prot_E-siliculosus-1a_F_contig1274.1680.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1274.1680.1
Unique Nameprot_E-siliculosus-1a_F_contig1274.1680.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length198
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: D7FI03_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI03_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 4.650e-78
Identity = 127/129 (98.45%), Postives = 129/129 (100.00%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
            MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTH+DALVGQAGDLLKQMEIEVRSTQDAA+KKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD
Sbjct:    1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHIDALVGQAGDLLKQMEIEVRSTQDAASKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129          
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A6H5L3U6_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U6_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 5.800e-78
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
            MSSIFEAYDEEFLALT DIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAV+KQEREGLLGGREAAFAQGGASQEQRDRLLQTTD
Sbjct:    1 MSSIFEAYDEEFLALTHDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVDKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129          
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.390e-38
Identity = 75/132 (56.82%), Postives = 98/132 (74.24%), Query Frame = 0
Query:    1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLG---GREAAFAQGGASQEQRDRLLQTTD 129
            M+SIFE+Y EEF+ LT D+  NISH +TYET+   +  QL   + L+GQA DLLKQME+E RST DA T+++LQ K+ASYKK+L S+R DYQ AVEK ER+GL+    G E  ++Q GAS+E R+RLL+T D
Sbjct:    1 MTSIFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGD 132          
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A482S7X4_9ARCH (V-SNARE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X4_9ARCH)

HSP 1 Score: 90.9 bits (224), Expect = 3.330e-20
Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 0
Query:    3 SIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
            SIF+AYD EF +LT+DI  N   LN  ++D     + +  +DAL+ QA DL+KQME+E+RS  D AT+K L  K+  YKKT Q+L+ D++RA E+ ER  L+G +         S E R RLL   D
Sbjct:    2 SIFDAYDAEFASLTKDINKN---LNDLKSDPQNGSSLIKMIDALLSQAQDLIKQMEVELRS-HDTATRKSLTEKVNVYKKTRQNLKSDFERAKEESERSALIGEK---------SGEHRQRLLNAND 115          
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A7S0WIR7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WIR7_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 3.040e-5
Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 0
Query:    2 SSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAV------EKQEREGLLGGREAAFAQGGASQEQRDRLLQTT 128
            S++F  Y++++   + D    I  L     DA +K+  L+ ++  + QA D+LK+M++EVRS   A   K LQ K+  YK  L SL+   Q+A       +    E  LGG  A+ + G     QRDR+L  T
Sbjct:   13 SALFRQYEQDYCTKSTDTSRKIGLLEALNGDARRKK--LSEIEGDLRQAEDVLKRMDLEVRSL-PADQSKPLQAKVKEYKADLASLKTQVQKAAASMPAGDAARAELGLGGDYASSSAG-----QRDRMLTAT 137          
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A835ZAQ6_9STRA (V-SNARE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ6_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 6.300e-5
Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 0
Query:    2 SSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
            S +FE+Y EE L L  ++ + +   +  + D    +         +G+A DLL+Q+E+E RS  DAAT+ +LQ ++ ++K +L SLR     A E+++    + G + A     A+  QR R+L   D
Sbjct:    3 SPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQ---------LGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRT----ASERRQLVSRVDGSDPA-----AAAAQRQRMLDAGD 112          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FI03_ECTSI4.650e-7898.45Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6H5L3U6_9PHAE5.800e-7898.45t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CJ32_9STRA4.390e-3856.82Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A482S7X4_9ARCH3.330e-2044.88V-SNARE domain-containing protein n=1 Tax=archaeon... [more]
A0A7S0WIR7_9CHLO3.040e-533.08Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A835ZAQ6_9STRA6.300e-531.25V-SNARE domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..101
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableGENE3D1.20.5.110coord: 118..196
e-value: 3.5E-18
score: 67.6
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 130..191
e-value: 3.0E-10
score: 40.2
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 1..191
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 1..191
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 131..190
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 123..190
e-value: 0.0039
score: 26.4
IPR007705Vesicle transport v-SNARE, N-terminalPFAMPF05008V-SNAREcoord: 12..93
e-value: 3.7E-15
score: 56.1
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 3..99
e-value: 1.3E-18
score: 69.2
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 6..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1274contigE-siliculosus-1a_F_contig1274:18910..23637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1274.1680.1mRNA_E-siliculosus-1a_F_contig1274.1680.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1274 17960..23787 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1274.1680.1 ID=prot_E-siliculosus-1a_F_contig1274.1680.1|Name=mRNA_E-siliculosus-1a_F_contig1274.1680.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=198bp
MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQA
GDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQER
EGLLGGREAAFAQGGASQEQRDRLLQTTDRLDGQSRRLEDSKRTMMEIED
TAMEITTELGRNREKIGEVHDKVRETKSNLDEGKGILDKMNGWFRNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE
IPR038407v-SNARE_N_sf
IPR007705Vesicle_trsprt_v-SNARE_N
IPR000727T_SNARE_dom