mRNA_E-siliculosus-1a_F_contig1284.1740.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: A0A6H5KMQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ6_9PHAE) HSP 1 Score: 322 bits (824), Expect = 2.210e-103 Identity = 162/186 (87.10%), Postives = 170/186 (91.40%), Query Frame = 1
Query: 1 MLLLLSVLLAFGAHGKTINGPANATPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELAVACPKLGFNAAALSHDGSMTASWMAFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASKM 558
MLLLLSVLL FGAHG INGPANATPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELAVACPKLGFNAA L +DGSMTASW+AFRQQ LRLAPSCS MEWEKRCPPGATMLLAEKRRG CRAAGCVAVG ELND + D++EILRAVTAQQTALL+AAKPA PK+FYQHV G+QRAYGKA KM
Sbjct: 5 MLLLLSVLLTFGAHGMAINGPANATPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELAVACPKLGFNAATLHNDGSMTASWLAFRQQADLRLAPSCSPMEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELND--DNDDNEILRAVTAQQTALLKAAKPAMPKSFYQHVAGRQRAYGKARKM 188
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: D7G4D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D4_ECTSI) HSP 1 Score: 303 bits (775), Expect = 8.040e-97 Identity = 155/181 (85.64%), Postives = 164/181 (90.61%), Query Frame = 1
Query: 19 VLLAFGAHGKTINGPANA-TPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELAVACPKLGFNAAALSHDGSMTASWMAFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELNDNKE-QDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 555
+LLAFGAHGK IN PANA TP+DKCC+ALLVEGEAGSLD FGKYRLP PCGGELAVACP+LGFN+AA++ DGSMT SW+AFRQQ LRLAPSC +EWEKRCPPGATMLLAEKRRG CRAAGCVAVG E NDNKE QDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGK K
Sbjct: 1 MLLAFGAHGKGINAPANAITPQDKCCSALLVEGEAGSLDDFGKYRLPPPCGGELAVACPRLGFNSAAMN-DGSMTPSWLAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGEPNDNKEEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKDEK 180
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: A0A6H5KGK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK1_9PHAE) HSP 1 Score: 182 bits (463), Expect = 8.290e-56 Identity = 100/151 (66.23%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 166 GGELAVACPKLGFNAAALSHDGSMTASWMAFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELND----------------------NKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKAS 552
GGE AVACPKLGFNAAA+ HD +MTASW+AF+QQ+ LR A SC EWE RCPPGATMLL EKRRG CRAAGC+A G ELND N E DE EILRAVTAQQTALLQAAKP PKTFYQHV GQQRA G S
Sbjct: 7 GGEPAVACPKLGFNAAAI-HDDAMTASWLAFQQQSGLRAAESCPPTEWEDRCPPGATMLLVEKRRGGCRAAGCIAAGGELNDVRDGSAFPLAVLVCYALVDHGQNNEDDEWEILRAVTAQQTALLQAAKPTLPKTFYQHVAGQQRACGXVS 156
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: D7FRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE6_ECTSI) HSP 1 Score: 194 bits (493), Expect = 1.650e-55 Identity = 100/130 (76.92%), Postives = 107/130 (82.31%), Query Frame = 1
Query: 166 GGELAVACPKLGFNAAALSHDGSMTASWMAFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 555
GGE AVACPKLGFNAAA++ D +MTASW+AF+QQ+ LR A SC EWE RCPPGA MLLAEKRRG CRAAGCVAVG ELNDN + DE EILR VTAQQTALLQAAKP PKTFYQHV GQQRAY K K
Sbjct: 7 GGESAVACPKLGFNAAAINDD-AMTASWLAFQQQSGLRAAESCPPAEWEDRCPPGAIMLLAEKRRGGCRAAGCVAVGGELNDNNKDDEWEILRVVTAQQTALLQAAKPTMPKTFYQHVAGQQRAYAKDEK 135
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: D8LCE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE6_ECTSI) HSP 1 Score: 155 bits (393), Expect = 8.310e-44 Identity = 99/189 (52.38%), Postives = 121/189 (64.02%), Query Frame = 1
Query: 4 LLLLSVLLAFGAHGKTINGPANATPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELA-VACPKLGFNAAALSHDGSMTASWM-AFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELNDNKEQD---ESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 555
L+L VL AHG T + P TPE CCAALLVEGE GSLDA GKYRLP C G + V C LGF H+ +W+ A+R Q +R PSCS +EWE+RCPPGATMLL++KR G C AAGCVA ++ + N QD ++ ILRAVT Q TA L+A KP P++FY HV G +RA+ K K
Sbjct: 6 LVLACVLPLVLAHG-TEDNP-TITPEGDCCAALLVEGEEGSLDAAGKYRLPAICRGVPSPVTCTPLGFTN---DHNMVEEPAWLLAYRSQADIRQHPSCSPVEWEQRCPPGATMLLSKKRGG-CPAAGCVAATAQESVNVGQDVGDDAAILRAVTGQVTARLRAEKPDLPRSFYWHVRGLRRAFDKGPK 188
