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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: D7FI03_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI03_ECTSI) HSP 1 Score: 242 bits (618), Expect = 2.270e-73 Identity = 127/129 (98.45%), Postives = 129/129 (100.00%), Query Frame = 1
Query: 151 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 537
MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTH+DALVGQAGDLLKQMEIEVRSTQDAA+KKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD
Sbjct: 1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHIDALVGQAGDLLKQMEIEVRSTQDAASKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A6H5L3U6_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U6_9PHAE) HSP 1 Score: 241 bits (615), Expect = 2.770e-73 Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 1
Query: 151 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 537
MSSIFEAYDEEFLALT DIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAV+KQEREGLLGGREAAFAQGGASQEQRDRLLQTTD
Sbjct: 1 MSSIFEAYDEEFLALTHDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVDKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA) HSP 1 Score: 140 bits (354), Expect = 6.940e-35 Identity = 75/132 (56.82%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 151 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLG---GREAAFAQGGASQEQRDRLLQTTD 537
M+SIFE+Y EEF+ LT D+ NISH +TYET+ + QL + L+GQA DLLKQME+E RST DA T+++LQ K+ASYKK+L S+R DYQ AVEK ER+GL+ G E ++Q GAS+E R+RLL+T D
Sbjct: 1 MTSIFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGD 132
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1680.1 vs. uniprot
Match: A0A482S7X4_9ARCH (V-SNARE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X4_9ARCH) HSP 1 Score: 91.7 bits (226), Expect = 1.540e-18 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 157 SIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 537
SIF+AYD EF +LT+DI N LN ++D + + +DAL+ QA DL+KQME+E+RS D AT+K L K+ YKKT Q+L+ D++RA E+ ER L+G + S E R RLL D
Sbjct: 2 SIFDAYDAEFASLTKDINKN---LNDLKSDPQNGSSLIKMIDALLSQAQDLIKQMEVELRS-HDTATRKSLTEKVNVYKKTRQNLKSDFERAKEESERSALIGEK---------SGEHRQRLLNAND 115
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 594 |
| Model size | 1694 |
| Exons | 6 |
| Ec32 ortholog | Ec-12_006560.2 |
| Ec32 ortholog description | Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko00001,ko03019,ko04131 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | S |
| Ec32 ortholog | Ec-12_006560.1 |
| EggNOG OGs | KOG1666@1,KOG1666@2759 |
| EggNOG free text desc. | vesicle fusion with Golgi apparatus |
