mRNA_E-siliculosus-1a_F_contig1265.1633.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1265.1633.1
Unique NamemRNA_E-siliculosus-1a_F_contig1265.1633.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A6H5KZ71_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ71_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 3.090e-133
Identity = 208/229 (90.83%), Postives = 213/229 (93.01%), Query Frame = 1 
Query:  286 LGFVVPXAA-PAAAARWQPVCGGCSTAAAGQPRAQGMRTYTIGATGLHGGXXXXXXXTVAPPTMMATPLPETPDAPPTTEELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            LGFVVP AA PA+AARWQPVC G STAAAGQPRAQG + Y IGA GLHGG       TVAPPTMMATPLPETPDAPPTTEEL+PALVYGESA RSFVKALVWRLTAGVVTL+SGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKI+WGKEYEPEYYL
Sbjct:   17 LGFVVPPAAAPASAARWQPVCRGSSTAAAGQPRAQGTKAYAIGAKGLHGGAGGSRSRTVAPPTMMATPLPETPDAPPTTEELRPALVYGESAARSFVKALVWRLTAGVVTLVSGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKIDWGKEYEPEYYL 245
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A836CRK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 6.000e-59
Identity = 100/145 (68.97%), Postives = 117/145 (80.69%), Query Frame = 1 
Query:  535 ALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            AL + E+  RS  KA+VWR+TA V+TLISGLVFS +L TA SIVGSDFVTKSGFMF GER+WNKV WG+    D  KRSLAKA+LWRVFAA NTLICG FLA DLSVA KIAG+DT+FKT LF++NER W ++ WGKEYE E+ +
Sbjct:  103 ALYFTETTMRSLAKAVVWRVTAAVITLISGLVFSKNLKTAASIVGSDFVTKSGFMFLGERVWNKVNWGKGAKTDGAKRSLAKALLWRVFAAGNTLICGAFLAGDLSVALKIAGSDTVFKTFLFYINERMWARVEWGKEYEIEFVI 247
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A835YMA1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA1_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.450e-57
Identity = 100/160 (62.50%), Postives = 120/160 (75.00%), Query Frame = 1 
Query:  490 PETPDAPPTTEELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            P T  A P+T  L+ AL + E+  RS  KA+VWR+ A V+TL SGLVFS +L  A SIVGSDFVTKSGFMF GER WNKV WG+    D  KRSLAKA+LWRVFA  NTLICG FLA DLSVA KIAG+DT+FKT LF++NER W ++ WGKEY+ ++ +
Sbjct:    1 PSTAAATPSTANLK-ALYFTETTMRSLAKAIVWRVAAAVITLASGLVFSKNLRMAASIVGSDFVTKSGFMFLGERAWNKVNWGKGAKTDGAKRSLAKALLWRVFATGNTLICGAFLAGDLSVALKIAGSDTVFKTILFYINERMWARVEWGKEYDADFVI 159
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7S2UXG1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXG1_9STRA)

HSP 1 Score: 182 bits (463), Expect = 9.910e-50
Identity = 83/153 (54.25%), Postives = 114/153 (74.51%), Query Frame = 1 
Query:  532 PALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSG-------DSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            P + + E+  RS VKAL+WRLTAG++T I+  +FSG L+TA  IVG DFV+K+GFM+ GER+W+KV WG+ K         DS  RSL KA++WR FAA+NTL+   F+AKD+S+A KIA +DT+FKT LF++NER W+++ WGKEY+ EY +
Sbjct:   75 PEVPFTETNKRSIVKALLWRLTAGIITFITSFIFSGDLSTAAKIVGGDFVSKAGFMYVGERVWSKVNWGRTKGNKDSKTAMDSKSRSLTKALVWRAFAATNTLVMSFFMAKDVSIAGKIASSDTVFKTFLFYINERIWSRVEWGKEYQLEYNI 227
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7R9ZQP1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQP1_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.670e-46
Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 1 
Query:  523 ELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            E  P   + E+  RS VKA  WR+ AG VT  + L FSGSLATA+SIVGSDF +KS  MF GERL NK   G+   GD   RSLAKA++WR+FA  NTL   +F+AKD+S+ASKIAG+D +FKTAL F  ERAW K+ WGKEY+P + +
Sbjct:   33 ESAPQGSFSETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDPGFSI 181
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7R9ZQR0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQR0_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.590e-45
Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 1 
Query:  523 ELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            E  P   + E+  RS VKA  WR+ AG VT  + L FSGSLATA+SIVGSDF +KS  MF GERL NK   G+   GD   RSLAKA++WR+FA  NTL   +F+AKD+S+ASKIAG+D +FKTAL F  ERAW K+ WGKEY+P + +
Sbjct:  125 ESAPQGSFSETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDPGFSI 273
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A448ZGE6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGE6_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.240e-45
Identity = 85/146 (58.22%), Postives = 107/146 (73.29%), Query Frame = 1 
Query:  532 PALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            PA  + E+  RS VKAL+WR+ AG VT I+   FSGS+ATA+SIVGSDF++KS  MF GERL NK + G+    D   RSL KA++WR+FA  NTL   +F+AKD+S+ASKIAG+D +FKTAL F+ ER W KI WGKEY+ EY L
Sbjct:  113 PAANFSETTGRSAVKALMWRVIAGSVTFITSFKFSGSVATALSIVGSDFLSKSFTMFIGERLMNKSQAGRKSGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDISIASKIAGSDAIFKTALMFVYERVWAKIEWGKEYQVEYNL 258
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7S1Y2U4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2U4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 9.130e-44
Identity = 85/146 (58.22%), Postives = 104/146 (71.23%), Query Frame = 1 
Query:  532 PALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            P   + E+  RS VKA  WRL AG VT ++ L FSGSL TA++IVGSDF +K+  MF GERL NK   G+    D  KRSLAKA+LWR+FA +NTL   VF+AKDLS+ASKIAG+D +FKTAL F  ER W KI WGKEY+ E+ +
Sbjct:  105 PGGTFSETTGRSAVKAFCWRLIAGSVTFVTSLRFSGSLKTALTIVGSDFFSKAFTMFIGERLMNKSNAGRKGGADDVKRSLAKALLWRLFAIANTLTMAVFIAKDLSMASKIAGSDAIFKTALMFGYERVWAKIEWGKEYQVEFSI 250
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A1E7EW78_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW78_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.680e-43
Identity = 76/142 (53.52%), Postives = 105/142 (73.94%), Query Frame = 1 
Query:  544 YGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            + E+  RS VKAL+WR+ AG VT I+ L FSGS+ TA++IVGSDF++K+  MF GERL NK   G++   D   RSL KA++WR+FA  NTL   +F+AKD+++ASKIAG+D +FKT L F+ ER W KI WGKEY+ ++++
Sbjct:   44 FSETTARSAVKALMWRVIAGSVTFITSLRFSGSMKTALTIVGSDFLSKAFTMFIGERLMNKSNAGRESGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDITMASKIAGSDAIFKTGLMFVYERVWAKIEWGKEYQVDFFI 185
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BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7S1B4Q8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4Q8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.010e-42
Identity = 78/142 (54.93%), Postives = 105/142 (73.94%), Query Frame = 1 
Query:  544 YGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 969
            + ES TRS VK+++WR+ AG VT I+ L FSGS+  A+SIVGSDF +K+  MF GERL N    G+  SGD+ KRSL KA++WR+FA +NTL   VF+AKDLS+ASKIA +D + KT + +  ER W+K+ WGKEYE E+++
Sbjct:  161 FKESTTRSLVKSIMWRMVAGTVTFITSLRFSGSVKVALSIVGSDFFSKALTMFLGERLMNNSSLGRGSSGDNKKRSLIKALIWRLFAIANTLTVAVFVAKDLSIASKIASSDAVIKTTMMYFYERIWSKVEWGKEYEAEFFI 302
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ71_9PHAE3.090e-13390.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CRK4_9STRA6.000e-5968.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMA1_9STRA1.450e-5762.50Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2UXG1_9STRA9.910e-5054.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9ZQP1_9STRA1.670e-4657.05Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7R9ZQR0_9STRA2.590e-4557.05Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A448ZGE6_9STRA3.240e-4558.22Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1Y2U4_9STRA9.130e-4458.22Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7EW78_9STRA4.680e-4353.52Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1B4Q8_9STRA1.010e-4254.93Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1265contigE-siliculosus-1a_F_contig1265:26614..31678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size780
Model size2030
Exons6
Ec32 orthologEc-06_003230.1
Ec32 ortholog descriptionDomain of unknown function DUF2061, membrane
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2DTXE@1,2S6IU@2759
EggNOG free text desc.Predicted membrane protein (DUF2061)
Seed eggNOG ortholog2880.D8LRA7
Seed ortholog evalue2.5e-109
Seed ortholog score401.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1265.1633.1prot_E-siliculosus-1a_F_contig1265.1633.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1265 27672..31033 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927786.7452366-UTR-E-siliculosus-1a_F_contig1265:26613..276711622927786.7452366-UTR-E-siliculosus-1a_F_contig1265:26613..27671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1265 26614..27671 -
1696318679.846863-UTR-E-siliculosus-1a_F_contig1265:26613..276711696318679.846863-UTR-E-siliculosus-1a_F_contig1265:26613..27671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1265 26614..27671 -
1622927786.8189511-UTR-E-siliculosus-1a_F_contig1265:31033..311291622927786.8189511-UTR-E-siliculosus-1a_F_contig1265:31033..31129Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1265 31034..31129 -
1696318679.9141524-UTR-E-siliculosus-1a_F_contig1265:31033..311291696318679.9141524-UTR-E-siliculosus-1a_F_contig1265:31033..31129Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1265 31034..31129 -
1622927786.8312128-UTR-E-siliculosus-1a_F_contig1265:31582..316781622927786.8312128-UTR-E-siliculosus-1a_F_contig1265:31582..31678Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1265 31583..31678 -
1696318679.9247062-UTR-E-siliculosus-1a_F_contig1265:31582..316781696318679.9247062-UTR-E-siliculosus-1a_F_contig1265:31582..31678Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1265 31583..31678 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927786.7574754-CDS-E-siliculosus-1a_F_contig1265:27671..277491622927786.7574754-CDS-E-siliculosus-1a_F_contig1265:27671..27749Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 27672..27749 -
1696318679.861097-CDS-E-siliculosus-1a_F_contig1265:27671..277491696318679.861097-CDS-E-siliculosus-1a_F_contig1265:27671..27749Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 27672..27749 -
1622927786.7699273-CDS-E-siliculosus-1a_F_contig1265:28707..288751622927786.7699273-CDS-E-siliculosus-1a_F_contig1265:28707..28875Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 28708..28875 -
1696318679.876355-CDS-E-siliculosus-1a_F_contig1265:28707..288751696318679.876355-CDS-E-siliculosus-1a_F_contig1265:28707..28875Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 28708..28875 -
1622927786.7823591-CDS-E-siliculosus-1a_F_contig1265:29611..297221622927786.7823591-CDS-E-siliculosus-1a_F_contig1265:29611..29722Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 29612..29722 -
1696318679.8912525-CDS-E-siliculosus-1a_F_contig1265:29611..297221696318679.8912525-CDS-E-siliculosus-1a_F_contig1265:29611..29722Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 29612..29722 -
1622927786.7925174-CDS-E-siliculosus-1a_F_contig1265:29960..301491622927786.7925174-CDS-E-siliculosus-1a_F_contig1265:29960..30149Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 29961..30149 -
1696318679.8992443-CDS-E-siliculosus-1a_F_contig1265:29960..301491696318679.8992443-CDS-E-siliculosus-1a_F_contig1265:29960..30149Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 29961..30149 -
1622927786.8072278-CDS-E-siliculosus-1a_F_contig1265:30799..310331622927786.8072278-CDS-E-siliculosus-1a_F_contig1265:30799..31033Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 30800..31033 -
1696318679.9065692-CDS-E-siliculosus-1a_F_contig1265:30799..310331696318679.9065692-CDS-E-siliculosus-1a_F_contig1265:30799..31033Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1265 30800..31033 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1265.1633.1

>prot_E-siliculosus-1a_F_contig1265.1633.1 ID=prot_E-siliculosus-1a_F_contig1265.1633.1|Name=mRNA_E-siliculosus-1a_F_contig1265.1633.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=260bp
MVVPADKMPAATTRSMLLLLLLAAAAVVTPSLGFVVPPAAPAAAARWQPV
CGGCSTAAAGQPRAQGMRTYTIGATGLHGGGGSSSSRTVAPPTMMATPLP
ETPDAPPTTEELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGS
LATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLW
RVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWG
KEYEPEYYL*
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mRNA from alignment at E-siliculosus-1a_F_contig1265:26614..31678-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1265.1633.1 ID=mRNA_E-siliculosus-1a_F_contig1265.1633.1|Name=mRNA_E-siliculosus-1a_F_contig1265.1633.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5065bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1265:26614..31678- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CATACCGCTCACAGCACCTGCATTTTCGTATCCTGTTACACACTTTTCAA
GCATCCCTGTGCTGAAACGTGGTCGGATATCAGCTGGGCTACCCAGGTCA
GTCTCTCCGGCGCCGTTTTCTCCCGATATGAGGTCAGGATCTGATCAATG
CACTCGCAGGATTGCACCTCTCGACGGCGGGTGTACGTACTCGGCCCCAG
AGCATGCGAGGAGTTGGACCAGCCAACCATGTAGCGTTCGTTGCCTGTTG
AGCCTCGAGTCAGCTCTTGCTTTGACACCCGACGGCATGGTCTGGATGTC
TGCTTGCTGCCGTACTCGCATTTGTACTGCTCTGCAATGTAGTGCGCGCA
TCGGCGAGCATGATCACAAGTGACATGATCCCCGTTCCAGAAAAACCCAA
GTTGAACGTCTGTGGCTGAAGAGTTTGCTCAGCGGCAAGCTTTCGAGAGT
GTGGACGTTGGTGGTGTGTCTGCCGTGCGCGCCGTGTGTGCCCAGCAACG
CACCGACCACAACCATCACCCCGCCGTTTTCGCCCACCATCTTGCACAGA
TAAGCTGGTTTCCCTGTCAAAGCAACAGCTTCTACCAACCCTTTCTCGCC
GGGCGGGAAAGAGCGTCGCGCCACACGCAACAAGGCTTCTTTTTCATGGT
CGTTCCGGCGGACAAAATGCCCGCAGCAACCACCCGCAGCATGTTGCTCC
TGCTGCTGCTGGCGGCGGCGGCGGTGGTAACTCCGTCCCTAGGATTCGTA
GTGCCGCCAGCGGCACCCGCCGCCGCGGCTCGATGGCAGCCCGTCTGCGG
CGGTTGCAGCACGGCAGCAGCCGGCCAGCCTCGCGCCCAGGGGATGAGGA
CGTACACCATCGGAGCAACGGGGTTGCACGTAAGAAAGTGTTGGTAACTC
TCGCAGCATTGATTGGATGGTGTATCCAAGATGGAGACCGGGGATTCTAA
TTCTGGTCTTTCTCCGAAGGACGCTCCGTGTTTGATGCGTGCTACGTGCA
CGACTACTGTGTGCAGGGCTGTCTCACGTGGTACGCACTCGCGGGCGGTT
TGGTTAGGTGAAGATATGTAAGACACCGGCGCTCAGCAGGTACAGATGTG
CCCGGTGGATGGATGCACACATTCCGTTGATCACAAGATCTGTCTCTTGT
TCTTTGCACGCGTTTTATTCCTTGTTCACAATATGTCTTCGAATATTTCT
CCGCCGTTTCTGAACGTCGCAATTCTGAACGCCGAGGGTTTCGCCCTCGG
ATACCTATCCATACACGTTTCCTTCGTGTCTCGGCGGGGCAACCCTGCGA
TGACTTTGTCCTGTCGCAGATGGTTTCCGTGGCTCGTGGATTCGGAAGAC
ACCGATGGCATCTCACTCCATGCCCATCTCCATCCGCCGCCACCTCCCGC
GGCCTTGCTGGTAGTAACTGCTGTAGACGGGTCGATGGCCCCCACTATCT
ACTGCTGTCCTTACGGGAACAAAGATGTTCAGTGTGCGCGAGATTCACTC
TGTACTGTGTCGGGTTTATTTCTCCGCAGGGCGGCGGCGGTAGTAGCAGC
