mRNA_E-siliculosus-1a_F_contig1293.1786.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1293.1786.1
Unique NamemRNA_E-siliculosus-1a_F_contig1293.1786.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 4.710e-92
Identity = 149/217 (68.66%), Postives = 170/217 (78.34%), Query Frame = 1
Query:    4 KVGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKA-REFEDQTSKESRRALLRANTAREKLA 651
            KV HDSS Y+VQC  VKS ESTRR+A     GDVRKVAD+ARV+VIC TPEALKEAYLAI+GL E +VLRV NGF SDWMP GYR VKLNPVVN+HLCEIQL LR+FF L+G QH +YE+AR+L VTT MR E LF N+SP+V KEM+RLAG NWR +G+CLPDLQ AAGQYD A    ++ L DAE  A R  ED  SKESR+ALLR N AR +LA
Sbjct:  118 KVAHDSSKYKVQCADVKSWESTRRKASNSCGGDVRKVADMARVAVICATPEALKEAYLAIMGLPEANVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHRELLGDAENDAARVAEDHDSKESRQALLRVNAARARLA 334          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 9.520e-90
Identity = 149/217 (68.66%), Postives = 174/217 (80.18%), Query Frame = 1
Query:    1 MKVGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSKESRRALLRANTAREKLA 651
            M V HDSS YEVQC  +KSRESTRR+A   Y GDVRKVAD+ARV+VIC TPEALKEAYLAI+ L E  VLRV NGF SDWMP GYR VKLNPVVN+HLCEIQL LR FF L+G QHA+YE+AR+L VTT MR++ LF NLSP+V++EM+RLAG NW G+ Y LPD+Q  AGQYDLA    +Q+L DAE++AREFED  S+ESRRA+   NTAR +LA
Sbjct:  118 MNVAHDSSKYEVQCVEIKSRESTRRKASTGYDGDVRKVADMARVTVICATPEALKEAYLAIMELPE--VLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLRGFFELKGGQHAVYEWARELNVTTDMRSKDLFKNLSPEVSEEMIRLAGQNWAGTAYVLPDVQLDAGQYDLAEKSHRQELADAEHEAREFEDHDSEESRRAMHGENTARSRLA 332          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 3.230e-87
Identity = 150/217 (69.12%), Postives = 164/217 (75.58%), Query Frame = 1
Query:    1 MKVGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSKESRRALLRANTAREKLA 651
            M V HD S YEVQ   VKSRESTRR+A  F  GDVRKVAD+ARV+VIC TPEALKEAYLAI+ L    VL + NGF SDWMP GYR VKLNPVVNEHLCEIQL LR+FF L+G QHA+YE+ARDL VTT MR E LF  LS  VTKEML LAG NWRG+GY LPDLQ AAG+YDLA    +Q L DAE + RE ED  SKESR AL R N AR +LA
Sbjct:  118 MNVAHDMSKYEVQFVDVKSRESTRRKASRFCDGDVRKVADIARVTVICTTPEALKEAYLAIMELPTQQVLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDLFETLSAKVTKEMLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQALTDAENEVREVEDHDSKESRWALDRENEARSRLA 334          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: A0A6H5K147_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K147_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 4.920e-81
Identity = 141/217 (64.98%), Postives = 164/217 (75.58%), Query Frame = 1
Query:    4 KVGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGD-VLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSKESRRALLRANTAREKLA 651
            K+ HDS  + VQ   VKSR+ TR +AR    GDVRKVAD+ARV+V+C TPEALKE Y AI GL +   VLRV NGF SDWMP GYR VK+NPVVN HLCEIQL LR+FF L+G QHA+Y++AR+L V   +RAE+L+ NLS +VTKEM+RLAG NWRG+GYCLPDLQ AAGQYDL      Q+L DAE K    ED  SKESRRALLR NTAR +LA
Sbjct:  215 KIAHDSCKFVVQYVDVKSRDRTREKARKSCGGDVRKVADMARVTVVCATPEALKEVYSAITGLPKPHHVLRVKNGFNSDWMPSGYRDVKVNPVVNNHLCEIQLQLREFFALKGGQHAVYKWARELNVVADLRAEYLYKNLSIEVTKEMMRLAGQNWRGTGYCLPDLQVAAGQYDLVEKDLGQRLTDAERKTHGVEDHGSKESRRALLRLNTARARLA 431          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: D7FH93_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH93_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 3.240e-76
Identity = 124/181 (68.51%), Postives = 143/181 (79.01%), Query Frame = 1
Query:    4 KVGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQ 546
            KV HDSS YEVQ   VKSRESTRR+A   + GDVRKVAD+ARV++IC  PEALKEAY +I+ + E  VLR+ NGF SDWMP GYR VKLNPVVNEHLCEIQL LR+FF L+G QH +Y++ARDL VTT MR+E L  NLSP+V+KEML LAG NWRG+ Y LPDLQ AAGQYDLA    +Q
Sbjct:  118 KVAHDSSKYEVQRAEVKSRESTRRKASREHDGDVRKVADMARVTLICANPEALKEAYSSIMEMPEQHVLRIKNGFNSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHEVYKWARDLNVTTGMRSEDLIKNLSPEVSKEMLHLAGENWRGTAYVLPDLQLAAGQYDLAEKSHRQ 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: A0A6H5JHK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK0_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 2.220e-74
Identity = 117/180 (65.00%), Postives = 141/180 (78.33%), Query Frame = 1
Query:    7 VGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQ 546
            +   + + EV C  VKSR ST+R+A   Y GDVRKVAD+ARVSVIC+ PEALK AYLAI+   +GDVLRV+NGF SDWMP GYR VK+NPVV+EHLCEIQL LR+FF L+G QHA+YE+ARDL+VTT MRAE+LF  LS ++T+EM+ LA  NW G+G  LP LQ AAGQYD A  GF+Q
Sbjct:  119 IAKHTGECEVHCAEVKSRASTQRKASKSYGGDVRKVADMARVSVICDNPEALKRAYLAIVESFQGDVLRVANGFNSDWMPSGYRDVKVNPVVDEHLCEIQLHLREFFTLKGGQHAVYEWARDLKVTTIMRAENLFEFLSREITEEMIGLAERNWHGTGRFLPRLQLAAGQYDQAEEGFRQ 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 2.800e-74
Identity = 129/212 (60.85%), Postives = 159/212 (75.00%), Query Frame = 1
Query:    1 MKVGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSKESRRALLRANTA 636
            + +  D+   +V C  VKSR ST+R+AR  Y GDVRKV D+ARVSVIC+TPEALK AYLAI+   +GDVLRV+NGF SDWMP GYR VK+NPVVNEH+CEIQL LR+FF L+  QHA+YE+ARDL+VTT +RAE+LF  LS D+T+EM+RLA  NW G+G  LP LQ  AGQYD A  G++Q+L +AE   R  ED  + ESR A LR+  A
Sbjct: 1544 VDIAKDTGGCQVHCAEVKSRASTQRKARKSYDGDVRKVTDMARVSVICDTPEALKRAYLAIVESFQGDVLRVANGFNSDWMPSGYRDVKVNPVVNEHICEIQLHLREFFTLKSDQHAVYEWARDLKVTTMLRAENLFDFLSRDITEEMIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGYRQKLSEAEDNRRGVEDNGNTESREASLRSAKA 1755          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: D7FGT0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT0_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 6.870e-74
Identity = 128/202 (63.37%), Postives = 154/202 (76.24%), Query Frame = 1
Query:   31 EVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSKESRRALLRANTA 636
            +VQC  VKSR ST+R+AR  Y  DVRKVAD+ARVSVIC+TPE  K AYLAI+   +GDVLRV+NGF SDWMP GYR VK+NPVVNEHLCEIQL L  FF L+  QHA+YE+ARDL+VTT +RAE+LF  LS D+T+EM+RLA  NW G+G  LP LQ  AGQYD A  GF+Q+L +AE   R  ED+ +KESR+  LR+  A
Sbjct:  127 QVQCAEVKSRASTQRKARKSYGADVRKVADMARVSVICDTPETFKRAYLAIVESFQGDVLRVANGFNSDWMPSGYRDVKVNPVVNEHLCEIQLHLHDFFTLKSDQHAVYEWARDLKVTTMLRAENLFDFLSRDITEEMIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGFRQELSEAEDNKRGVEDKDNKESRKKSLRSAKA 328          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 7.510e-74
