mRNA_E-siliculosus-1a_F_contig10187.176.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: K3W821_GLOUD (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W821_GLOUD) HSP 1 Score: 251 bits (642), Expect = 2.000e-75 Identity = 108/156 (69.23%), Postives = 134/156 (85.90%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q++V ++L +E +CVPVFL +E+ ++YYN FSND+LWP FHYVPLP++KAGSEKKFD LW+AYK+ANKRFA V+ VY+DGD+VW+HDY LM +P LRK HP C++ WFLHTPFPSSE+YR LPV KQ+L+GLL ADL+GFHTYDYARHFLSAC
Sbjct: 186 QNKVREKLAKEFNCVPVFLSKEIAERYYNDFSNDILWPTFHYVPLPLFKAGSEKKFDFRLWDAYKLANKRFAQAVNQVYRDGDYVWIHDYHLMNLPALLRKRHPRCKIGWFLHTPFPSSEMYRTLPVGKQILEGLLGADLLGFHTYDYARHFLSAC 341
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: A0A5D6Y7E3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7E3_9STRA) HSP 1 Score: 250 bits (638), Expect = 6.250e-75 Identity = 109/156 (69.87%), Postives = 132/156 (84.62%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q++V ++L +E +CVPVFL +E+ +YYN FSND+LWP FHYVPLP++KAGSEKKFD LW+AYK+ANKRFA V+ VY++GD+VWVHDY LM +P LRK HP C + WFLHTPFPSSE+YR LPV KQ+LQGLL ADL+GFHTYDYARHFLSAC
Sbjct: 190 QNKVREKLAQEFNCVPVFLSKEIASRYYNDFSNDILWPTFHYVPLPLFKAGSEKKFDFRLWDAYKLANKRFAQAVNQVYREGDYVWVHDYHLMNLPSLLRKRHPKCTIGWFLHTPFPSSEMYRTLPVGKQILQGLLGADLLGFHTYDYARHFLSAC 345
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: A0A7S2HCQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCQ7_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.220e-74 Identity = 105/156 (67.31%), Postives = 130/156 (83.33%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q+ V L+++H+C+PVFL ++L++KYYNGFSNDVLWPLFHYVPLPMYK SE+KFD LW+AY+ AN++F+ V S+ K D +WVHDY LM++P +LR PN RVAWFLHTPFPSSEIYRILPVR++LL+GLL ADLVGFHTYDYA HFL +C
Sbjct: 92 QESVRDELLKKHNCLPVFLSEDLVNKYYNGFSNDVLWPLFHYVPLPMYKPNSERKFDMQLWKAYQDANRKFSEAVMSICKPTDLIWVHDYHLMRLPADLRNRMPNIRVAWFLHTPFPSSEIYRILPVRRELLEGLLKADLVGFHTYDYASHFLESC 247
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: H3G924_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G924_PHYRM) HSP 1 Score: 235 bits (600), Expect = 8.190e-73 Identity = 98/156 (62.82%), Postives = 130/156 (83.33%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q +V ++L E +CVPVFL +E+ +YYN FSND+LWP+FHYVPLP+++ GSEKKFD W+AYK+ANKRFA V+ VY++GD VWVHDY LM +P LR HP+C++ WFLHTPFP++E+YR+LPV +++L+GLL ADL+GFHTYDYARHF++AC
Sbjct: 56 QSKVREKLAREFNCVPVFLSKEIAARYYNDFSNDILWPIFHYVPLPLFRPGSEKKFDFRQWDAYKLANKRFAQAVNQVYREGDFVWVHDYHLMMLPSLLRSRHPHCKIGWFLHTPFPTAEMYRMLPVGREILEGLLGADLLGFHTYDYARHFIAAC 211
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: A0A8K1CD86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD86_PYTOL) HSP 1 Score: 245 bits (626), Expect = 9.870e-73 Identity = 104/156 (66.67%), Postives = 133/156 (85.26%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q++V ++L +E +CVPVFL +E+ +YYN FSND+LWP+FHYVPLP+++AG EKKFD LW+AYK+ANKRFA V+ VY+DGD+VW+HDY LM +P LRK HP C++ WFLHTPFPS+E++R LPV KQ+L+GLL ADL+GFHTYDYARHFLSAC
Sbjct: 218 QNKVREKLAKEFNCVPVFLSKEIASRYYNDFSNDILWPIFHYVPLPLFRAGDEKKFDFRLWDAYKLANKRFAQAVNQVYRDGDYVWIHDYHLMTLPSLLRKRHPKCKIGWFLHTPFPSAEMFRQLPVGKQILEGLLGADLLGFHTYDYARHFLSAC 373
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: F0Y2I9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I9_AURAN) HSP 1 Score: 238 bits (608), Expect = 2.690e-71 Identity = 110/153 (71.90%), Postives = 126/153 (82.35%), Query Frame = 1 Query: 10 VSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
V++RLM EH C PVFLE +L++ YYNGF NDVLWPLFHYVPLPMY+AG+EKKFD LW+AY AN+RFA V + D VWVHDY LM++P ELR+L P VAWFLHTPFPSSEIYRILP R++LL+GLL ADLVGFHTYDYARHFLSAC
Sbjct: 123 VAERLMREHGCFPVFLEPQLVENYYNGFCNDVLWPLFHYVPLPMYQAGAEKKFDAHLWDAYTEANRRFAEAVM---EGADVVWVHDYHLMRLPLELRRLDPRVAVAWFLHTPFPSSEIYRILPYRRELLEGLLHADLVGFHTYDYARHFLSAC 272