| GOs | GO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0002576,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005767,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005798,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006892,GO:0006896,GO:0006904,GO:0006906,GO:0006914,GO:0006996,GO:0007030,GO:0007033,GO:0007034,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008200,GO:0008283,GO:0009056,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016248,GO:0016482,GO:0017081,GO:0019869,GO:0022406,GO:0030133,GO:0030134,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030173,GO:0030424,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031091,GO:0031093,GO:0031201,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031901,GO:0031902,GO:0031974,GO:0031982,GO:0031983,GO:0031984,GO:0032010,GO:0032501,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0033365,GO:0034613,GO:0034774,GO:0036477,GO:0042144,GO:0042147,GO:0042175,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043679,GO:0044237,GO:0044248,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045324,GO:0045335,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048280,GO:0048284,GO:0048471,GO:0050789,GO:0050879,GO:0050881,GO:0050882,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051649,GO:0055037,GO:0055038,GO:0060205,GO:0060341,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0065009,GO:0070013,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090161,GO:0090174,GO:0097458,GO:0097576,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:0099106,GO:0099503,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0150034,GO:1903076,GO:1903827,GO:1904375,GO:1905475 |
| KEGG Pathway | ko04130,ko04138,map04130,map04138 |
| KEGG ko | ko:K08493,ko:K08494,ko:K18749 |
| Preferred name | VTI1A |
| Seed eggNOG ortholog | 2880.D7FI03 |
| Seed ortholog evalue | 1.1e-61 |
| Seed ortholog score | 243.0 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927796.2507164-UTR-E-siliculosus-1a_F_contig1274:17959..18909 | 1622927796.2507164-UTR-E-siliculosus-1a_F_contig1274:17959..18909 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1274 17960..18909 - |
| 1696318682.8928998-UTR-E-siliculosus-1a_F_contig1274:17959..18909 | 1696318682.8928998-UTR-E-siliculosus-1a_F_contig1274:17959..18909 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1274 17960..18909 - |
| 1622927796.3658166-UTR-E-siliculosus-1a_F_contig1274:23637..23787 | 1622927796.3658166-UTR-E-siliculosus-1a_F_contig1274:23637..23787 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1274 23638..23787 - |
| 1696318682.9587867-UTR-E-siliculosus-1a_F_contig1274:23637..23787 | 1696318682.9587867-UTR-E-siliculosus-1a_F_contig1274:23637..23787 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1274 23638..23787 - |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1274.1680.1 >prot_E-siliculosus-1a_F_contig1274.1680.1 ID=prot_E-siliculosus-1a_F_contig1274.1680.1|Name=mRNA_E-siliculosus-1a_F_contig1274.1680.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=198bp
MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHVDALVGQA
GDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVEKQER
EGLLGGREAAFAQGGASQEQRDRLLQTTDRLDGQSRRLEDSKRTMMEIED
TAMEITTELGRNREKIGEVHDKVRETKSNLDEGKGILDKMNGWFRNL* back to topmRNA from alignment at E-siliculosus-1a_F_contig1274:17960..23787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1274.1680.1 ID=mRNA_E-siliculosus-1a_F_contig1274.1680.1|Name=mRNA_E-siliculosus-1a_F_contig1274.1680.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5828bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1274:17960..23787- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCTGCTGTTGGTGTTGCACTGCTGTTGTGAACTCGAATTCACACATTA
CACCGTGGGCGCAGTCCTCCGGTTCCGTAGGTCTGGTACATTATCCACCG
GGTATCCTCACCGTTGAATTTCGGCAGCAGTTCGTTGCGGACGGGGAGCG
ATGTCTTCGATTTTCGAGGCCTACGACGAGGAGTTCTTGGCTCTCACCCA
GGACATCGGCAACAACATCAGCCACTTGAACACCTACGAGACCGACGCCG
GTGAGTCTGTCTCTGGCCGAGGTCTCTCTTCCATGGTGTTGTACATCAAA
AGCCGTCCCCCCTCTCAGGACGTAAAACTACGCCATGTCAGAATTCCCCC
GCCAAAATCGAAGAACCTGCTGTCCAGGTACACTCCTTGGAACACTCCGA
ACCCATTTCCTAACTAACTTGTCTCACATGGTTCGTATGCCTACGCTTGT
ATGATACCATCCACAGGCTTCGGTGCGTAGCATGGGTGATTCTATACTCG
CCCCCGCCCCCCGCAATATCCACTGCTGTCCATCACCCTTTCTCTTGGCA
AAATTTCAAAAAGGAAGTTGGGAAGGCACCATTTATGATGCCTAGCACGG
ACTTGTACCGGTGGAATGTACCGGTGGAATGATGAAATGGTAGTCTTGCA
TGTGCTGCTCGTCGTATGCATACGCGAGGCATACACTCTTGTTGATCACT
TTACAGCAGCACTCACTCACTACATTGAACACCTCTTTTCCCTAGGCACG
TAATTTGCGAGGTGAGCACAAACGATGATTCTCATTCCGGGCCAATCTGT
TCGTCCTGGAATCACAAATCTATCGCGGGGGCAATAAATGGCGCTACAGT
AGTGGAATTGCTAAGGATCCCTGTTTGGTTGGCCCTTCATAATTTTTGAG
TGCGGCCACTAATTAAAACAATAGAAATATGTCCATGATCCCCCACACGA
CATATCCGGTAAGATTACGCATGGTATTGCGATGCCAATTTTTCACGACC
ACCTTCGCGGGCGTCCCTGCCACCATATACTATCTGCTTACCAGCAGTCC
TCCCATTTGTTTTTTTTTGCGTCTTGTCCACGATGCCCGTCTCTTGAAGG
GAAAAAGCGAACGCAGTTGACGCACGTCGATGCCCTCGTGGGGCAGGCCG
GGGATCTGCTTAAGCAGATGGAGATCGAAGTCCGCAGCACGCAGGATGCC
GCAACCAAGAAGGAGCTGCAGGGGTGAGTGAGTTGCGGCGTGCGGCGCGT
AAACACAGCAGTACCTACCAGAGCACGCTTTTCGTAGAAGACACCCGTCA
TATTCACGGCATTATTTAGCAGGAGGGGCGGAGACGCCGGAGAGTTGAGG
CAGCAAGGTAGCAGCAGTATGTGAAGAAGGAAGAGGGAGAGAGGGACGGA
AAGACGGACAGACAGTCAGAGAGGGAGTATTTGTAAAGAGTGAGATAGAA
CAGACAGACAGACAGACAGACAGACAAAAGAGGCAGAGACCGGTTAGCGC
TCGACGGAACAAAGCACCACGGCCGGCAAGCCCACAGCAGGTAGAACGTA
AGGCGGCAAACAGATGTACACACGTTCGGGCAACGCCCATTCTTCGAATC
GCCCCCCCCCCTCCTTGGATCCCAATCGGTGATCGATCGGTCGTGTGGGA
ACAATGCTCCATCCTCTCGAGGACGCGTGGTCAATGGTCTAGCGCTAAGG
CATGCAAAAACATAAGAGTACGCCCCCCCCTTCCCGGGACTTGGGATTTG
ACTACAGAAAGCCTCTTTGCGCATTATATCCCCCTATGAAATTGGCGTTT
CTTCGTTGGTCGGTAGGTTAGCGCGGTCGATGCTATTTACAGAAATACAG
ACTCGCAAACCCACGCAGAGCGGGAGACAGAGAGAAAGATCAGCGCACGG
CGAGAGGACCAGGGGGGGAAAGCGAGCACGCACGCACAAACTCCTGTCAT
GATTGTAACTCGAGCCCAACAAGGAGCACACGCCAGTACCCCCACCTCAA