Identity = 131/214 (61.21%), Postives = 156/214 (72.90%), Query Frame = 1
Query:    7 VGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSKESRRALLRANTAREKL 648
            +  D   YEVQ   VKSREST+R+ R FY GDVRKVAD+ARVSVIC TPE L+  Y  I+G L  DV RV+NGF +DWMPGGYR VK+NPVVNEHLCEIQL L  F +L+  QHA+YE+ARDL+VT+ MRA  LFS LS +VT+EM+RLA   W  +GYCLP+L  A+GQYD A  G +QQL +AE   +  ED  S +SRRALL  NTAR  L
Sbjct:  120 LADDWGRYEVQHVEVKSRESTQRKVRRFYGGDVRKVADMARVSVICLTPEDLQHVYSDIMGSL--DVRRVTNGFNNDWMPGGYRDVKMNPVVNEHLCEIQLHLGDFSVLKSDQHAVYEWARDLKVTSKMRATDLFSTLSREVTEEMIRLARQGWFRTGYCLPELLLASGQYDQAEEGLRQQLSEAENDKQGVEDDDSNKSRRALLGVNTARSNL 331          
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.650e-70
Identity = 123/203 (60.59%), Postives = 154/203 (75.86%), Query Frame = 1
Query:    7 VGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNTPEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCEIQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLRLAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSKESRRA 615
            +   + + EV C  VKSR  T+R+AR  Y GDVRKVAD+AR+SVIC+ P+ALK AYLAI+   +GDVLRV+NGF SDWMP GYR VK+NPVV++HLCEIQL LR+FF L+ SQHA+YE+ARDL+VTT +RAE+LF  LS ++T+EM+ LA  NW G+G  LP LQ AAGQYD A  GF+Q+L +A+   R  ED  S ESR A
Sbjct:  119 IAEHTGECEVHCAEVKSRAITQRKARKSYGGDVRKVADMARISVICDNPQALKRAYLAIVESFQGDVLRVANGFNSDWMPSGYRDVKVNPVVDDHLCEIQLHLREFFTLKSSQHAVYEWARDLKVTTIVRAENLFGVLSREITEEMIGLAQRNWHGTGRFLPRLQLAAGQYDQAEKGFRQKLSEADNNERGEEDNGSTESREA 321          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1293.1786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSC7_9PHAE4.710e-9268.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9V8_9PHAE9.520e-9068.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L3_ECTSI3.230e-8769.12Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5K147_9PHAE4.920e-8164.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH93_ECTSI3.240e-7668.51Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5JHK0_9PHAE2.220e-7465.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHN5_9PHAE2.800e-7460.85CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGT0_ECTSI6.870e-7463.37TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KZG4_9PHAE7.510e-7461.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXH0_ECTSI1.650e-7060.59Tetratricopeptide repeat containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1293contigE-siliculosus-1a_F_contig1293:10824..12778 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size651
Model size653
Exons3
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03019,ko04812
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.C
EggNOG OGsCOG0457@1,KOG1840@2759
EggNOG free text desc.determination of stomach left/right asymmetry
KEGG Pathwayko05132,map05132
KEGG koko:K10407
Seed eggNOG ortholog2880.D7G1L3
Seed ortholog evalue1.3e-74