AGCCGGACGGTGGCGCCGCCGACGATGATGGCGACGCCTCTCCCGGAAAC
GCCCGACGCTCCGCCCACGACGGAGGAGCTGCAGCCGGCGCTGGTGTACG
GGGAGTCGGCGACGCGATCGTTCGTCAAGGCACTCGTCTGGCGGCTCACC
GCGGGGGTGGTCACGTTGGTGAGACGGCGGAAAGGGGTTGGTTGTGGAAA
GTGTTCTTTGCAAGCGCAAGGGCACCACCGTGGTGGTGGTGGTGGTGGGT
TTGTGGGAGGCTCATGCGCTATTCTTCGCGAGGGCAACGCCGAGCACGAT
ACATTCTTCGCCCCATGACAGGAGAGAAGCAACGCCGCACTTATCATACC
ACCGACGGCATCAATAACGATAACTGCTGTTCCGTTTTGTTTTCCCTGTT
TCGCAGATATCCGGGTTGGTGTTCTCGGGAAGCCTGGCCACGGCGATGAG
CATCGTGGGGTCGGACTTCGTCACCAAGAGCGGCTTCATGTTCGCGGGGG
AACGCCTGTGGAACAAGGTGAGCGGCGGCGGCGGCGGCGGTCGATCGACC
GAGAGCGACCTTCTTCGTCGTTTCGAGAAAGACATGATGTATTCTGTTGC
TGGATTCGGCTGTCCCCCGAGCATGCAGTTGGTGGTGGTGGCAACCAGCA
GGAACGAACGAGTTCTAACATGCTAGAAGTAGGTTTTTCCGTCTGTTTCT
GTCGCAAACGATGTTAGCGTTGGCGTGTATGCATGCAATGATTAAAGCAG
GCGGATAGACTTTGTTTTCTCTTGGTTCGAGGTCCGGTCTGGTCGGACAA
ACTCAGCTACTTTGACGTTACGCACGAAATCCAACCGTAGTAGAAGATAC
AAGGCGACGGCCAGGCAAAACGTTCGCATCTATCCGCTCTCCCGCATGCC
TCGCCAGAAAACAAAAATGTTTTTACCGATACAGCATGACGCGCTCGATT
CGTTTTTTTGCTTTCGCACCCCCTCTTCTGGTCCATGCTAGTGAAGCGTA
CGTACCCTGGGCCGGTGACAACCCGGCATAGCGCTCCGTTCCGACATTGT
AGGGACCGACGTCAATGGCCTAACGACTACAGCATGCGTGTACATGAGTG
CCCCCCCCCCCCCTCTCGCGCGTGCCCCCCCGACGGACGAGCCTTTGGCT
ACCTGTTCGTAGGCGTGATGTTTCTTTGTCATCGCGCCGGCTCGCTCGCT
TGCTCGCTCGCTCGCTCACTCGCTTCGTCCCACTGCTGTCCGCGAGAGTG
CAGGTGAAGTGGGGCCAGGACAAGTCCGGGGACAGCACCAAGAGGTCCCT
CGCGAAGGCGGTGTTGTGGCGAGTCTTCGCCGCCTCCAACACACTAATCT
GCGGCGTTTTCCTGGCCAAGGACCTTAGCGTAGCCTCCAAGATCGCCGGC
ACGGATACGCTGTTCAAGACGGTGAGTGAGCGTGCGTTTTTTTTTTTTTT
TTTGCGGAGGCGAGGAAGGCTGGTCGCTGACGCGTTCAACATCTCCGAAA
TCGTAGTTGGGAGGTTTTGGGCGGAGTGGGTGACACGGGAGTTCGCAATC
CGCCGAGAGGGAGTACGGAGCATCTACAACTGAACGAACTTGCGCCGAAG
GACATTCGACGGCGTCTCGTTGAAGTTAACTGCGTTTTCTTGGTGGTCGA
TCGGTTGCCGGGGCTGCGAAAATGGAGCAGGAGAGTGCATATGCACCGAT
GATCGTGCTTGATGGCGAATTCCCAAGCCGGCACCTTACAGCGATTCGCG
TGCGACCATACTCGGAGCCCTTACGGGGCCGCTATTAGGCGTGGCGGGTT
TCTTGGAGCAGGCAATACAGAGCGGGGAGGGGGAGGGCTTCTTGAAGTAC
GAGGGGGTGAACTTGTCCAGGCAGGATCGAAGATTACCACACAGCAGCAG
TGAATCGTGGGTGGTACTTGAAACGATGGCTGGCTCTAAAGTCATGTAAT
AAAGCGTTCGGACGAGCAGCGAGGGACAGCCTCGCTTGCTCCATGTCTGC
GAGCCTGCGAGCCACTCTGTCGTTGTCTACTCTGCGTTAGTCTGTGCGGG
CGTGGTAAGATGCTCACCGTATGACGTGTGCCTCCAAGAGGCGTCAACGG
TACCTGCATGTTGGCCCGGTGCAAACGGCTTGGTAGGTTGTGCCCTGTAT
TGCCTATTCCGCTCCGTCTTATCTTCTCTGTCGGCATGAAATGAAACCCG
CAGATTGCACCAAGGCCACCTCTGCTAAGCAGGCCCTGTGTGTACAGCAC
GGTCAGAAGTCGCTGCGATTGAATTTTCGTTGCGCTCTGCTGGAACAAAA
AGAGGGAAAAAATCGTCGCAGTTGTTAACCCTCCCCCCGATCACCGCCTT
CATTTTGTTGTTTTCCACCCTACAAACAGGCACTTTTCTTCTTGAACGAG
CGAGCGTGGACTAAGATCAACTGGGGCAAGGAGTACGAGCCGGAGTATTA
CCTGTAGGGGTTGCCAACAAGAATATGGGGCGTCGTGGATAATGATAGGT
GGTAGGGGGGGTAGCGAGCCTCTCGTATGGTTACATACGGCCGTGTTGTT
TGTATTTTTATGTTTTTTTTGATGTTGGCTCGTGTGTTGGTGTTGTTCAA
TAGTGATAGTGGAAGCCCCCATGTAGGGTGCGTTGCGTGCCTCTCTTTGT
TGATTTTGCGGAGAGCGAAAGTGCAGCTGGGAAGCATTCCAGCTTGTTCG
TCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCGAACGCTTCACACC
TCTCCTTTGGAGAAGCCACTTCTTCGCCCTGAAACGTATCGAAAATGTAC
GCATTTGCTCTTTTTATGTCGAACTAGTGGACGACGGGCAGCTTGTTTTG
CATTTTGCGGCGTGGTTGATTCACTACTGAGCGTGCTACGGCAGAGTGTC
ATGGTTTTGTTATGGGTTGTGTTGGGCGTGGCCAGTTGGTATTGGCGATG
TGATTTGTTGTTAATGGTGCGGGAGATAGATGAACACACACACAGAGCGA
GAAATGGAGAGCGAGTACATAAGAGGATGGTTAGGAGGCAGAACTTTTCT
TTGGAGTGTACAATTAGCCCTTTTCTTTTTTAACGTGTTGGCTGCGTACT
TCGAGTGTACAATCATCCCTTTTTTGTGTCGGCTGCGTAAAAGAGGGAGC
GATGGCTTTAGCGTCAGTCGCGAGAGTTCTTTGGGATGCCGACGTCATTA
TTTTGTTTTGGTTGGGGCCACCGTAGGGAGCAGCCCCGCCATTCGATCGG
GCTTGCGGGGAATGCGAGGAGGCACGGCGTACAAGGCACAAGGATAGTTG
GGTCGGTGGTGAGATAGGTTCTGCCAGGTGCGTTTTCAGGGGTTGGGTCT
CCTGTTGGATGGCGTAGGTATGTAGGTAGGGAGGTGGGGGGGTGAGGACC
TGCCTGAGCCCGCAGCTTATAGTCACCGCAGTAGATTTTGGATTCCGCGC
GAGCGGCGATGAGTTCAATTTCCCAATGGCAACACCAAGAATTCAAAGTA
TGGGGCATCGATTGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1265:26614..31678-

>mRNA_E-siliculosus-1a_F_contig1265.1633.1 ID=mRNA_E-siliculosus-1a_F_contig1265.1633.1|Name=mRNA_E-siliculosus-1a_F_contig1265.1633.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1560bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1265:26614..31678- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTCGTTCCGGCGGACAAAATGCCCGCAGCAACCACCCGCAGCATGTT
GCTCCTGCTGCTGCTGGCGGCGGCGGCGGTGGTAACTCCGTCCCTAGGAT
TCGTAGTGCCGCCAGCGGCACCCGCCGCCGCGGCTCGATGGCAGCCCGTC
TGCGGCGGTTGCAGCACGGCAGCAGCCGGCCAGCCTCGCGCCCAGGGGAT
GAGGACGTACACCATCGGAGCAACGGGGTTGCACATGGTCGTTCCGGCGG
ACAAAATGCCCGCAGCAACCACCCGCAGCATGTTGCTCCTGCTGCTGCTG
GCGGCGGCGGCGGTGGTAACTCCGTCCCTAGGATTCGTAGTGCCGCCAGC
GGCACCCGCCGCCGCGGCTCGATGGCAGCCCGTCTGCGGCGGTTGCAGCA
CGGCAGCAGCCGGCCAGCCTCGCGCCCAGGGGATGAGGACGTACACCATC
GGAGCAACGGGGTTGCACGGCGGCGGCGGTAGTAGCAGCAGCCGGACGGT
GGCGCCGCCGACGATGATGGCGACGCCTCTCCCGGAAACGCCCGACGCTC
CGCCCACGACGGAGGAGCTGCAGCCGGCGCTGGTGTACGGGGAGTCGGCG
ACGCGATCGTTCGTCAAGGCACTCGTCTGGCGGCTCACCGCGGGGGTGGT
CACGTTGGGCGGCGGCGGTAGTAGCAGCAGCCGGACGGTGGCGCCGCCGA
CGATGATGGCGACGCCTCTCCCGGAAACGCCCGACGCTCCGCCCACGACG
GAGGAGCTGCAGCCGGCGCTGGTGTACGGGGAGTCGGCGACGCGATCGTT
CGTCAAGGCACTCGTCTGGCGGCTCACCGCGGGGGTGGTCACGTTGATAT
CCGGGTTGGTGTTCTCGGGAAGCCTGGCCACGGCGATGAGCATCGTGGGG
TCGGACTTCGTCACCAAGAGCGGCTTCATGTTCGCGGGGGAACGCCTGTG
GAACAAGATATCCGGGTTGGTGTTCTCGGGAAGCCTGGCCACGGCGATGA
GCATCGTGGGGTCGGACTTCGTCACCAAGAGCGGCTTCATGTTCGCGGGG
GAACGCCTGTGGAACAAGGTGAAGTGGGGCCAGGACAAGTCCGGGGACAG
CACCAAGAGGTCCCTCGCGAAGGCGGTGTTGTGGCGAGTCTTCGCCGCCT
CCAACACACTAATCTGCGGCGTTTTCCTGGCCAAGGACCTTAGCGTAGCC
TCCAAGATCGCCGGCACGGATACGCTGTTCAAGACGGTGAAGTGGGGCCA
GGACAAGTCCGGGGACAGCACCAAGAGGTCCCTCGCGAAGGCGGTGTTGT
GGCGAGTCTTCGCCGCCTCCAACACACTAATCTGCGGCGTTTTCCTGGCC
AAGGACCTTAGCGTAGCCTCCAAGATCGCCGGCACGGATACGCTGTTCAA
GACGGCACTTTTCTTCTTGAACGAGCGAGCGTGGACTAAGATCAACTGGG
GCAAGGAGTACGAGCCGGAGTATTACCTGTAGGCACTTTTCTTCTTGAAC
GAGCGAGCGTGGACTAAGATCAACTGGGGCAAGGAGTACGAGCCGGAGTA
TTACCTGTAG
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