AATGCGCACTTAATCAAAGCGCTATTTATTCTGCTTCAGAAGATGGATCT
TGGTTACTGCTGTCCAGGGGTCAAATCGGTAGACTTTTCCTAGAGGGCTT
CGACCAAGTGCCTGTGTATCATAACCCTTGCTGCTCGAGGTTCATCTCGA
AGCACCCGATCGTCCGCGCGGTTTAGTTTGGAAGCCCTTCTCCTGAACGC
AACGCCCTGGCATCTAACCCTTAACCCCCTCGCCACCGGGCTGCTCTCCA
CTACTCTACCGACTCTGTCGCAACGACCAACAGCAAGATCGCCAGCTACA
AGAAGACGCTGCAGTCTTTGCGAGGGGACTACCAGCGGGCTGTCGAGAAG
CAAGAGCGGGAGGGGCTTCTGGGAGGGAGAGAGGCGGTGAGATTTTCGCG
CGGCGAGGCATCGCGCGCGGAGCTGAGCGGAGCAAAAAGAGCAGAGACAC
TCTCGTCACCCCGTGTGCCCTCTCCCGATGAAATGGGACGTGACGGCCAT
TTTGGCGGCGGCAGTTACGTCATGCTGCTGTCGAGTAGTCACCGCCCAGA
GAATGAGGTCTCGCAAAGTCTCTTGGTGCCCCCCTGCGTTGCCTCCCGTC
TATGCTGCAATATTCATGATATGGCGCTGTGTGTCGGGCTTGTGTCGTTG
GCTTCAGCTGCTGTCGGCGCTCCTCACTGTTCTTGTGACGCGTTGCCCGC
GGCGTGCCCAGAGGGGGGGGGGGTACAAACGGCGCCCTGCGTGGTGATGG
CGCCGCAGTGCGCAGTGTCGAACTCAGCTTTAATGACCGTTGCAAGTTGA
CAAAGGGAAGAGGAATGCAACAACAAACCCATTACCCCACCGTTGATGTT
GTCCACACCCCTTCTTTGCGCATTGCTTGCGTTTCTTTCCGTGCGGCGCG
GCAGGCGTTCGCGCAGGGCGGCGCCTCGCAGGAGCAGCGGGATCGACTGC
TGCAAACGACCGACCGCCTGGACGGGCAGAGTCGGCGATTAGAGGACAGC
AAGAGAACCATGATGGAGATTGAGGACACCGGTGAGAGGGAGAAAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGTTGGCGCCGG
GGGTGGGGGGGGGGGGCAGGAGAGGGAAGAAAACTCTTTTTACGATCACT
ACGACAAAGTGATTAGAAAAACAGAGGTTGGCGATGAAGGTTGTACAGTA
GTCTCTTGGCGTTCTCGTAGTTTTTTCTTGCCGTCTTCATTTTAAGACTG
TGCGGTGACTGGCTGCCCACTGTCCCATCGGCAATCGACCCTTTTCGTCG
AAACGGCTTGTCTGTTCTTCCCAAGTCAAAGTCATAGGGTCATCCTGAGG
CTTTGCCGGCCTCGGGCTATCAAGCATGGTGTGTTGAACGTTCCGAGAGC
TACCACTGGTTCGTGGCGCCCTTGCTTGAAGTGCCAGCGATTTTGCCACA
CCTCTGCCCACGTTTTCCGCCCATCAGTTCTCCGTCCGCACCGCTCAGCA
CGTGTCTCGAAAACAACATTGCCGTGTCTCGAAACAACCATAACTTTTGC
TCGCGGCCCGTCTTTGTGTCTCATCGTTCGTATGATCGAAAAGCGATGGA
AATCACGACGGAGCTGGGACGGAACCGAGAAAAGATCGGAGAGGTGCACG
ACAAGGTGAGGAGTTGGGAAGAACGAACGGAGTGCCCGATGTGGCCGTGT
CTTGTCTTTCCTCTTATAGGCCGCGCAACGTTAGCCTTGGCCGTTCGTTC
CCCCAAAGATAATTAACTGTTCGGGCCGTCCCTACAACTCTCGATGTTCC
CGCCGAACCTCAAGTTATAAAGCAAACGACATCACCTTAGTCCGACCGTC
TACACGGACATGTATACAGGAAATCCTTGGTCCTCTTGTGACCCATACAG
TACGTCACGCGTAGCATATATGCATACGATCACACCATTTTATCAACCAC
ATGGCTTTTTTCTTGACGTGTCCTCAGTGCACTCCGAGCCAACAATTATC
AGACCCGACCAAACTCATTTTATCAACCACATGGCTTTTTTCTTGACGTG
TCCTCAGTGCACTCCGAGCCAACAATTATCAGACCCGACCAAACTCAAAA
ACCATCCACTCAAAGGATCGTTTACTTTCACCTCTCTATTTCAAGTCCGC
ACAAAGCTGTTGGGTGCTGTGCATGGCCTACATATGTCATTCGCCGGTGC
CCCCGAGACACGAAGCCCCGCCCCGGGTGCGTGTTGCACAAGGTGCTTGC
TTGCCTGGTACCAAGCAGGGGGTGCGCGCAAGCAGGTCCACACCGCACCC
TGCTGCACTACCGTGCTGTTGGATATGTGAAGCGCACGAGCGTTTTGGCA
GTTCGCTGCCCTGTGTTTCGAGTTTGGCTTTTATCGAGGATGGTATATAT
CCCATGTTATAGTCCGGTATGTGCAGGCTTTGGCTCGGACAATGGTGTTT
TGTTGTGATGTGAACGTGGCTTAACGGGGGCCCCGCGTTTGCTTTGGTCA
GTCGTGCGAATGGACCCACTTGAGCAGGATCTAGCCTCGGGCGAGTTGCT
GCCAAGCGAAAGTGTTTGTTACGGGCATGACTTGTGGCATTGCAGTGTGT
CCCGTAGTTGTTCGTTGGTAAACAGCAGTGTTTACTCCCTGCTCGTGCGA
GGCATTCTTGGTCGGCGAGATAGCGGCGTATGTCTCTCTCTCTCTCTCTC
TCTCTCCCTCTCTCTCTCACGTGGGATGCTCTGCGTGTGTCGTTGCTGTG
CGTGCCGTTGTTGTTGTTGCCCGCGCGCGCCCGTGCCCGACATACGGTAG
GTGCGGGAGACGAAATCAAACCTAGACGAGGGCAAGGGCATCCTCGACAA
GATGAACGGCTGGTTCCGCAATCTGTAAACGTTCACGAACCCTCGCGCCG
AACCGCGCCGCGCCACGCCGCGCCTCTGAACCGACCTGTATTCCGGTTTT
GACATACGGTTGGCGTTTGTTTGTTTGCGGATGCGAATCATAATCTGCTG
GGATTTGTTGGCGTGGCCCTTGCGCCGCTTGTAAATATTTTGGTGGTGCG
ACCTTCCCTTTGGCTTGTTTTGCCGAGAAGGTCGATGTGCAGTGTCTGGT
TCCATAGATTCTTCGAATTCCACTCTTTTGGGGGTTGCTGTAGATCTGCG
AACGTTTCCCGTAAGAGTTGATACATGTAATTTTTTTTTTCCTTTTTCAC
AGATTGCGCCGGCGCAGCATTCTTTCTACCTGGCTATGTTTTGGTGTCAG
CTTCTCGAGCGCTTTCCGCGCAGCCTGTGTATGCAATACGCACTAGCCTT
TGCTTGGAGGACTTGAGAGTGATACCTTCTTTCTTTTTGTCCAAGGAAAA
AGCGTTGTTGTTTTTATGTAGGCGGAAAACCAAGCTTGAAGGTTTTGCCC
TCTTCAAGTGCCGTCGTTTGTCGCAAATGTGTTTTATTTGCTGTTTCAAC
ACACCCCTCTTTAGATGTCATGGGGTGTTTTTTTCTGTGCACTCTGGGTG
TGTTCTGGGAAGTAATCTTACGTACATACGTTCGACACAGCGCCACAATT
TTAGGTATTGAGCCCCATTTAACGGTGGTTAGCTTTCGAGAGTACGTCCC
TGAGTTAGGTTGTTATTGCACAGCCTCCCTTCCGATCGAGGGCGAACATC
ATGTGCTTTGTTTCGACTTGCCTCGCTGTTGCCAGCCGAGCTTAAGTGAA
CTGGGCAATAACGGCGCCTGTTTGGCTCGCTTTTGCTGAATGTGCATTCC
ACGGCATCGGCCCCTGGAGCAATCTTGGGGGCGCGTGTGACGTTTGTTGG
AGTTTGAAAGACACGCCGTTCCTGCTGC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1274:17960..23787- >mRNA_E-siliculosus-1a_F_contig1274.1680.1 ID=mRNA_E-siliculosus-1a_F_contig1274.1680.1|Name=mRNA_E-siliculosus-1a_F_contig1274.1680.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1188bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1274:17960..23787- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCTTCGATTTTCGAGGCCTACGACGAGGAGTTCTTGGCTCTCACCCA
GGACATCGGCAACAACATCAGCCACTTGAACACCTACGAGACCGACGCCG
ATGTCTTCGATTTTCGAGGCCTACGACGAGGAGTTCTTGGCTCTCACCCA
GGACATCGGCAACAACATCAGCCACTTGAACACCTACGAGACCGACGCCG
GGAAAAAGCGAACGCAGTTGACGCACGTCGATGCCCTCGTGGGGCAGGCC
GGGGATCTGCTTAAGCAGATGGAGATCGAAGTCCGCAGCACGCAGGATGC
CGCAACCAAGAAGGAGCTGCAGGGGGAAAAAGCGAACGCAGTTGACGCAC
GTCGATGCCCTCGTGGGGCAGGCCGGGGATCTGCTTAAGCAGATGGAGAT
CGAAGTCCGCAGCACGCAGGATGCCGCAACCAAGAAGGAGCTGCAGGGCA
AGATCGCCAGCTACAAGAAGACGCTGCAGTCTTTGCGAGGGGACTACCAG
CGGGCTGTCGAGAAGCAAGAGCGGGAGGGGCTTCTGGGAGGGAGAGAGGC
GCAAGATCGCCAGCTACAAGAAGACGCTGCAGTCTTTGCGAGGGGACTAC
CAGCGGGCTGTCGAGAAGCAAGAGCGGGAGGGGCTTCTGGGAGGGAGAGA
GGCGGCGTTCGCGCAGGGCGGCGCCTCGCAGGAGCAGCGGGATCGACTGC
TGCAAACGACCGACCGCCTGGACGGGCAGAGTCGGCGATTAGAGGACAGC
AAGAGAACCATGATGGAGATTGAGGACACCGGCGTTCGCGCAGGGCGGCG
CCTCGCAGGAGCAGCGGGATCGACTGCTGCAAACGACCGACCGCCTGGAC
GGGCAGAGTCGGCGATTAGAGGACAGCAAGAGAACCATGATGGAGATTGA
GGACACCGCGATGGAAATCACGACGGAGCTGGGACGGAACCGAGAAAAGA
TCGGAGAGGTGCACGACAAGCGATGGAAATCACGACGGAGCTGGGACGGA
ACCGAGAAAAGATCGGAGAGGTGCACGACAAGGTGCGGGAGACGAAATCA
AACCTAGACGAGGGCAAGGGCATCCTCGACAAGATGAACGGCTGGTTCCG
CAATCTGTAAGTGCGGGAGACGAAATCAAACCTAGACGAGGGCAAGGGCA
TCCTCGACAAGATGAACGGCTGGTTCCGCAATCTGTAA back to top
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