Seed ortholog score286.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1293.1786.1prot_E-siliculosus-1a_F_contig1293.1786.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1293 10824..12778 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927813.4020977-CDS-E-siliculosus-1a_F_contig1293:10823..110211622927813.4020977-CDS-E-siliculosus-1a_F_contig1293:10823..11021Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1293 10824..11021 +
1696318691.0557098-CDS-E-siliculosus-1a_F_contig1293:10823..110211696318691.0557098-CDS-E-siliculosus-1a_F_contig1293:10823..11021Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1293 10824..11021 +
1622927813.4117-CDS-E-siliculosus-1a_F_contig1293:12192..125401622927813.4117-CDS-E-siliculosus-1a_F_contig1293:12192..12540Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1293 12193..12540 +
1696318691.0652308-CDS-E-siliculosus-1a_F_contig1293:12192..125401696318691.0652308-CDS-E-siliculosus-1a_F_contig1293:12192..12540Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1293 12193..12540 +
1622927813.420308-CDS-E-siliculosus-1a_F_contig1293:12673..127781622927813.420308-CDS-E-siliculosus-1a_F_contig1293:12673..12778Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1293 12674..12778 +
1696318691.072672-CDS-E-siliculosus-1a_F_contig1293:12673..127781696318691.072672-CDS-E-siliculosus-1a_F_contig1293:12673..12778Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1293 12674..12778 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1293.1786.1

>prot_E-siliculosus-1a_F_contig1293.1786.1 ID=prot_E-siliculosus-1a_F_contig1293.1786.1|Name=mRNA_E-siliculosus-1a_F_contig1293.1786.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=217bp
MKVGHDSSDYEVQCTGVKSRESTRRQARAFYSGDVRKVADLARVSVICNT
PEALKEAYLAIIGLLEGDVLRVSNGFISDWMPGGYRGVKLNPVVNEHLCE
IQLSLRKFFMLRGSQHALYEFARDLEVTTHMRAEHLFSNLSPDVTKEMLR
LAGLNWRGSGYCLPDLQFAAGQYDLANNGFQQQLRDAEYKAREFEDQTSK
ESRRALLRANTAREKLA
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mRNA from alignment at E-siliculosus-1a_F_contig1293:10824..12778+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1293.1786.1 ID=mRNA_E-siliculosus-1a_F_contig1293.1786.1|Name=mRNA_E-siliculosus-1a_F_contig1293.1786.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1955bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1293:10824..12778+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGGTTGGACACGACTCCAGCGACTACGAGGTTCAGTGCACGGGCGT CAAGTCACGAGAAAGTACGCGACGACAGGCCCGCGCGTTCTATTCTGGGG ATGTCAGAAAGGTTGCTGACTTGGCTAGAGTGTCTGTGATCTGCAACACA CCGGAGGCCTTGAAAGAGGCATACTTGGCGATAATCGGATTGCTGGAGGT GAGTAGGATAGTCACATTCGCAGACCGCCTGGAAGCGGGGCCGCGCACAC GAGTTCGCTAACTTTCATTTTATTTTGAGATAACCTCGTGATAGGAAATG GTATCATCGAAGAGGCCTCATCGTGCTCGTTCGGTTTGTGTAAGTAGTAA TCGTGGAAAAAAACCTTCTGCTTGGGAGTTTACGTGTCTTATACCAGATG GTGCGTAAGTTTGTTTACTACCCCCCGACTTGGTACACCATTTGCCGGTG GTATCTCCCCTTGGGTTGGTGGTACTCCCTTAAGCTGGCGGAACAGGAGC TTTAGTTTTCCCGATGACCCCAACCCTATTAGCACCAAACGCCTCCGATA CTCCCAAGAGCTGGAACTCATTCTCCATTTTGACCAGTTGCATCGCAGCG CGTTCTGCCATTCGATTCCTAAGCTCTGATGCACCTACGTGGTGAACGAT TGTCTCCGTCCACAAAACAAAGTTACGATTGCACCCGTCGCGTCAGCAAG