mRNA_E-siliculosus-1a_F_contig1019.180.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1019.180.1
Unique NamemRNA_E-siliculosus-1a_F_contig1019.180.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: A0A6H5KZA5_9PHAE (LITAF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZA5_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 1.730e-106
Identity = 223/251 (88.84%), Postives = 229/251 (91.24%), Query Frame = 1 
Query:  109 MASRSGYKSLPDSAADEDARTADAEQPQQVAAAGARRPAVPGKGEDPPEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAASSADRGGGELPTAQGVFVGDPVSQSTPYHAAPPARATVITSAPASYEHVAAXXXXXXXXXXXXIAVPSGXXXQHTVIVMNAPPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDPCSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVGRSRQFN 861
            MASRSGYKSLPDSAA+EDARTADAEQ  QVAAAGA RPA PGKGEDP    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           ELPTAQG+FVGDPVSQSTPYHAAPPA ATVITSAPASY+HVAAXXXXXXXXXX  IAVPSGXXXQHTVIVMNAPPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDPCSN+PILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCH+SVGRSRQF+
Sbjct:    1 MASRSGYKSLPDSAAEEDARTADAEQ--QVAAAGAPRPAAPGKGEDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ELPTAQGIFVGDPVSQSTPYHAAPPAHATVITSAPASYDHVAAXXXXXXXXXXG-IAVPSGXXXQHTVIVMNAPPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDPCSNIPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHVSVGRSRQFD 245
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: UPI001E6894C5 (uncharacterized protein LOC123879585 n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E6894C5)

HSP 1 Score: 60.1 bits (144), Expect = 3.320e-6
Identity = 41/135 (30.37%), Postives = 60/135 (44.44%), Query Frame = 1 
Query:  478 ITSAPASYEHVAAXXXXXXXXXXXXIAVPSGXXXQHT----------VIVMNA-PPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDP--CSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
            + SAP SY  V                +PS    QHT          + V N  PPP  +   +G  P A VC  CG+TG+++  +    C++   L A   CL+ CW C+ +P+L+   +D  H C NC   +G
Sbjct:  157 LISAPPSYSFVLRQMAVRRRPRLMGTFIPSPSYIQHTPPPNYATAFDIYVDNPLPPPPARVYNFGFTPMAIVCPECGYTGMTVVASKITLCTH---LCACILCLLCCWICAPLPYLLRSCKDVYHYCRNCRNFLG 288
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: A0A7S2FLP8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLP8_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 5.280e-6
Identity = 27/73 (36.99%), Postives = 40/73 (54.79%), Query Frame = 1 
Query:  634 WGRQPQAFVCRACGFTGLSLTMTDPCSNMPILAAACCCLVGC-WPCSFVPFLIPELRDTVHRCPNCHISVGRS 849
            +GRQP    C +C     S+  T+P   M + A    C +GC + C  +PF +   +   HRCP+CHIS+G+S
Sbjct:   83 FGRQPTRCFCHSCNKEVQSMVTTEP-GLMAVGACVLLCCIGCDFGCCLIPFCVDGCKVAHHRCPDCHISLGKS 154
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: A0A8J9V3R1_9NEOP ((lesser marbled fritillary) hypothetical protein (Fragment) n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9V3R1_9NEOP)

HSP 1 Score: 59.3 bits (142), Expect = 6.280e-6
Identity = 40/133 (30.08%), Postives = 59/133 (44.36%), Query Frame = 1 
Query:  478 ITSAPASYEHVAAXXXXXXXXXXXXIAVPSGXXXQHT----------VIVMNA-PPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDPCSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
            +TSAP SY  V                +PS    QHT          + V NA PPP  +   +G  P   +C  CGFTG+++ +    +    L A   CL+ CW C+ +P+++   +D  H C NC   +G
Sbjct:  165 LTSAPPSYSFVLRQMGARRPRLMGTF-IPSPSFVQHTPPPNYATAFDIYVDNAIPPPPPRVHNFGLTPTPIICPECGFTGMTV-VASKITLSTHLCAIILCLLCCWVCAPLPYVLRSCKDVYHYCRNCRSFLG 295
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: UPI00156879E2 (uncharacterized protein LOC117994925 n=1 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI00156879E2)

HSP 1 Score: 58.9 bits (141), Expect = 7.870e-6
Identity = 41/135 (30.37%), Postives = 60/135 (44.44%), Query Frame = 1 
Query:  478 ITSAPASYEHVAAXXXXXXXXXXXXIAVPSGXXXQHT----------VIVMNA-PPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDP--CSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
            + SAP SY  V                +PS    QHT          + V N  PPP  +   +G  P A VC  CG+TG+++  +    C++   L A   CL+ CW C+ +P+L+   +D  H C NC   +G
Sbjct:  156 LISAPPSYSFVLRQMAVRRRPRLMGTFIPSPSYIQHTPPPNYATAFDIYVDNPLPPPPTRVYNFGFTPIAIVCPDCGYTGMTIVASKITLCTH---LCACILCLLCCWICAPLPYLLRSCKDVYHYCRNCRNFLG 287
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: UPI0019D31437 (uncharacterized protein LOC120635560 n=1 Tax=Pararge aegeria TaxID=116150 RepID=UPI0019D31437)

HSP 1 Score: 58.9 bits (141), Expect = 8.100e-6
Identity = 40/135 (29.63%), Postives = 60/135 (44.44%), Query Frame = 1 
Query:  478 ITSAPASYEHVAAXXXXXXXXXXXXIAVPSGXXXQHT----------VIVMNA-PPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDP--CSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
            +TSAP SY  V                +PS    QHT          + V N  PPP  +   +G  P   VC  CG+TG+++  +    C++   L A   CL+ CW C+ +P+++   +D  H C NC   +G
Sbjct:  156 LTSAPPSYSFVLRQMAVRRRPRLMGTFIPSPSYIQHTPPPNYTTAFDIYVDNPLPPPPPRVYNFGFTPVTIVCPECGYTGMTVVASKITLCTH---LCAVTLCLLCCWICAPLPYVLRSCKDVYHYCRNCRNFLG 287
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: UPI00067E15F3 (uncharacterized protein LOC106141597 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067E15F3)

HSP 1 Score: 59.7 bits (143), Expect = 9.320e-6
Identity = 38/130 (29.23%), Postives = 55/130 (42.31%), Query Frame = 1 
Query:  484 SAPASYEHVAAXXXXXXXXXXXXIAVPSGXXXQHT----------VIVMNAPPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDPCSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
            SAP SY  V                +PS    QHT          + + N PPP  +   +G  P   VC  CGFTG++  +T   +    L A   C++ CW C  +P+++   +D  H C NC   +G
Sbjct:  357 SAPPSYSFVLRQMAVRRRPRMFGTFIPSPSFVQHTPPPTYTASFDIYLDNVPPPPTRVYNFGFAPMLVVCPDCGFTGMT-QVTSKITLCTHLCAIVLCIMCCWICVPLPYIMRSCKDVSHYCRNCRSFLG 485
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: A0A2W1BPF2_HELAM (LITAF domain-containing protein n=2 Tax=Helicoverpa TaxID=7112 RepID=A0A2W1BPF2_HELAM)

HSP 1 Score: 58.9 bits (141), Expect = 1.190e-5
Identity = 38/134 (28.36%), Postives = 56/134 (41.79%), Query Frame = 1 
Query:  478 ITSAPASYEHVAAXXXXXXXXXXXXIAVPSGXXXQHT------------VIVMNAPPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDPCSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
            +TSAP SY  V                 PS     HT            +   N PPP  +   +G  P   VC  CG+TG+++ +T   +    L A   CL+ CW C+ +P+++   +D  H C NC   +G
Sbjct:  231 LTSAPPSYSFVLRQMAVRRRPRFMGTFYPSPSFVPHTPPPTYTTAFDVYIEPANVPPPPARVYTFGFAPMPIVCPECGYTGMTV-VTSRITICTHLCALILCLLCCWICAPLPYILRSCKDVYHYCRNCRSFLG 363
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: A0A2W1BSY9_HELAM (LITAF domain-containing protein n=1 Tax=Helicoverpa armigera TaxID=29058 RepID=A0A2W1BSY9_HELAM)

HSP 1 Score: 55.1 bits (131), Expect = 2.360e-5
Identity = 26/63 (41.27%), Postives = 35/63 (55.56%), Query Frame = 1 
Query:  658 VCRACGFTGLSLTMTDPCSNMPI-LAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
             C +C      +T  +  SNM   L AA  C+VGCWPC+FVP+ +   R+  H CPNC   +G
Sbjct:   90 TCPSCNHQ--IVTRVEYKSNMRTHLFAALLCIVGCWPCAFVPYFVDSCRNADHYCPNCSAYIG 150
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BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Match: A0A2A4JWY3_HELVI (LITAF domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JWY3_HELVI)

HSP 1 Score: 53.9 bits (128), Expect = 5.920e-5
Identity = 19/39 (48.72%), Postives = 27/39 (69.23%), Query Frame = 1 
Query:  727 LAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVG 843
            L AA  C++GCWPC+FVP+ +   R+  H CPNC+  +G
Sbjct:  112 LFAALLCVIGCWPCAFVPYFVDSCRNADHYCPNCNSYIG 150
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1019.180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KZA5_9PHAE1.730e-10688.84LITAF domain-containing protein n=2 Tax=Ectocarpus... [more]
UPI001E6894C53.320e-630.37uncharacterized protein LOC123879585 n=1 Tax=Manio... [more]
A0A7S2FLP8_9STRA5.280e-636.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J9V3R1_9NEOP6.280e-630.08(lesser marbled fritillary) hypothetical protein (... [more]
UPI00156879E27.870e-630.37uncharacterized protein LOC117994925 n=1 Tax=Aphan... [more]
UPI0019D314378.100e-629.63uncharacterized protein LOC120635560 n=1 Tax=Parar... [more]
UPI00067E15F39.320e-629.23uncharacterized protein LOC106141597 n=1 Tax=Amyel... [more]
A0A2W1BPF2_HELAM1.190e-528.36LITAF domain-containing protein n=2 Tax=Helicoverp... [more]
A0A2W1BSY9_HELAM2.360e-541.27LITAF domain-containing protein n=1 Tax=Helicoverp... [more]
A0A2A4JWY3_HELVI5.920e-548.72LITAF domain-containing protein n=1 Tax=Heliothis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1019contigE-siliculosus-1a_F_contig1019:23945..26831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size756
Model size1673
Exons2
Ec32 orthologEc-18_003300.1
Ec32 ortholog descriptionLPS-induced tumour necrosis factor alpha factor
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001
Best eggNOG OGNA|NA|NA
Best tax levelLepidoptera
COG Functional cat.S
EggNOG OGs2DZV6@1,2S710@2759,3A8H2@33154,3BUIV@33208,3DBMU@33213,3SPCH@50557,420YT@6656,447MQ@7088
EggNOG free text desc.Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins.
GOsGO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009631,GO:0050896
KEGG Pathwayko04142,map04142
KEGG koko:K19363
Seed eggNOG ortholog7091.BGIBMGA000884-TA
Seed ortholog evalue1e-06
Seed ortholog score60.8
Taxonomic scopeArthropoda
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1019.180.1prot_E-siliculosus-1a_F_contig1019.180.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1019 24754..26723 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927520.3909898-UTR-E-siliculosus-1a_F_contig1019:23944..247531622927520.3909898-UTR-E-siliculosus-1a_F_contig1019:23944..24753Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1019 23945..24753 -
1696318565.7763834-UTR-E-siliculosus-1a_F_contig1019:23944..247531696318565.7763834-UTR-E-siliculosus-1a_F_contig1019:23944..24753Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1019 23945..24753 -
1622927520.424335-UTR-E-siliculosus-1a_F_contig1019:26723..268311622927520.424335-UTR-E-siliculosus-1a_F_contig1019:26723..26831Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1019 26724..26831 -
1696318565.8290806-UTR-E-siliculosus-1a_F_contig1019:26723..268311696318565.8290806-UTR-E-siliculosus-1a_F_contig1019:26723..26831Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1019 26724..26831 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927520.4010868-CDS-E-siliculosus-1a_F_contig1019:24753..249151622927520.4010868-CDS-E-siliculosus-1a_F_contig1019:24753..24915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1019 24754..24915 -
1696318565.7952049-CDS-E-siliculosus-1a_F_contig1019:24753..249151696318565.7952049-CDS-E-siliculosus-1a_F_contig1019:24753..24915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1019 24754..24915 -
1622927520.4129603-CDS-E-siliculosus-1a_F_contig1019:26129..267231622927520.4129603-CDS-E-siliculosus-1a_F_contig1019:26129..26723Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1019 26130..26723 -
1696318565.8066502-CDS-E-siliculosus-1a_F_contig1019:26129..267231696318565.8066502-CDS-E-siliculosus-1a_F_contig1019:26129..26723Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1019 26130..26723 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1019.180.1

>prot_E-siliculosus-1a_F_contig1019.180.1 ID=prot_E-siliculosus-1a_F_contig1019.180.1|Name=mRNA_E-siliculosus-1a_F_contig1019.180.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=252bp
MASRSGYKSLPDSAADEDARTADAEQPQQVAAAGARRPAVPGKGEDPPEV
GGNGSGGSASGGGGGGDGSKATTTTAELEKKDPAASSADRGGGELPTAQG
VFVGDPVSQSTPYHAAPPARATVITSAPASYEHVAAAAAAAAAGDGRGIA
VPSGGGGQHTVIVMNAPPPGHQFGEWGRQPQAFVCRACGFTGLSLTMTDP
CSNMPILAAACCCLVGCWPCSFVPFLIPELRDTVHRCPNCHISVGRSRQF
N*
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mRNA from alignment at E-siliculosus-1a_F_contig1019:23945..26831-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1019.180.1 ID=mRNA_E-siliculosus-1a_F_contig1019.180.1|Name=mRNA_E-siliculosus-1a_F_contig1019.180.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2887bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1019:23945..26831- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CATAAAGCCTTCTGCTCTGGTCGAGGTGGGCTTCCGGCTACGGGTTCAAG
TAGCGTACTATCCACTCGCCGCGGACAGCGAGAGGTCGACAACGGACGTG
CTGAAGCCATGGCGTCCCGAAGCGGCTACAAGTCTCTTCCGGATTCCGCC
GCAGATGAGGATGCCCGAACCGCCGACGCGGAGCAACCTCAACAAGTTGC
CGCTGCTGGCGCACGCAGGCCAGCAGTACCCGGCAAGGGCGAAGACCCTC
CCGAAGTCGGAGGAAACGGCTCTGGAGGAAGTGCCAGCGGCGGCGGCGGC
GGCGGCGACGGCAGCAAAGCGACGACAACAACGGCGGAGCTAGAGAAAAA
GGACCCTGCAGCTTCTTCAGCGGACCGTGGTGGCGGAGAGTTGCCCACTG
CGCAGGGCGTCTTCGTCGGCGACCCCGTCTCCCAATCCACACCGTACCAC
GCCGCCCCCCCTGCGCGTGCCACCGTGATCACGTCTGCACCGGCATCCTA
CGAACATGTAGCTGCCGCCGCCGCCGCTGCTGCTGCGGGAGACGGTCGGG
GCATTGCCGTGCCAAGCGGGGGAGGCGGGCAGCACACGGTGATCGTGATG
AACGCGCCGCCGCCGGGGCATCAGTTCGGAGAGTGGGGGAGGCAACCCCA
GGCCTTTGTTTGTCGGGCCTGCGGGTTCACGGGCTTGTCACTCACCATGA
CGGTAAGAGGATCTCATGCTTGTTTTGGGTGGGGTTTTAAGAACATGATA
ACTTCCGGGGACCGCTGCGGACGGCCGCATTTATAGTCTATAGCTGTAGG
GAGGCTGCGCAAATGTCGCTTTTCCCCCGAAAATGTTCCTGTTTGGGGCG
GACGGGGCAACCGGAACTGCTTTAGACTGCTGTATGCATAATGACCAAGA
GACACATACTATTTTTCATGCTGTTTGCAACCCACCGTTCCACAAATTCC
AGAACCGGTTGTCACACAACCGCAGCCGTCGACGATTGTTCACTCGTGCC
TCGAAGAACACACAGGGGACGGCCAGGGGGAGACATTTCCCCCGTTTTTT
TGTGTCGAAAAGAACACAGCAGTTTACAAGACTCGAGTCAGGTCGAAAAT
AACACAGTGGGGGAGGCAACCCCACGACTTTGCAAGACGCAACGGGCGGT
GCAGGACACGTTACTAGTACAACCCTGCGTCACTGCGGGCGCTCCTACCA
CGTTCGACCGACTTTCAAAACAGCCCCTCAATAGATTTGACGGACAACAG
CAGTCGTACCTAAGAGATGTCGGTGCAACGCGTCGGTCGCTGCGCGCCGC
AAGGCCCCACCTGGAGAATGTTGTGTGCAAGGTTGTAGGAGGTGGCTTTT
CGCATGAATGGGGTCGTTGGGAATCACCACTCGTGCCAATTGCCGGTTCA
CAACTTTTGTGCCACCAGCATCTGCTTGACCTAGAGGATTCCCCCTGAGG
TTGGGTTCCGGTGCAGCGGCAACGAAGGCCAGCTGAAGATGACTACAAGT
ACACCACAGGAGAAAAAGAGGCGGTTTTGCGAAAAGCGACGTTGGTGTGT
ACCAGGGCTGGTCACCCCAAGGGTTTCGGTTGTTAATGGCTTCACCGCCT
CTTCGGAAGTGAGTTCACATCTCGGCACAAGCAGTTAAACACACCAACTG
GGTGTATGCGGCGGCTCGCACTTCGGTTGCGCAGCGATGGCAACAGCCCC
TTCGGATGCATTCCACGGAGGCTGGCTTGGGTACGTGCGTGTCTTCTCGT
GTTCATTTCCGGGGACGGTTTCGTGACGCGCTGCGGTACTTCCTTGGCAC
ACAACCCACACACTCTGGATACCTCCCGTGTGTGCATGTGACAGTGATCG
CTTGCAAAGACGGCAACGACAGTTAGTCTTACGCGTTACCTTTTGTCGTT
TCTGGGTTGCCGACAGGACCCTTGCTCCAACATGCCAATCCTGGCCGCGG
CGTGCTGCTGCCTCGTGGGATGCTGGCCCTGCAGCTTCGTCCCGTTTCTG
ATTCCGGAGCTCCGAGATACAGTGCACCGGTGCCCGAATTGTCACATATC
CGTTGGCCGATCTCGACAGTTCAATTGATCGAAAACGAGTTACTGTAGTG
TTGCCTTCTTTGGTTCTCTTGTAGTTTTGACGGAAAGCTGACATAGTTTG
AGATTTTGCGGAGCAGTTGTGGTTTGTTGATGTGCTTCTGATTGGATAGG
ATGTAGAAGCCGTATAATATGTATGTGACGGTCGGTTTTCTTTTGTGCCT
TTGAAGCGAAAGCGAACTTCGCAGTTTTTTGTATGAGTTGTATGGTGCCA
TGCATGTCTACTGGTGAATGGCGTCTTGTGTTCCACCACACCGTTGGAGC
TAGGCGCATGGGGTATAATTTATGGCGGGCCTTGGGGGTAGCATGAGTTG
CGGGACCGTCCGTTACGTGATGGTCGTCCCAGCGATCGACGTGATAGATG
AGCGTGCTAAACGGCTCCCACCTCGTTCTGTGGGAACGAATGTGAGACCA
CGCGGGGTCAAAGTGACCGGATTCACCGGTGCCTTTTCTCTTGGCTTTGT
TGAGCGGGTGGTGGTTGTTTTGCCCGTTTTCAAGACGCACGGCGATCATT
CACGTCATGCTCCTTTGAGCTCCGAGTAAGAGCGCCCTCTTACGGCATGG
CACATCGTACTGTACGGAAGCGTTAGCGAAGATCTCGGATGTACCTTTAC
CGTCCGCCACGCTAGCAAGTTGCCCGTGCATATGTTTTCTTGTGCCTGGC
TGTGTATTGCCTTCTCGATATTGACCGCGCTCGAAGAGATATCCGTCTTA
TCGGAACATTGAAAACGGAACATTGAGAACACCTGGAGTAGAACGGTCAA
CTGCGTCTGCGCTAGCACCAATACATTCTATGCTGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1019:23945..26831-

>mRNA_E-siliculosus-1a_F_contig1019.180.1 ID=mRNA_E-siliculosus-1a_F_contig1019.180.1|Name=mRNA_E-siliculosus-1a_F_contig1019.180.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1019:23945..26831- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGTCCCGAAGCGGCTACAAGTCTCTTCCGGATTCCGCCGCAGATGA
GGATGCCCGAACCGCCGACGCGGAGCAACCTCAACAAGTTGCCGCTGCTG
GCGCACGCAGGCCAGCAGTACCCGGCAAGGGCGAAGACCCTCCCGAAGTC
GGAGGAAACGGCTCTGGAGGAAGTGCCAGCGGCGGCGGCGGCGGCGGCGA
CGGCAGCAAAGCGACGACAACAACGGCGGAGCTAGAGAAAAAGGACCCTG
CAGCTTCTTCAGCGGACCGTGGTGGCGGAGAGTTGCCCACTGCGCAGGGC
GTCTTCGTCGGCGACCCCGTCTCCCAATCCACACCGTACCACGCCGCCCC
CCCTGCGCGTGCCACCGTGATCACGTCTGCACCGGCATCCTACGAACATG
TAGCTGCCGCCGCCGCCGCTGCTGCTGCGGGAGACGGTCGGGGCATTGCC
GTGCCAAGCGGGGGAGGCGGGCAGCACACGGTGATCGTGATGAACGCGCC
GCCGCCGGGGCATCAGTTCGGAGAGTGGGGGAGGCAACCCCAGGCCTTTG
TTTGTCGGGCCTGCGGGTTCACGGGCTTGTCACTCACCATGACGATGGCG
TCCCGAAGCGGCTACAAGTCTCTTCCGGATTCCGCCGCAGATGAGGATGC
CCGAACCGCCGACGCGGAGCAACCTCAACAAGTTGCCGCTGCTGGCGCAC
GCAGGCCAGCAGTACCCGGCAAGGGCGAAGACCCTCCCGAAGTCGGAGGA
AACGGCTCTGGAGGAAGTGCCAGCGGCGGCGGCGGCGGCGGCGACGGCAG
CAAAGCGACGACAACAACGGCGGAGCTAGAGAAAAAGGACCCTGCAGCTT
CTTCAGCGGACCGTGGTGGCGGAGAGTTGCCCACTGCGCAGGGCGTCTTC
GTCGGCGACCCCGTCTCCCAATCCACACCGTACCACGCCGCCCCCCCTGC
GCGTGCCACCGTGATCACGTCTGCACCGGCATCCTACGAACATGTAGCTG
CCGCCGCCGCCGCTGCTGCTGCGGGAGACGGTCGGGGCATTGCCGTGCCA
AGCGGGGGAGGCGGGCAGCACACGGTGATCGTGATGAACGCGCCGCCGCC
GGGGCATCAGTTCGGAGAGTGGGGGAGGCAACCCCAGGCCTTTGTTTGTC
GGGCCTGCGGGTTCACGGGCTTGTCACTCACCATGACGGACCCTTGCTCC
AACATGCCAATCCTGGCCGCGGCGTGCTGCTGCCTCGTGGGATGCTGGCC
CTGCAGCTTCGTCCCGTTTCTGATTCCGGAGCTCCGAGATACAGTGCACC
GGTGCCCGAATTGTCACATATCCGTTGGCCGATCTCGACAGTTCAATTGA
GACCCTTGCTCCAACATGCCAATCCTGGCCGCGGCGTGCTGCTGCCTCGT
GGGATGCTGGCCCTGCAGCTTCGTCCCGTTTCTGATTCCGGAGCTCCGAG
ATACAGTGCACCGGTGCCCGAATTGTCACATATCCGTTGGCCGATCTCGA
CAGTTCAATTGA
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