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: A0A3M6VP07_9STRA (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP07_9STRA) HSP 1 Score: 234 bits (597), Expect = 6.150e-71 Identity = 98/156 (62.82%), Postives = 129/156 (82.69%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q +V ++L E +CVPVFL +E+ +YYNGFSND+LWP+FHYVPLP+++ G+EKKFD W+AYK+ANKRFA V+ VY +GD VWVHDY LM +P LR HP+C++ WFLHTPFP++E+YR+LPV +++L+GLL ADL+GFHTYDYARHF+ AC
Sbjct: 238 QGKVREKLAREFNCVPVFLSKEIAARYYNGFSNDILWPIFHYVPLPLFRPGTEKKFDFRQWDAYKLANKRFAQAVNQVYHEGDCVWVHDYHLMMLPSLLRSRHPHCKIGWFLHTPFPTAEMYRMLPVGREILEGLLGADLLGFHTYDYARHFIEAC 393
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: A0A024FY71_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FY71_9STRA) HSP 1 Score: 237 bits (605), Expect = 3.090e-70 Identity = 103/156 (66.03%), Postives = 129/156 (82.69%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
QD+V ++L +E +C+PVFL +EL +YYN FSND+LWP+FHYVPLPM++ GSEKKFD W+AYK+ANKRFA V VY++GD VWVHDY LM +P LRK HP +AWFLHTPFP+S++YR+LPV + +L+GLL ADL+GFHTYDYARHFLSAC
Sbjct: 224 QDQVREKLAKEFNCLPVFLSKELAARYYNDFSNDILWPIFHYVPLPMFRPGSEKKFDFRPWDAYKLANKRFAQAVHQVYREGDFVWVHDYHLMMLPSLLRKRHPKATIAWFLHTPFPASDVYRMLPVGQPILRGLLGADLLGFHTYDYARHFLSAC 379
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: F0W5R5_9STRA (Alpha putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5R5_9STRA) HSP 1 Score: 237 bits (605), Expect = 3.170e-70 Identity = 104/156 (66.67%), Postives = 128/156 (82.05%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q++V ++L E +CVPVFL +EL +YYN FSND+LWP+FHYVPLPM++ GSEKKFD WEAYK+ANKRFA V VY++GD VWVHDY LM +P LRK HP +AWFLHTPFP+S++YR+LPV + +L+GLL ADL+GFHTYDYARHFLSAC
Sbjct: 227 QEQVREKLANEFNCVPVFLPKELAARYYNDFSNDILWPIFHYVPLPMFRPGSEKKFDFRPWEAYKLANKRFAQAVHQVYREGDFVWVHDYHLMMLPSLLRKRHPKATIAWFLHTPFPASDVYRMLPVGQPILRGLLGADLLGFHTYDYARHFLSAC 382
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Match: A0A225VGT2_9STRA (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VGT2_9STRA) HSP 1 Score: 237 bits (605), Expect = 5.290e-70 Identity = 99/156 (63.46%), Postives = 130/156 (83.33%), Query Frame = 1 Query: 1 QDEVSQRLMEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNGLWEAYKVANKRFANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQGLLAADLVGFHTYDYARHFLSAC 468
Q +V ++L +E +CVPVFL +E+ +YYN FSND+LWP+FHYVPLP+++ GSEKKFD W+AYK+ANKRFA V+ VY++GD VWVHDY LM +P LR HPNC++ WFLHTPFP++E+YR+LPV +++L+GLL ADL+GFHTYDYARHF+ AC
Sbjct: 231 QSKVREKLAKEFNCVPVFLSKEIAARYYNDFSNDILWPIFHYVPLPLFRPGSEKKFDFRQWDAYKLANKRFAQAVNQVYREGDFVWVHDYHLMMLPSLLRSRHPNCKIGWFLHTPFPTAEMYRMLPVGREILEGLLGADLLGFHTYDYARHFIGAC 386 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10187.176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10187.176.1 >prot_E-siliculosus-1a_F_contig10187.176.1 ID=prot_E-siliculosus-1a_F_contig10187.176.1|Name=mRNA_E-siliculosus-1a_F_contig10187.176.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=148bp MEEHSCVPVFLEQELMDKYYNGFSNDVLWPLFHYVPLPMYKAGSEKKFDNback to top mRNA from alignment at E-siliculosus-1a_F_contig10187:380..1980- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10187.176.1 ID=mRNA_E-siliculosus-1a_F_contig10187.176.1|Name=mRNA_E-siliculosus-1a_F_contig10187.176.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1601bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10187:380..1980- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10187:380..1980- >mRNA_E-siliculosus-1a_F_contig10187.176.1 ID=mRNA_E-siliculosus-1a_F_contig10187.176.1|Name=mRNA_E-siliculosus-1a_F_contig10187.176.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=888bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10187:380..1980- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |