mRNA_E-siliculosus-1a_F_contig1017.169.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 1166 bits (3016), Expect = 0.000e+0 Identity = 582/631 (92.23%), Postives = 586/631 (92.87%), Query Frame = 1 Query: 1 MISQPRLTIKDVCKYINGPLLRDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSG----------------------------------HGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSKEFIEKMRKIQKAHRNILDMETSFLGDQ 1791
MISQPR TIKDVCKYINGPLL+DDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVD LRDDGS DNFDKLRAALGPEGG YSVRFDQAAAAQCE+FHP NKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRK+TEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDG WGYDQFEEQVEDVMDVLEH DPD QIVFEVDHSSG HGKQREDGLHVSNMNVKYGGKQKVLRDSVMTE LGPEEAKMYFANGRWSTKF EGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIR+KEFIEKMRKIQKAHRNILDMETSFLGDQ
Sbjct: 359 MISQPRFTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEYFHPTNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKRTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGCWGYDQFEEQVEDVMDVLEHIDPDKQIVFEVDHSSGPDAKPWTPVXXXXXXXXXXXXXXXXXXXXXXXXXHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGPEEAKMYFANGRWSTKFREGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 989
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 1070 bits (2767), Expect = 0.000e+0 Identity = 547/647 (84.54%), Postives = 556/647 (85.94%), Query Frame = 1 Query: 1 MISQPRLTIKDVCKYINGPLLRDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAAL--------------------------------------------------GPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSKEFIEKMRKIQKAHRNILDMETSFLGDQ 1791
MIS PR+TI+DVCKYINGPLL+DDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGC+YERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVD LRDDGS DNFDKLRAAL GPEGG YSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKK LTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEH DPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEE LGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKD KNA+G+ ++G AGVSDDMHVEKVL ALPDFK ERTAL+HLVESRGHI LS KCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIAL GVVIRS EFIEKMRKIQKAHRNILDMETSFLGDQ
Sbjct: 24 MISPPRVTIEDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCKYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALDAARTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKPLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDTKNARGRSRKG-------------------------AGVSDDMHVEKVLHALPDFKIERTALEHLVESRGHIHLS--KCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALSGVVIRSNEFIEKMRKIQKAHRNILDMETSFLGDQ 643
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 797 bits (2058), Expect = 3.670e-285 Identity = 404/472 (85.59%), Postives = 407/472 (86.23%), Query Frame = 1 Query: 556 NKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKV------------------------------------------------------------LQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSKEFIEKMRKIQKAHRNILDMETSFLGDQ 1791
NKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYD FEEQVEDV+DVLEH DPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTE LG EEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKV LQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRR+INDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIR+KEFIEKMRKIQKAHRNILDMETSFLGDQ
Sbjct: 104 NKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDLFEEQVEDVVDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGLEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVNPFFEWDTPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRRINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 575
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 753 bits (1943), Expect = 1.740e-265 Identity = 384/430 (89.30%), Postives = 389/430 (90.47%), Query Frame = 1 Query: 1 MISQPRLTIKDVCKYINGPLLRDDKE-DLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKA 1287
MISQPR TIK+VCKYINGPLL+DDKE DLSRLHAYQVNLPVSMST HSWMIRLGCRYER TKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVD LRDDGS DNFDKLRAALGPEGG YSV FDQAAAAQCEHFH PNKCRCG+KVHHIGQDESAYKA E W SG RHGFGLPISDADLAAVN+KRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEH DPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLR SVMTEE LGPEEAK+YFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKA
Sbjct: 312 MISQPRFTIKEVCKYINGPLLQDDKEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVCFDQAAAAQCEHFHLPNKCRCGRKVHHIGQDESAYKA---ENGVWF------------------SG----RHGFGLPISDADLAAVNSKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRLSVMTEECLGPEEAKIYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKA 716
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 749 bits (1935), Expect = 1.070e-259 Identity = 394/644 (61.18%), Postives = 459/644 (71.27%), Query Frame = 1 Query: 1 MISQPRLTIKDVCKYINGPLLRDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRG-------------------VRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAK----------------------------GKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSKEFIEKMRKIQKAHRNILDMETSFLGDQ 1791
M +Q RLT+KDV YIN L + DLSRL +YQVNLPVSM+TTHSWMI LGC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+AL QPLWVRVQR L +E+ RLD +K GP DF AEVYDC ++G++CIEFHVD LRD+GS D FD LRA LGPEGG +SVRF++AAA CEHFH P KC+C +KV HIGQDES YKAYAREGKEWV++G VRGLRKKTEGPGEMVS FQDERHGFGLP++D L AVNA+R E+ GK+ LTRSPGLRFL+YGK KDGYWGYD+F+EQ+ +PDMQ+V VLRD+VMT+ LGPEE KMY +NG+WST+F+EGA D KL VG TQTSTFA G+PPP WDAPRKD K A+ K+KEG+EGKAKG +QYLWERGWW +GM+ G++D+ ++EKVLQAL +F++ERT LQ LVESRGHILL SPKCHPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLH NIEKS+C +K+L IGRVRRFARRTRDYCRAYRE L V + + +EKMR QKAHRNIL ME FLG Q
Sbjct: 428 MRTQKRLTVKDVQNYINQWLFANQIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQPLWVRVQRDTLTPKELQRLDGIK--GPAEDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGXXXXXXXXXXXXXXXXXXXVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVV-------------------------------VLRDTVMTKGCLGPEETKMYPSNGKWSTEFTEGAEVYDTKLKVGDTQTSTFAAGSPPPL--WDAPRKDVKVARKAKRXXXXXXXXXXXDEGAADGAGTKPRDKIKEGHEGKAKGSKQYLWERGWWIEGMNASVGIADEKNIEKVLQALTNFESERTELQCLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMCREKHLMIGRVRRFARRTRDYCRAYRETQLGAVDGQGLQLVEKMRDTQKAHRNILKMEPGFLGKQ 1034
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 684 bits (1765), Expect = 8.270e-235 Identity = 376/673 (55.87%), Postives = 433/673 (64.34%), Query Frame = 1 Query: 1 MISQPRLTIKDVCKYINGPLLRDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWD-----------------------------------------------------------APRKDKKNA-----------------KGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSKEFIEKMRKIQKAHRNILDMETSFLGDQ 1791
M +Q RLT+KDV YIN L ++ DLSRL +YQVNLPVSM+TTHSWMI LGC+YERATKSFYTD HEKK+VV YRG+ R+ + R P GD +GS D FD LRA LGPEGG YSVRF++AAA CEHFH P KC+ K+V HIGQDES YKAYAREGKEWV++GV GL KKTEGPGEMVS FQDERHGFGLP++D L AVNA+R E+ GK+ LTRSPGL FL+YGK KDGYWGYD+F+EQ+ +PDMQ+V E+DHSSGH +QREDGLHV NMNVK GGKQ VLRD++MTE LGP+EAKMY +NG+WST+F+EGA D KL VG TQTSTFA G A RK A + K+KEGYEGKAKG +QYLWERGWWK+GM+ G++D+ +VEKVLQAL DF++ERTALQ+LVESRGHILL SPKCHPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLH NIEKS+ +K+LTIGRVRRFARRTRDYCRAYREI L + + +EKMR QKAHRNILDME FLG Q
Sbjct: 362 MRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKGA---------------------------RVHRVPRRSPAGD-------------------------NGSVDRFDALRAELGPEGGHYSVRFEEAAALPCEHFHTPAKCKGNKEVRHIGQDESVYKAYAREGKEWVVQGVPGLWKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLWFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKNGGKQTVLRDTIMTEGCLGPKEAKMYLSNGKWSTEFTEGAEVYDMKLKVGDTQTSTFAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVRKAKRKSNAGAGVGAGDEGAADGAGTKPRDKIKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSM--EKHLTIGRVRRFARRTRDYCRAYREIQLGAADGQGLQLVEKMRNTQKAHRNILDMEPGFLGKQ 978
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 623 bits (1607), Expect = 9.670e-220 Identity = 306/316 (96.84%), Postives = 310/316 (98.10%), Query Frame = 1 Query: 844 KGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSKEFIEKMRKIQKAHRNILDMETSFLGDQ 1791
+GKDGYWGYDQFEEQVEDVMDVLEH DPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEE LGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAV APPPFFEW APRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIE+SLCI KYLTIGRVRRFARRTRDYCRAYREIALRGVVIR+KEFIEKMRKIQKAHRN+LDMETSFLG Q
Sbjct: 65 RGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVCAPPPFFEWHAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEESLCIHKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNMLDMETSFLGFQ 380
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE) HSP 1 Score: 637 bits (1644), Expect = 4.540e-219 Identity = 344/577 (59.62%), Postives = 407/577 (70.54%), Query Frame = 1 Query: 49 NGPLLRDDKEDLSRLHAYQV--------NLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEG-----------------------------KAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRA 1668
+ PLL DD+ + Y+V NLPVSM+TTHSWMI GC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ALRQPLWVRVQR L EE+ RLD +K GP +F AEVYDC ++G++ IEFHVD +RD+ S D FD LRA LGPEGG +S AYAREGKEWV++GVRGLRKKTEGPGEMV FQDERHGFGLP++D L AVNA+R E+ GK+ LT+ P LRFL+Y K +DGY GYD+F+EQ+EDV+DVL +PDMQ+V E+DHSSGH ++REDGLHV NMNVKYGGKQKVLRD+V+TE LGPEE KMY +NG+WST+F EGA D KL VG TQTSTFA G+PPPF+EWDAP KD K A+ K K KA+G +Q L ERGWWK+GM+ G++D+ ++EKVLQAL +++RTALQ+L ESRGHILL SP HPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLH NIEKS+C K LTIGRVR FARRTRDYCRA
Sbjct: 263 HNPLL-DDRAGVQVRAGYEVFLHGRPXVNLPVSMATTHSWMIVPGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAEEFGAEVYDCVVEGRESIEFHVDLVRDNDSVDRFDALRAELGPEGGHFS-------------------------------------AYAREGKEWVVQGVRGLRKKTEGPGEMVPAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTQRPDLRFLQYWKNRDGYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRDTVITEWCLGPEEGKMYLSNGKWSTEFPEGAEVYDMKLKVGDTQTSTFADGSPPPFYEWDAPGKDVKVAR-KAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAQGSKQSLGERGWWKEGMNASVGIADEKNIEKVLQALTALESKRTALQYLAESRGHILLLSPY-HPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMCTKKDLTIGRVRGFARRTRDYCRA 795
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 646 bits (1667), Expect = 4.270e-216 Identity = 393/930 (42.26%), Postives = 453/930 (48.71%), Query Frame = 1 Query: 103 QVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDF----------------------------------------------YAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLH--------------------------------------------------------------------------------------VSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAK----------------------------GKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAG-----------------------------------------------VSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAY 1671
+VNLPVSM+TTHSWMI LGC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ALRQPLWVRVQR L EE+ RLD +K GP +F AEVYDC ++G++CIEFHVD LRD GS D FD RA LGPEGG YSVRF++AAA CEHFH P KC+C +KV HIGQDES YKAYAREGKEWV++GVRGLRKKTEGPGEMVS FQDERHGFGLP++D L AVNA+R E+G GK+ LTRSPGLRFL+YG KDGYWGYD+F+EQ+EDV+DV + +PDMQ+V E+DHSSGH +QREDGLH V NMNVKYGGKQKVLRD+VMTE LGPEEAKMY +NG+WST+F+EGA D KL VG TQTSTFA G+PPPF+EWDAPRKD K A+ +KEGYEGKAKG ++YLWERGWWK+GM+ G ++D+ +VEKVLQAL DF++ERTALQ+LVESRGHILL SPKCHPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLH NIEKS+C +K+LTIGRVRRFARRTRDYCRAY
Sbjct: 373 EVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAEEFGAERGASASSSTSISCGTTAPSIDSTISVLNLXXXXXXXXXXXXXXXAEVYDCVVEGRECIEFHVDLLRDIGSVDRFDARRAKLGPEGGHYSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGXKVRHIGQDESVYKAHAREGKVGCPRGTQVTEKNEGPGDMVSAFQDERHGFGLPLTDDMLQAVNARRMEKGKEVLIRSPGLRFLQYGTNKDGYWGYDEFKEQIEXKKNEGPGEMVSAFQDERQGFGLPLTDDVLQAVNARGRERGKEVLTRSPGLRFLQYGTNKDGYWGYDEFKEQIEDVLDVFDDFEPDMQVVVEIDHSSGHTRQREDGLHAGNMNVKYGGKQKGVHRGGRGLRXKMYISNGKWSTESTEGAEVYDMKLKVGDTXLDVLDVFEPNMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGAEVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKRXXXXXXXXXXGDEGATDGAGTKPMDMIKEGYEGKAKGSKKYLWERGWWKEGMNASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMCREKHLTIGRVRRFARRTRDYCRAY 1300
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE) HSP 1 Score: 554 bits (1428), Expect = 2.650e-188 Identity = 315/593 (53.12%), Postives = 363/593 (61.21%), Query Frame = 1 Query: 1 MISQPRLTIKDVCKYINGPLLRDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSFDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFE-------------------------------------------VDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRT 1650
M Q RLT+KDV YIN L ++ DLSRL +YQVNLPVSM+TTHSWMI LGC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ALRQPLWVRVQR L EE+ RLD +K GP DF AE DES YKAYA EGK+WV++GVRG+RKKTEGPGEMVSGFQDERHGFGLP++D L AVNA+R E+ GK+ LTRSPGLRFL+YGK KDGYWGYD+F+EQ+ +PDMQ+V E +DHSSGH +QREDGLHV NMNVKYGGKQKVLRD+VMTE LGPEEAKMY +NG + G P + K+KEGYEGKAK +QYLWERG WK+GM+ G+SD+ +VEKVLQAL DF++ERTALQ+LVESRGHILL SPKCHPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLH NIEKS+ +K+ TIGRVRRFARRT
Sbjct: 173 MRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAKDFCAE--------------------------------------------------------------------------DESVYKAYAHEGKKWVVQGVRGIRKKTEGPGEMVSGFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNG----------------------DVAADGAGTKP---------------RDKIKEGYEGKAKDSKQYLWERGLWKEGMNASVGISDEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMSREKHFTIGRVRRFARRT 650 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1017.169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1017.169.1 >prot_E-siliculosus-1a_F_contig1017.169.1 ID=prot_E-siliculosus-1a_F_contig1017.169.1|Name=mRNA_E-siliculosus-1a_F_contig1017.169.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=598bp MISQPRLTIKDVCKYINGPLLRDDKEDLSRLHAYQVNLPVSMSTTHSWMIback to top mRNA from alignment at E-siliculosus-1a_F_contig1017:36443..38236+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1017.169.1 ID=mRNA_E-siliculosus-1a_F_contig1017.169.1|Name=mRNA_E-siliculosus-1a_F_contig1017.169.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1794bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1017:36443..38236+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1017:36443..38236+ >mRNA_E-siliculosus-1a_F_contig1017.169.1 ID=mRNA_E-siliculosus-1a_F_contig1017.169.1|Name=mRNA_E-siliculosus-1a_F_contig1017.169.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3588bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1017:36443..38236+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |