mRNA_E-siliculosus-1a_F_contig1278.1700.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: A0A6H5KYU3_9PHAE (DSBA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYU3_9PHAE) HSP 1 Score: 442 bits (1138), Expect = 7.800e-152 Identity = 216/220 (98.18%), Postives = 220/220 (100.00%), Query Frame = 1
Query: 112 MAKFNIKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECTKDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEALSS 771
MAKFNIKIFSDNVCPWCFVGKRNLE+AMKQFAAREP+TQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASL+MAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECTKDYLEGKEGQ+EVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEALSS
Sbjct: 1 MAKFNIKIFSDNVCPWCFVGKRNLETAMKQFAAREPSTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLAMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECTKDYLEGKEGQEEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEALSS 220
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: B7ZGN0_9PHAE (DSBA oxidoreductase n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN0_9PHAE) HSP 1 Score: 361 bits (927), Expect = 6.780e-120 Identity = 170/220 (77.27%), Postives = 195/220 (88.64%), Query Frame = 1
Query: 112 MAKFNIKIFSDNVCPWCFVGKRNLESAMKQFAAREPTT--QSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECTKDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEAL 765
M KFN+K+ SDNVCPWC+VGKRNLESAMKQFA +PT Q PPVFDVRWKPFFLN+++PETSE PI EYLEKKYGKGAGSRMA +L AG++TGI FNNDR+VHNTIRSHRLVR AD Q KGG+MI+QLFH YFE+G+NIAD DVLLE+A+KAGVECTK+YLEGKEGQQEV++EY+ G+ G+SGVPY+I+SREGSKATVPLSG QPP AFVEAFEAL
Sbjct: 1 MPKFNVKVISDNVCPWCYVGKRNLESAMKQFATSQPTEKEQEPPVFDVRWKPFFLNVKSPETSEEPIQEYLEKKYGKGAGSRMAVALERAGKSTGINFNNDRRVHNTIRSHRLVRLADQQEKGGDMIEQLFHGYFEEGKNIADSDVLLEIAQKAGVECTKEYLEGKEGQQEVLNEYQKGVQTQGVSGVPYYIISREGSKATVPLSGAQPPEAFVEAFEAL 220
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: A0A835YGU7_9STRA (Protein disulfide isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGU7_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.440e-52 Identity = 98/210 (46.67%), Postives = 132/210 (62.86%), Query Frame = 1
Query: 139 SDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVEC-TKDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEAL 765
S VCPWCF+GKR LE+A+++ Q+ WKPFFL+ +P+ S +PI +L +KYG AG+RMAASL+ AGE GI+F DR V NTI SHRLV A QGK +I+ LF YFEQG ++ VD L+ +AE AG+ + YLE E + V+ E GI+GVP+F+++R+G+K + LSG QP F EAF+AL
Sbjct: 17 SPPVCPWCFIGKRRLEAAIRERGLGPKDVQT------TWKPFFLDANSPKDSGIPIGVHLRQKYGAQAGARMAASLAAAGEENGIKFKEDRTVQNTIMSHRLVHLAGKQGKQDAVIEALFSGYFEQGAKLSSVDTLVRIAETAGISGDVRAYLESGEDEDVVMREAFDSARRLGITGVPFFVIARDGNKERLTLSGAQPVDVFDEAFDAL 220
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: B3SBG0_TRIAD (DSBA domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3SBG0_TRIAD) HSP 1 Score: 150 bits (378), Expect = 2.340e-38 Identity = 90/229 (39.30%), Postives = 130/229 (56.77%), Query Frame = 1
Query: 100 LASVMAKFNIKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRM---AASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVEC--TKDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSK--ATVPLSGGQPPAAFVEAFEAL 765
+ S I I SD +CPWCFVGKR+LE+AMK F E T + FD+ WKPF LN PE +P+ EYL ++YG+ +SL AG G+ F+++RK N+IRSH L+ +A + K ++ + LF YF G NI DV VLL+ A++ G++ K L+ KE ++++I E K N I GVP+F++S G + +PL G QP F F ++
Sbjct: 1 MGSTKPTIKIDITSDTMCPWCFVGKRHLETAMKDF---ESTFE----FDIEWKPFLLNSNTPEEG-IPVLEYLAQRYGQQVADDARNGTSSLIAAGRKVGLNFDSNRKFVNSIRSHCLLDYARTEKKQNQLAELLFQRYFIDGNNINDVKVLLDCAKEIGLKAEEAKKSLQDKERRKKIIEEAKVATQNQ-IHGVPHFVISLIGDQHGKAMPLHGCQPIEMFRRVFTSI 220
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: A0A3N4TK56_9STAP (Putative DsbA family dithiol-disulfide isomerase n=7 Tax=Salinicoccus TaxID=45669 RepID=A0A3N4TK56_9STAP) HSP 1 Score: 145 bits (365), Expect = 1.950e-36 Identity = 82/214 (38.32%), Postives = 126/214 (58.88%), Query Frame = 1
Query: 127 IKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGA--GSRMAASLSMAGEATGIRFNNDRKV-HNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVE--CTKDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEA 753
I+I+SD CP+C++GKRN E+ ++QF+ ++ DV K F L+ AP + + E L KKYGK M +S A EA G+ FN D + NT+ +HRL++ A+G+GK GE ++ L+HAYF +G N+AD +VLL++AE G+ + L + ++ VIS+ G GVP+F+++R+ +SG QPP AF+EA
Sbjct: 3 IEIWSDIGCPFCYIGKRNFEAGLEQFSGKDEV-------DVIHKSFRLDPSAPMAPDASMAELLAKKYGKSLEEAKEMNRQVSGAAEAAGLEFNLDAVIPSNTMDAHRLIKMAEGEGKDGEALEHLYHAYFTEGSNVADAEVLLDIAETLGMNRGTVEQKLASNDYKEAVISDQNEAT-RLGAQGVPFFVINRK-----YGVSGAQPPEAFLEA 203
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: UPI000564DB9A (DsbA family oxidoreductase n=1 Tax=Salinicoccus luteus TaxID=367840 RepID=UPI000564DB9A) HSP 1 Score: 143 bits (361), Expect = 7.200e-36 Identity = 82/216 (37.96%), Postives = 129/216 (59.72%), Query Frame = 1
Query: 127 IKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGA--GSRMAASLSMAGEATGIRFNNDRKV-HNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECT--KDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFE 759
I+I+SD CP+C++GKRN E+ +++F +++ +V K F L+ A + + E L KKYGK +M +S A EA G+ FN D V NT+ +HRL++ A+ +GK GE +D L+HAYF +GRN+A +V+LE+A+ G++ T ++ L + ++ VISE G GVP+F+++R+ +SG QPP AF+EA E
Sbjct: 3 IEIWSDIGCPFCYIGKRNFEAGLERFESKDEV-------NVVHKSFRLDPAASTEPDQSMAELLAKKYGKSLEEARQMNRQVSRAAEAAGLEFNMDAVVPSNTMDAHRLIKMAEAEGKDGEALDHLYHAYFTEGRNVARAEVILEIAQTIGMDTTAVEEMLGSNDYKETVISEQNEAT-RLGAQGVPFFVINRK-----YGVSGAQPPEAFLEAIE 205
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: A0A6A6V021_9PLEO (DSBA oxidoreductase n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6V021_9PLEO) HSP 1 Score: 143 bits (361), Expect = 7.400e-36 Identity = 86/222 (38.74%), Postives = 123/222 (55.41%), Query Frame = 1
Query: 112 MAKFNIKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGE--MIDQLFHAYFEQGRNIADVDVLLELAEKAGVEC--TKDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEAL 765
M FNI I SDNVCPWC++GK+ LESA+ + P++ F W PF+LN +AP+TS + Y K+G + + GE GI F K NT SHRLV+ + E +I+ LF AYFE+ ++I D +VL+EL KAG+E ++++E +G +EV E K + G+SGVP F+++ + G Q PAAFV+ FE L
Sbjct: 1 MTHFNISIVSDNVCPWCYIGKKRLESAITLYKKSHPSSND--TFSTSWHPFYLNPDAPKTS-VDKRSYYASKFGAERTEMIWERMINLGEQEGINFVLGGKTGNTRDSHRLVQLGKTKSAAMETRVIEVLFEAYFEKSQDITDKNVLVELGVKAGLEEKEVREWMESDKGGKEVDREVKEA-YERGVSGVPNFVIN-----GRFEIGGAQEPAAFVQLFERL 213
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: A0A433CYQ7_9FUNG (DSBA domain-containing protein n=3 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CYQ7_9FUNG) HSP 1 Score: 143 bits (361), Expect = 8.960e-36 Identity = 89/227 (39.21%), Postives = 125/227 (55.07%), Query Frame = 1
Query: 127 IKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRM------------AASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVE--CTKDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEAL 765
I I SD +CPWCFVGKR LE+A+ Q P T+ F+ W P+ L+ P+ S Y+ KK+G+ +M A+S G+A I FN +V NT SHRLV +A QGK EM+++LF YFEQ R++ADV+ L E+A K G++ T +L+ EG+ EV +E + ISGVP+F++ + LSG QPP FVE F+ +
Sbjct: 22 IDIVSDTICPWCFVGKRRLETAIAQAIKAHPGTK----FETVWHPYELDPTLPKESVDKHANYV-KKFGEERMKQMLPYMENIGRLLIASSPQSTGKAENISFNFGGRVGNTTDSHRLVWWATKQGKQDEMVEELFRHYFEQERDVADVETLAEIARKVGLDRNATLAFLQSDEGRAEVKAEIYRNM-GKSISGVPHFMIDKR-----YTLSGAQPPETFVELFDEI 237
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: A0A6G1FUU3_9PEZI (DSBA oxidoreductase n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1FUU3_9PEZI) HSP 1 Score: 142 bits (358), Expect = 1.370e-35 Identity = 80/222 (36.04%), Postives = 125/222 (56.31%), Query Frame = 1
Query: 112 MAKFNIKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECT--KDYLEGKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEALSS 771
M +FNI++ SDNVCPWC++GK+ L+ A++Q+ ++ P +Q +++ WKPF+LN AP+ S + EY + K+G + A+LS G + GI + + NT SHRLV+ +G G +I++LF YFE ++I L E AG++ +D+L +G +EV E + + G+SGVP F V + G Q P AFV+ FE + S
Sbjct: 1 MTQFNIQVVSDNVCPWCYMGKKRLDKAIQQYTSKYPDSQD--TWNITWKPFYLNPHAPKAS-VDKAEYYQSKFGPERTRGIFANLSQLGLSEGIHYKFGGRTGNTRDSHRLVQLGRERGLGTRVIEELFKGYFENEQDITSHGFLQTAGEAAGLDAAEVRDWLGSDKGGKEVDREVQEA-YEEGVSGVPNFTVGG------YEIPGAQEPVAFVKLFERIKS 212
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Match: A0A2T7C3Y8_9POAL (DSBA domain-containing protein n=5 Tax=Panicum TaxID=4539 RepID=A0A2T7C3Y8_9POAL) HSP 1 Score: 142 bits (357), Expect = 1.800e-35 Identity = 82/217 (37.79%), Postives = 127/217 (58.53%), Query Frame = 1
Query: 127 IKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLSMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQG--KGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECTKDYLE----GKEGQQEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFE 759
I + SD VCPWCFVGK+NLE AM+Q T+ F+VRW PFFLN +AP+ + +++ + K+G R + ++ G+ ++ NT+ SHRL+ A+ QG K ++++LF +YF QG+ I D VLL++A K G+E ++ LE G + QE +++Y + ISGVP+F+++ + LSGGQPP+ F+ AFE
Sbjct: 12 IDVSSDTVCPWCFVGKKNLERAMEQ-------TKDKYNFEVRWHPFFLNPDAPKEG-IRKSDFYQMKFGPVQFERATSRMTEIFRGLGLEYDMSGLTGNTMDSHRLITLAEHQGYDKQNALVEELFQSYFCQGKYIGDKQVLLDVARKVGIEGAEELLEDPSRGVDEVQEELNKY-----SSAISGVPHFVINGK-----YQLSGGQPPSVFMRAFE 210 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1278.1700.1 >prot_E-siliculosus-1a_F_contig1278.1700.1 ID=prot_E-siliculosus-1a_F_contig1278.1700.1|Name=mRNA_E-siliculosus-1a_F_contig1278.1700.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=221bp MAKFNIKIFSDNVCPWCFVGKRNLESAMKQFAAREPTTQSPPVFDVRWKPback to top mRNA from alignment at E-siliculosus-1a_F_contig1278:27094..30671- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1278.1700.1 ID=mRNA_E-siliculosus-1a_F_contig1278.1700.1|Name=mRNA_E-siliculosus-1a_F_contig1278.1700.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3578bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1278:27094..30671- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1278:27094..30671- >mRNA_E-siliculosus-1a_F_contig1278.1700.1 ID=mRNA_E-siliculosus-1a_F_contig1278.1700.1|Name=mRNA_E-siliculosus-1a_F_contig1278.1700.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1326bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1278:27094..30671- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |