Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1019.179.1 vs. uniprot
Match:
D8LIK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK2_ECTSI)
HSP 1 Score: 365 bits (936), Expect = 2.140e-118
Identity = 294/515 (57.09%), Postives = 318/515 (61.75%), Query Frame = 0
Query: 1 MHTLYLPP-RTPTRTAHTIDFCFLTTKHKHRRRMLSHQACGLFALLAFAAAWLGVSSAEERPLLTGGEFHRGQSQLGQSRKHTRGVGEAEPEGGGRRGISTTTLHVNEGEFVRQVPSWASSAGATFPPSSRQQHQRRRAADSCEDGDPFSISSLYVPAADGCYFDTYDTT-TDYEIIYTPSGAADVGQMWMFTSGIIGYTTIHWWLSYVTAITDTGLILSAEDYCVSNDQASLYHPADVPSWSCDTDFDVSEDNFGVTCDGGCSPSPSTVLPSPTXXXXXXXXXXXXXXXXXXXEAFTPAXXXXXXT----------------------------------------------------PAPATPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPADDMPEPTSSPQAPVADGSGVVVSQPPATSSPAGAAPLLGGTPAPADPSNTA-QDSDTVGRCAPWSVVATSVAVVVAAVATAVEW 460
MH + PP RTPTRTAHTIDFCFLTTKHKHRRRMLSH ACGLFAL A AA LGV SA+E PLL GGE HRGQ QL QSRKH RG GEAEP GGGRRGISTT LH NEGE + QVPSWAS GA P SSRQ HQRRR ADSCEDGDPFSISS +P ADGCYF+T DTT + EI+Y+PSG QMW+FT G+ G IHWWL +V ++ D+G + YCVSN+ +SLYHPADVPSW C D DVS D+F VTC GGCS PS XXXXXXXXXXXXX EA TP XXXXXX P TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX PADD P P S Q P + V+ +T P GAAPLLGGTPAP+D + A Q SD VGR APWSVVAT V V+AAVA AVEW
Sbjct: 1 MHAYFAPPPRTPTRTAHTIDFCFLTTKHKHRRRMLSHHACGLFAL-ALVAALLGVDSAQEIPLLPGGESHRGQIQLRQSRKHVRGGGEAEPIGGGRRGISTTALHTNEGELLPQVPSWASPVGAAIPSSSRQ-HQRRRTADSCEDGDPFSISSSLIPTADGCYFETDDTTISSDEIVYSPSGTTVAQQMWVFTGGLEGSLNIHWWLGFVNSVDDSGYF-TFSSYCVSNEPSSLYHPADVPSWWCGYDSDVSTDDFDVTCGGGCS-GPSXXX---XXXXXXXXXXXXXXETSEPTEAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPELPTPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTLTSPTPFETSEXXXSPVTTGREIEPVPSLPPADDTPAPIVSTQGPTHWPTPGSVAD--STLPPDGAAPLLGGTPAPSDDQSRAIQGSDAVGRYAPWSVVATIVVGVLAAVAAAVEW 506
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1019.179.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 1
M H T L Y L P P R T P T R T A H T I D F C F L T T K H K H R R R M L S H Q A C G L F A L L A F A A A W L G V S S A E E R P L L T G G E F H R G Q S Q L G Q S R K H T R G V G E A E P E G G G R R G I S T T T L H V N E G E F V R Q V P S W A S S A G A T F P P S S R Q Q H Q R R R A A D S C E D G D P F S I S S L Y V P A A D G C Y F D T Y D T T T D Y E I I Y T P S G A A D V G Q M W M F T S G I I G Y T T I H W W L S Y V T A I T D T G L I L S A E D Y C V S N D Q A S L Y H P A D V P S W S C D T D F D V S E D N F G V T C D G G C S P S P S T V L P S P T P E P A P E T P E P T E V P T P E P P E A F T P A P T P E P P T P A P A T P P T P S P T A M E T P E P T A A S T P S P I P E P P T P V P V T P P T P S P T T V A T P E P T A S S S S T G R E I E P V P S P A P A D D M P E P T S S P Q A P V A D G S G V V V S Q P P A T S S P A G A A P L L G G T P A P A D P S N T A Q D S D T V G R C A P W S V V A T S V A V V V A A V A T A V E W * 50 100 150 200 250 300 350 400 450 Expect = 2.14e-118 / Id = 57.09 Sequence D8LIK2_ECTSI
Match Name E-value Identity Description
D8LIK2_ECTSI 2.140e-118 57.09 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M H T L Y L P P R T P T R T A H T I D F C F L T T K H K H R R R M L S H Q A C G L F A L L A F A A A W L G V S S A E E R P L L T G G E F H R G Q S Q L G Q S R K H T R G V G E A E P E G G G R R G I S T T T L H V N E G E F V R Q V P S W A S S A G A T F P P S S R Q Q H Q R R R A A D S C E D G D P F S I S S L Y V P A A D G C Y F D T Y D T T T D Y E I I Y T P S G A A D V G Q M W M F T S G I I G Y T T I H W W L S Y V T A I T D T G L I L S A E D Y C V S N D Q A S L Y H P A D V P S W S C D T D F D V S E D N F G V T C D G G C S P S P S T V L P S P T P E P A P E T P E P T E V P T P E P P E A F T P A P T P E P P T P A P A T P P T P S P T A M E T P E P T A A S T P S P I P E P P T P V P V T P P T P S P T T V A T P E P T A S S S S T G R E I E P V P S P A P A D D M P E P T S S P Q A P V A D G S G V V V S Q P P A T S S P A G A A P L L G G T P A P A D P S N T A Q D S D T V G R C A P W S V V A T S V A V V V A A V A T A V E W * 50 100 150 200 250 300 350 400 450 Score = 33.64 Score = 43.53 Score = 41.11 Score = 29.23 Score = Score = Score = Score = Score = Score = Sequence PR01217 CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PRINTS PR01217 PRICHEXTENSN coord: 298..315 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 459..460 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..33 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 438..458 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 55..437 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 34..54 None No IPR available TMHMM TMhelix coord: 33..55
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1019.179.1 ID=prot_E-siliculosus-1a_F_contig1019.179.1|Name=mRNA_E-siliculosus-1a_F_contig1019.179.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=461bp back to top