus-1a_F_contig130:66653..674601696318695.7112832-CDS-E-siliculosus-1a_F_contig130:66653..67460Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig130 66654..67460 +
1622927824.4734707-CDS-E-siliculosus-1a_F_contig130:68472..690241622927824.4734707-CDS-E-siliculosus-1a_F_contig130:68472..69024Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig130 68473..69024 +
1696318695.7210996-CDS-E-siliculosus-1a_F_contig130:68472..690241696318695.7210996-CDS-E-siliculosus-1a_F_contig130:68472..69024Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig130 68473..69024 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig130.1834.1

>prot_E-siliculosus-1a_F_contig130.1834.1 ID=prot_E-siliculosus-1a_F_contig130.1834.1|Name=mRNA_E-siliculosus-1a_F_contig130.1834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=480bp
MSEGDYRVADISLADFGRREIDIAEHEMPGLMSCREEFPGQLEGARVSGS
LHMTIQTAVLIETLKALSSDIRWCSCNIFSTQDHAAAAIARDESAAVFAW
KGESLEEYWECTLSALTWPEADDKGTGPDIIVDDGGDMTLLIHEGFKAEN
AYEKDGTLPDPESAGDNAEFRIVLTIIKRELPKTPRKWHELAARCVGVSE
ETTTGVHRLYMMEKDESLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLCR
ATDVMIAGKSAVICGYGDVGKGCAQAMKAAGAVVYVTEVDPICALQAAME
GFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNE
IDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSF
VMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQ
VELTELSTEQADYISVKKEGPFKPDTYRY*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig130:66193..70015+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig130.1834.1 ID=mRNA_E-siliculosus-1a_F_contig130.1834.1|Name=mRNA_E-siliculosus-1a_F_contig130.1834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3823bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig130:66193..70015+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCTGCACCATTCTCTCCCGCCGAGGCCAACACACACTCCATATCCACTC
GACAATCCGGTTACCATGAGCGAGGGAGACTACCGTGTTGCTGACATCTC
GCTGGCCGACTTCGGTCGCCGCGAGATCGATATCGCTGAACATGAGGTAA
GAAAGCGAGCGATTTCGTGGACACGAGCTGCCCATAATATTCCCTTGAAC
TGGAGCAGCATATGCATACCCGCATTTGGCCTGTGTGGGTAGGCCCTGCT
TAGGTTTACGCGCGAGAGCAGCTACCCGTTCTGTCCACTCCCGCCTTATG
CGCACATTTTGCGAGGTTATCCTAGCGCAAGCTGCGCATGCTGCGCGCCC
CGAAATCTCTGGCGCTCGAAATGTGCAATTTCACACCCGCCCTTGCCACG
TCTCTCTAAAAACAGCAGTTGAACCCTTCGGCACCACGTCCCTTGAATCT
TCTCCCTACAGATGCCCGGGCTCATGTCCTGCCGTGAGGAGTTCCCTGGC
CAGCTCGAGGGCGCCCGTGTGTCTGGATCCCTGCACATGACCATCCAGAC
GGCTGTCCTGATCGAGACGCTGAAGGCGCTGAGCTCGGACATCCGTTGGT
GCTCGTGCAACATCTTCTCCACTCAGGATCACGCCGCAGCAGCCATCGCC
CGCGACGAATCTGCCGCAGTGTTCGCCTGGAAGGGCGAGTCTCTTGAGGA
GTACTGGGAGTGCACCCTCAGCGCTCTGACATGGCCCGAGGCGGACGACA
AGGGCACCGGACCCGACATCATCGTTGACGATGGCGGCGACATGACCCTG
CTGATCCACGAGGGTTTCAAGGCCGAAAATGCCTACGAGAAGGACGGCAC
TCTCCCCGACCCGGAGTCGGCAGGAGACAACGCGGAGTTCAGGATCGTCC
TCACGATCATCAAGCGCGAGCTGCCCAAGACTCCCAGGAAGTGGCACGAA
CTGGCGGCGCGCTGCGTGGGCGTTTCGGAGGAAACCACGACAGGTGTACA
CCGCCTGTACATGATGGAGAAGGACGAGAGCCTTCTGTTCCCGGCCATCA
ACGTCAACGACTCGGTCACCAAGTCCAAGTTCGACAACCTGTACGGCTGC
AAGCACTCCCTCCCCGACGGTCTCTGCCGCGCGACCGACGTCATGATCGC
CGGGAAGTCCGCCGTCATTTGCGGCTATGGTGACGTCGGTAAGGGATGCG
CCCAGGCCATGAAGGCTGCCGGTGCCGTCGTGTACGTCACGGAGGTGGAC
CCCATCTGCGCTCTTCAGGTCAGTGAAATATGAAGTATGAAGTATGCATA
GAAAACAAGTGGCGCGTTCGTGTTTTTCCGCAAGAGATGTCTCCGGCTTG
GCTGGTACAAGAATGTGTTCCGCGTACCGCGTGAACCTGTGAAATCGAGT
ACAAATTTTACTACAATGAGTCAACGAGTTGAAAAGTTGCCGGCTGCGTG
TGGCCATGACGCGGCCTGCGATCAAGTTTATTACAACGGCATGGCATTGT
TCGTTGGAGGTCATGCCAACGAAAAACTGCTCATAGATGTGCGCACCGTC
GCCACTCCAGATGCAAAAAATCACGAGGTCGGTCGTTTGTCAGCGTTTGC
CAGTTTTTTGTTGGTGTCACTTCATAAATCAGCGCTCATACCCGCGCAAC
ATTTCGGCCATGTGGTAGATACAGGAGCTCCAATCCCCGTTCCTCCTCCT
GAGCCCCCCAATCCACCCCTCCTGCGGTGCATGCCTTCGATTTTTAACTC
CCGGAGTACAGCACTCCGTCCGCTCAACGCGTCCACACACGACGTGGCGA
TATCCACGACCACCTTGATGCAGTTTTTTCGTAAAATGGTCTTGTTACAG
TAGTATTACGGGTTTCACTGGAACGTCCTATACCACTGTGGATATTTCTC
GTGGTATCGTTAGACACGAAACAATCATGAAACCAGTCTCTGTCGACTCC
GAAATCTTGTATATTAATATCAAGATAATCCGGTCTCCCCGGTGGCAAGC
GGTCTTGGACTTTCGGATTTGTTTATGATAAATCCATGTGTCGACATGTG
CTACTCCATGTTTGCTTCGCGAAGGAGGCCGCCCCAAGACCGCCCCTGAA
CTCCTGTAGCTGGTCAAACGATCGCATTGGTGCGGCATGCTAATCGTTCA
TGGTCAGCCGTGCACGTGTACTTGAAAGTGCAGCGTGCAATCCACTCGAG
TACGGGGCATCCCGACTTCCTTGACTCACACCTGCGTGATCACGTCCCTC
CCCAACAATCACAACTTGTCCGGTTGTCAGGCTGCGATGGAAGGCTTCCG
TGTTGTGAAGCTCGACACCGTCGTGGGCACCGGTGACATCTTCATCACCA
CCACCGGGAACAAGGGAATCATTATGGCCGCGGACATGGCCAAGATGAAG
AACAACGCCATCGTGGGCAACATCGGCCACTTCGACAACGAGATCGACCT
CGCCGGCCTGGTCGCCACCACCAAGCAGCTCAACATCAAGCCGCAGGTGG
ACAAGTTCATCTTCGACGACGGCCACGCGATCATCCTCCTCGCCGAAGGG
CGTCTGCTCAACTTGGGATGCGCCACTGGGCACCCCTCGTTCGTCATGTC
CGCGTCGTTCACAAACCAGACACTGGCGCAGCTCGAGTTGTGGAAGGAGA
AGGAATCGGGCAAGTACGCGCGTGGCCACGTGTACGTACTGCCGAAGCTT
CTCGACGAGAAGGTCGCCCGCTTGCACCTCAAGTCTCTCCAGGTGGAGCT
CACCGAGTTGTCGACCGAGCAGGCGGACTACATTTCGGTCAAGAAGGAAG
GCCCTTTCAAGCCCGACACCTACCGTTACTGAGCGATTTCCGTTGGCGTT
TCGTGCTTCACCAGTAGGTAGACGTTTCCCCCGCATCCTTGCCAAGTAGT
TACCCGTAGAGATGATGCTTTTAAGCAAGGTCGCCAGGGATACCGTAGAT
TTGGCTGTTTCCCGCTGCGGTGGCATGCACACCCATTTCAACGTCAAAGA
TCGTGAAGATTGATGCGAATCCAAGGATATACTCATCGTGTTTCCCACGA
TGTGTTTTTTGTTTTGTGTGCCTGTCGGGGCATGTTTCTATCAAAGCGAA
CGCTTTCCCGCGACAACCAAAAAGGGCTATTGATTCGTCCTCTACGTGTT
GCGTGCTCGCTCTCCACCGCCCGCCAAACGCCCTTTCCACCAAAGGTTCA
GTCCGTTCATCCGTTCGCACTATCGAACACATGCACTTGATTGTAGCACG
CTCCTTCGACGTTTACCCACCACCATGTTGTCCAAAAAGTGGTGACTGTG
CAACCGAGATCGATCGGGCTAGTTCGGAAAATAGTGCAAGCTTTTTCTGA
GATGAGCTGTAGACATGTATATCCCGTACAATTAGCTGCACCTGATGTAC
ATGCCTGATGCATTGTTTGTACATGGAGCACACGAAGAGTCCCATTACTA
TTGATCTGATGGTCGATTATTTTCAAGCGCATCAGAGACATTTACCCGTT
AACTCCGTTGAAAATTGTTGCTTCGAGCAATGCGGTAACAGGACTTGAGC
TTTAGACCGTCAGCCTATCATCGTGAACATGGGAAAGCATAGCATTTTCG
TCGGGCGTACGAAGCCCAAAAATTCTCGAACGCGACAACATAGGTTTACC
ACAACCGACACTAGGGTGGCACGGTTCAACGCGATAAACCGAAATGCAAC
CCTGCAGTCTGGATTCCGCGTGGTCTTGGGTCGAACGCAAATTATAACGC
ACTGTTTTCTAATACATTGCCCTGCTCTGCTCTGGCAGGGCTTCCTCCAA
TCCGAGGTCCTCTCTTTCCTTGG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig130:66193..70015+

>mRNA_E-siliculosus-1a_F_contig130.1834.1 ID=mRNA_E-siliculosus-1a_F_contig130.1834.1|Name=mRNA_E-siliculosus-1a_F_contig130.1834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2880bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig130:66193..70015+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGCGAGGGAGACTACCGTGTTGCTGACATCTCGCTGGCCGACTTCGG
TCGCCGCGAGATCGATATCGCTGAACATGAGATGAGCGAGGGAGACTACC
GTGTTGCTGACATCTCGCTGGCCGACTTCGGTCGCCGCGAGATCGATATC
GCTGAACATGAGATGCCCGGGCTCATGTCCTGCCGTGAGGAGTTCCCTGG
CCAGCTCGAGGGCGCCCGTGTGTCTGGATCCCTGCACATGACCATCCAGA
CGGCTGTCCTGATCGAGACGCTGAAGGCGCTGAGCTCGGACATCCGTTGG
TGCTCGTGCAACATCTTCTCCACTCAGGATCACGCCGCAGCAGCCATCGC
CCGCGACGAATCTGCCGCAGTGTTCGCCTGGAAGGGCGAGTCTCTTGAGG
AGTACTGGGAGTGCACCCTCAGCGCTCTGACATGGCCCGAGGCGGACGAC
AAGGGCACCGGACCCGACATCATCGTTGACGATGGCGGCGACATGACCCT
GCTGATCCACGAGGGTTTCAAGGCCGAAAATGCCTACGAGAAGGACGGCA
CTCTCCCCGACCCGGAGTCGGCAGGAGACAACGCGGAGTTCAGGATCGTC
CTCACGATCATCAAGCGCGAGCTGCCCAAGACTCCCAGGAAGTGGCACGA
ACTGGCGGCGCGCTGCGTGGGCGTTTCGGAGGAAACCACGACAGGTGTAC
ACCGCCTGTACATGATGGAGAAGGACGAGAGCCTTCTGTTCCCGGCCATC
AACGTCAACGACTCGGTCACCAAGTCCAAGTTCGACAACCTGTACGGCTG
CAAGCACTCCCTCCCCGACGGTCTCTGCCGCGCGACCGACGTCATGATCG
CCGGGAAGTCCGCCGTCATTTGCGGCTATGGTGACGTCGGTAAGGGATGC
GCCCAGGCCATGAAGGCTGCCGGTGCCGTCGTGTACGTCACGGAGGTGGA
CCCCATCTGCGCTCTTCAGATGCCCGGGCTCATGTCCTGCCGTGAGGAGT
TCCCTGGCCAGCTCGAGGGCGCCCGTGTGTCTGGATCCCTGCACATGACC
ATCCAGACGGCTGTCCTGATCGAGACGCTGAAGGCGCTGAGCTCGGACAT
CCGTTGGTGCTCGTGCAACATCTTCTCCACTCAGGATCACGCCGCAGCAG
CCATCGCCCGCGACGAATCTGCCGCAGTGTTCGCCTGGAAGGGCGAGTCT
CTTGAGGAGTACTGGGAGTGCACCCTCAGCGCTCTGACATGGCCCGAGGC
GGACGACAAGGGCACCGGACCCGACATCATCGTTGACGATGGCGGCGACA
TGACCCTGCTGATCCACGAGGGTTTCAAGGCCGAAAATGCCTACGAGAAG
GACGGCACTCTCCCCGACCCGGAGTCGGCAGGAGACAACGCGGAGTTCAG
GATCGTCCTCACGATCATCAAGCGCGAGCTGCCCAAGACTCCCAGGAAGT
GGCACGAACTGGCGGCGCGCTGCGTGGGCGTTTCGGAGGAAACCACGACA
GGTGTACACCGCCTGTACATGATGGAGAAGGACGAGAGCCTTCTGTTCCC
GGCCATCAACGTCAACGACTCGGTCACCAAGTCCAAGTTCGACAACCTGT
ACGGCTGCAAGCACTCCCTCCCCGACGGTCTCTGCCGCGCGACCGACGTC
ATGATCGCCGGGAAGTCCGCCGTCATTTGCGGCTATGGTGACGTCGGTAA
GGGATGCGCCCAGGCCATGAAGGCTGCCGGTGCCGTCGTGTACGTCACGG
AGGTGGACCCCATCTGCGCTCTTCAGGCTGCGATGGAAGGCTTCCGTGTT
GTGAAGCTCGACACCGTCGTGGGCACCGGTGACATCTTCATCACCACCAC
CGGGAACAAGGGAATCATTATGGCCGCGGACATGGCCAAGATGAAGAACA
ACGCCATCGTGGGCAACATCGGCCACTTCGACAACGAGATCGACCTCGCC
GGCCTGGTCGCCACCACCAAGCAGCTCAACATCAAGCCGCAGGTGGACAA
GTTCATCTTCGACGACGGCCACGCGATCATCCTCCTCGCCGAAGGGCGTC
TGCTCAACTTGGGATGCGCCACTGGGCACCCCTCGTTCGTCATGTCCGCG
TCGTTCACAAACCAGACACTGGCGCAGCTCGAGTTGTGGAAGGAGAAGGA
ATCGGGCAAGTACGCGCGTGGCCACGTGTACGTACTGCCGAAGCTTCTCG
ACGAGAAGGTCGCCCGCTTGCACCTCAAGTCTCTCCAGGTGGAGCTCACC
GAGTTGTCGACCGAGCAGGCGGACTACATTTCGGTCAAGAAGGAAGGCCC
TTTCAAGCCCGACACCTACCGTTACTGAGCTGCGATGGAAGGCTTCCGTG
TTGTGAAGCTCGACACCGTCGTGGGCACCGGTGACATCTTCATCACCACC
ACCGGGAACAAGGGAATCATTATGGCCGCGGACATGGCCAAGATGAAGAA
CAACGCCATCGTGGGCAACATCGGCCACTTCGACAACGAGATCGACCTCG
CCGGCCTGGTCGCCACCACCAAGCAGCTCAACATCAAGCCGCAGGTGGAC
AAGTTCATCTTCGACGACGGCCACGCGATCATCCTCCTCGCCGAAGGGCG
TCTGCTCAACTTGGGATGCGCCACTGGGCACCCCTCGTTCGTCATGTCCG
CGTCGTTCACAAACCAGACACTGGCGCAGCTCGAGTTGTGGAAGGAGAAG
GAATCGGGCAAGTACGCGCGTGGCCACGTGTACGTACTGCCGAAGCTTCT
CGACGAGAAGGTCGCCCGCTTGCACCTCAAGTCTCTCCAGGTGGAGCTCA
CCGAGTTGTCGACCGAGCAGGCGGACTACATTTCGGTCAAGAAGGAAGGC
CCTTTCAAGCCCGACACCTACCGTTACTGA
back to top