AAAAGCCACATTGACTTGGTGGTCGACCCGCCACGCTTCAACCATCATTT GTTTGACGGGGCGGGTCTATATTCAACTTTGTCCGTCCAATTTCCCACCC CGCGAGCCCGCCATCTTCCAGTTGGAGCCTCTAGTATTGATTTCGCTCAG GCGTGCAGGCCGTGTAATTTACACGGATACCTCCGGACATAACCCAGACG TGCGTAGGTGTTGATATTTTGAACGTGGTTAGGGTTTCTTTCACACTCGA CGACAAGCCAAGATCTGGTGATGTTGGAGGGCACACAGATGGTGAGTAAT CAGCCCCAGGGTTCCGCGTGGCGCGTGGGCACACCACCACAGATAGTCAG CTCTTTGGCGTCTGTGCGAGTCTCTTGTTGTATGAGCTCAACAGCAGCAC GAAGACGTGCCCGAAATATTCACCCACCGTGTTTAATGAAAACGTTCCCT GGCAATATAAATACAATATATTTAGCGGTTGTAGCAAAAAACGTTTTGCC GTCCAAGCTAATCTAGGTAATTGAAGTTTTTGTCATTTCGCTAGATGACC CCTGTCCATACTATCAGCGGATTGTCTCCGAGAACTACCCTTCCTTGAGC ATCATTTGACCGTCCTCGACAGTAATGAACATCGCCAAGTGCATGATTCT CCAACCTCATTTCATGCAGGGAGATGTCTTGCGGGTGTCAAACGGCTTCA TCTCCGACTGGATGCCTGGGGGTTATAGGGGCGTGAAGCTGAACCCCGTC GTGAACGAGCACCTATGTGAGATTCAGCTTTCCCTCCGCAAGTTCTTCAT GTTAAGAGGCAGCCAACATGCCTTGTACGAGTTTGCTCGGGACCTCGAGG TAACGACGCATATGCGCGCTGAACATCTGTTCAGCAATCTCTCCCCCGAC GTTACGAAGGAGATGTTGCGCCTGGCTGGGCTGAACTGGCGTGGAAGTGG GTACTGTCTACCGGACCTTCAGTTCGCTGCTGGCCAATACGATCTGGCCA ACAATGGCTTCCAACAGGTGCGCTTTGGGACTTGCAGTTGGAGATCTTTT TTGTGTTTGCACATTTTCCGTGTTGGGGAACTTCAATAAACCCTTCTTGC ATCTACAACAGAGTCTTGTGCTTACGATTTGTGCTCCGTAAACGTACCAG CAACTTCGAGATGCCGAGTACAAAGCTCGGGAGTTTGAAGACCAAACCAG CAAGGAGTCGAGACGGGCCTTGCTCCGGGCAAACACGGCCAGGGAAAAAC TCGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1293:10824..12778+

>mRNA_E-siliculosus-1a_F_contig1293.1786.1 ID=mRNA_E-siliculosus-1a_F_contig1293.1786.1|Name=mRNA_E-siliculosus-1a_F_contig1293.1786.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1302bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1293:10824..12778+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGGTTGGACACGACTCCAGCGACTACGAGGTTCAGTGCACGGGCGT
CAAGTCACGAGAAAGTACGCGACGACAGGCCCGCGCGTTCTATTCTGGGG
ATGTCAGAAAGGTTGCTGACTTGGCTAGAGTGTCTGTGATCTGCAACACA
CCGGAGGCCTTGAAAGAGGCATACTTGGCGATAATCGGATTGCTGGAGAT
GAAGGTTGGACACGACTCCAGCGACTACGAGGTTCAGTGCACGGGCGTCA
AGTCACGAGAAAGTACGCGACGACAGGCCCGCGCGTTCTATTCTGGGGAT
GTCAGAAAGGTTGCTGACTTGGCTAGAGTGTCTGTGATCTGCAACACACC
GGAGGCCTTGAAAGAGGCATACTTGGCGATAATCGGATTGCTGGAGGGAG
ATGTCTTGCGGGTGTCAAACGGCTTCATCTCCGACTGGATGCCTGGGGGT
TATAGGGGCGTGAAGCTGAACCCCGTCGTGAACGAGCACCTATGTGAGAT
TCAGCTTTCCCTCCGCAAGTTCTTCATGTTAAGAGGCAGCCAACATGCCT
TGTACGAGTTTGCTCGGGACCTCGAGGTAACGACGCATATGCGCGCTGAA
CATCTGTTCAGCAATCTCTCCCCCGACGTTACGAAGGAGATGTTGCGCCT
GGCTGGGCTGAACTGGCGTGGAAGTGGGTACTGTCTACCGGACCTTCAGT
TCGCTGCTGGCCAATACGATCTGGCCAACAATGGCTTCCAACAGGGAGAT
GTCTTGCGGGTGTCAAACGGCTTCATCTCCGACTGGATGCCTGGGGGTTA
TAGGGGCGTGAAGCTGAACCCCGTCGTGAACGAGCACCTATGTGAGATTC
AGCTTTCCCTCCGCAAGTTCTTCATGTTAAGAGGCAGCCAACATGCCTTG
TACGAGTTTGCTCGGGACCTCGAGGTAACGACGCATATGCGCGCTGAACA
TCTGTTCAGCAATCTCTCCCCCGACGTTACGAAGGAGATGTTGCGCCTGG
CTGGGCTGAACTGGCGTGGAAGTGGGTACTGTCTACCGGACCTTCAGTTC
GCTGCTGGCCAATACGATCTGGCCAACAATGGCTTCCAACAGCAACTTCG
AGATGCCGAGTACAAAGCTCGGGAGTTTGAAGACCAAACCAGCAAGGAGT
CGAGACGGGCCTTGCTCCGGGCAAACACGGCCAGGGAAAAACTCGCCCAA
CTTCGAGATGCCGAGTACAAAGCTCGGGAGTTTGAAGACCAAACCAGCAA
GGAGTCGAGACGGGCCTTGCTCCGGGCAAACACGGCCAGGGAAAAACTCG
CC
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