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: A0A6H5JU04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU04_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.060e-32 Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 1
Query: 166 GGELAVACPKLGFNAAALSHDGSMTASWMAFRQQTAL---RLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELND 411
GGE AVACPKLGFNAAA+ HD +MTASW+AF+QQ+ L R A SC EWE RCPPGATMLLAEKRRG CRAAGC+A G ELND
Sbjct: 7 GGEPAVACPKLGFNAAAI-HDDAMTASWLAFQQQSGLFGLRAAESCPPTEWEDRCPPGATMLLAEKRRGGCRAAGCIAAGGELND 90
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: D7G3D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D5_ECTSI) HSP 1 Score: 131 bits (330), Expect = 4.040e-32 Identity = 77/137 (56.20%), Postives = 95/137 (69.34%), Query Frame = 1
Query: 1 MLLLLSVLLAFG-AHGKTINGPANATPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELA--VACPKLGFNAAALSHDGSMTASWMAFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSE 402
+LL+ +VLL G AHGK + T E+ CC ALLVEGE GSLDA GKY LPT C GE A +ACP+L F + A+S + + +AF+QQ+ LR SCS +EWE+RCPPGATMLL++KR G CRAAGCVA E
Sbjct: 7 LLLVCAVLLVLGQAHGKG----RDPTKEEDCCTALLVEGEEGSLDAAGKYVLPTICRGEPAPAMACPQLWFQSPAISDNDIGEPARLAFQQQSDLRADESCSPLEWEQRCPPGATMLLSKKRGG-CRAAGCVAAAME 138
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: D7G532_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G532_ECTSI) HSP 1 Score: 120 bits (300), Expect = 9.160e-29 Identity = 72/152 (47.37%), Postives = 88/152 (57.89%), Query Frame = 1
Query: 100 LLVEGEAGSLDAFGKYRLPTPCGGELAVACPKLGFNAAALSHDGSMTASWMAFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 555
LL+EG GS GKY+LP C V CP LGF+ A H AS RQQ+ALR PSC+ EWE RCPP +TMLLA + G C A GCV E +DE E+LR +T++ T LQA K K+FY HV G +R++GKA K
Sbjct: 34 LLLEGPVGSKGHDGKYQLPVAC--RDLVGCPSLGFSPQASEHIDIDPAS-ETLRQQSALREDPSCTRAEWEGRCPPSSTMLLASRMAGSCIAEGCVH--RETQSMAGEDEDELLRVITSEVTQRLQAEKRNMTKSFYAHVRGLRRSFGKAQK 180
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: D7FRR6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR6_ECTSI) HSP 1 Score: 104 bits (260), Expect = 9.250e-25 Identity = 67/150 (44.67%), Postives = 84/150 (56.00%), Query Frame = 1
Query: 103 LVEGEAGSLDAFGKYRLPTPCGGELAVACPKLGFNAAALSHDGSMTASWMAFRQQTALRLAPSCSLMEWEKRCPPGATMLLAEKRRGRCRAAGCVAVGSELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKAS 552
L+EG GS GKY+LP C V CP LGFN A H AS A RQQ+ALR SC EWE RCPP +TMLLA + G C AAGCV + + E+LR +T++ T LQA KP ++FY HV G +R + K++
Sbjct: 35 LLEGPVGSKGHDGKYQLPVAC--RDLVGCPSLGFNPQA--HIDIDPAS-EALRQQSALREDSSCPRAEWEGRCPPSSTMLLASRMGGSCIAAGCV---HRETQSMVGGDDELLRVITSEVTERLQAEKPYLTRSFYAHVRGLRRFFAKSN 176
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Match: A0A6H5KH23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH23_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 4.490e-22 Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 1
Query: 1 MLLLLSVLLAFGAHGKTINGPANATPEDKCCAALLVEGEAGSLDAFGKYRLPTP 162
MLLLL VLLAFGAHG+ +NGP NATPEDKCC+ALLVEGEA SLDA GKYRLPTP
Sbjct: 5 MLLLLFVLLAFGAHGQ-VNGPTNATPEDKCCSALLVEGEAASLDASGKYRLPTP 57 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1284.1740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1284.1740.1 >prot_E-siliculosus-1a_F_contig1284.1740.1 ID=prot_E-siliculosus-1a_F_contig1284.1740.1|Name=mRNA_E-siliculosus-1a_F_contig1284.1740.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=187bp MLLLLSVLLAFGAHGKTINGPANATPEDKCCAALLVEGEAGSLDAFGKYRback to top mRNA from alignment at E-siliculosus-1a_F_contig1284:32112..33535- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1284.1740.1 ID=mRNA_E-siliculosus-1a_F_contig1284.1740.1|Name=mRNA_E-siliculosus-1a_F_contig1284.1740.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1424bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1284:32112..33535- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1284:32112..33535- >mRNA_E-siliculosus-1a_F_contig1284.1740.1 ID=mRNA_E-siliculosus-1a_F_contig1284.1740.1|Name=mRNA_E-siliculosus-1a_F_contig1284.1740.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1122bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1284:32112..33535- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |