prot_E-siliculosus-1a_F_contig1265.1633.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1265.1633.1
Unique Nameprot_E-siliculosus-1a_F_contig1265.1633.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length260
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A6H5KZ71_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ71_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 3.370e-139
Identity = 208/229 (90.83%), Postives = 213/229 (93.01%), Query Frame = 0
Query:   32 LGFVVPXAA-PAAAARWQPVCGGCSTAAAGQPRAQGMRTYTIGATGLHGGXXXXXXXTVAPPTMMATPLPETPDAPPTTEELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 259
            LGFVVP AA PA+AARWQPVC G STAAAGQPRAQG + Y IGA GLHGG       TVAPPTMMATPLPETPDAPPTTEEL+PALVYGESA RSFVKALVWRLTAGVVTL+SGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKI+WGKEYEPEYYL
Sbjct:   17 LGFVVPPAAAPASAARWQPVCRGSSTAAAGQPRAQGTKAYAIGAKGLHGGAGGSRSRTVAPPTMMATPLPETPDAPPTTEELRPALVYGESAARSFVKALVWRLTAGVVTLVSGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKIDWGKEYEPEYYL 245          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A836CRK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK4_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.040e-63
Identity = 100/145 (68.97%), Postives = 117/145 (80.69%), Query Frame = 0
Query:  115 ALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 259
            AL + E+  RS  KA+VWR+TA V+TLISGLVFS +L TA SIVGSDFVTKSGFMF GER+WNKV WG+    D  KRSLAKA+LWRVFAA NTLICG FLA DLSVA KIAG+DT+FKT LF++NER W ++ WGKEYE E+ +
Sbjct:  103 ALYFTETTMRSLAKAVVWRVTAAVITLISGLVFSKNLKTAASIVGSDFVTKSGFMFLGERVWNKVNWGKGAKTDGAKRSLAKALLWRVFAAGNTLICGAFLAGDLSVALKIAGSDTVFKTFLFYINERMWARVEWGKEYEIEFVI 247          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A835YMA1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA1_9STRA)

HSP 1 Score: 200 bits (509), Expect = 9.640e-62
Identity = 100/160 (62.50%), Postives = 120/160 (75.00%), Query Frame = 0
Query:  100 PETPDAPPTTEELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 259
            P T  A P+T  L+ AL + E+  RS  KA+VWR+ A V+TL SGLVFS +L  A SIVGSDFVTKSGFMF GER WNKV WG+    D  KRSLAKA+LWRVFA  NTLICG FLA DLSVA KIAG+DT+FKT LF++NER W ++ WGKEY+ ++ +
Sbjct:    1 PSTAAATPSTANLK-ALYFTETTMRSLAKAIVWRVAAAVITLASGLVFSKNLRMAASIVGSDFVTKSGFMFLGERAWNKVNWGKGAKTDGAKRSLAKALLWRVFATGNTLICGAFLAGDLSVALKIAGSDTVFKTILFYINERMWARVEWGKEYDADFVI 159          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7S2UXG1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXG1_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.480e-53
Identity = 83/151 (54.97%), Postives = 113/151 (74.83%), Query Frame = 0
Query:  114 PALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSG-------DSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEY 257
            P + + E+  RS VKAL+WRLTAG++T I+  +FSG L+TA  IVG DFV+K+GFM+ GER+W+KV WG+ K         DS  RSL KA++WR FAA+NTL+   F+AKD+S+A KIA +DT+FKT LF++NER W+++ WGKEY+ EY
Sbjct:   75 PEVPFTETNKRSIVKALLWRLTAGIITFITSFIFSGDLSTAAKIVGGDFVSKAGFMYVGERVWSKVNWGRTKGNKDSKTAMDSKSRSLTKALVWRAFAATNTLVMSFFMAKDVSIAGKIASSDTVFKTFLFYINERIWSRVEWGKEYQLEY 225          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7R9ZQP1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQP1_9STRA)

HSP 1 Score: 171 bits (434), Expect = 4.210e-50
Identity = 85/145 (58.62%), Postives = 103/145 (71.03%), Query Frame = 0
Query:  111 ELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEP 255
            E  P   + E+  RS VKA  WR+ AG VT  + L FSGSLATA+SIVGSDF +KS  MF GERL NK   G+   GD   RSLAKA++WR+FA  NTL   +F+AKD+S+ASKIAG+D +FKTAL F  ERAW K+ WGKEY+P
Sbjct:   33 ESAPQGSFSETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDP 177          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7R9ZQR0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQR0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 6.450e-49
Identity = 85/145 (58.62%), Postives = 103/145 (71.03%), Query Frame = 0
Query:  111 ELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEP 255
            E  P   + E+  RS VKA  WR+ AG VT  + L FSGSLATA+SIVGSDF +KS  MF GERL NK   G+   GD   RSLAKA++WR+FA  NTL   +F+AKD+S+ASKIAG+D +FKTAL F  ERAW K+ WGKEY+P
Sbjct:  125 ESAPQGSFSETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDP 269          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A448ZGE6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGE6_9STRA)

HSP 1 Score: 171 bits (432), Expect = 8.420e-49
Identity = 85/146 (58.22%), Postives = 107/146 (73.29%), Query Frame = 0
Query:  114 PALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 259
            PA  + E+  RS VKAL+WR+ AG VT I+   FSGS+ATA+SIVGSDF++KS  MF GERL NK + G+    D   RSL KA++WR+FA  NTL   +F+AKD+S+ASKIAG+D +FKTAL F+ ER W KI WGKEY+ EY L
Sbjct:  113 PAANFSETTGRSAVKALMWRVIAGSVTFITSFKFSGSVATALSIVGSDFLSKSFTMFIGERLMNKSQAGRKSGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDISIASKIAGSDAIFKTALMFVYERVWAKIEWGKEYQVEYNL 258          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7S1Y2U4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2U4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.990e-47
Identity = 85/144 (59.03%), Postives = 103/144 (71.53%), Query Frame = 0
Query:  114 PALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEY 257
            P   + E+  RS VKA  WRL AG VT ++ L FSGSL TA++IVGSDF +K+  MF GERL NK   G+    D  KRSLAKA+LWR+FA +NTL   VF+AKDLS+ASKIAG+D +FKTAL F  ER W KI WGKEY+ E+
Sbjct:  105 PGGTFSETTGRSAVKAFCWRLIAGSVTFVTSLRFSGSLKTALTIVGSDFFSKAFTMFIGERLMNKSNAGRKGGADDVKRSLAKALLWRLFAIANTLTMAVFIAKDLSMASKIAGSDAIFKTALMFGYERVWAKIEWGKEYQVEF 248          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A1E7EW78_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW78_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.960e-46
Identity = 76/142 (53.52%), Postives = 105/142 (73.94%), Query Frame = 0
Query:  118 YGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 259
            + E+  RS VKAL+WR+ AG VT I+ L FSGS+ TA++IVGSDF++K+  MF GERL NK   G++   D   RSL KA++WR+FA  NTL   +F+AKD+++ASKIAG+D +FKT L F+ ER W KI WGKEY+ ++++
Sbjct:   44 FSETTARSAVKALMWRVIAGSVTFITSLRFSGSMKTALTIVGSDFLSKAFTMFIGERLMNKSNAGRESGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDITMASKIAGSDAIFKTGLMFVYERVWAKIEWGKEYQVDFFI 185          
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Match: A0A7S1B4Q8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4Q8_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.490e-46
Identity = 78/142 (54.93%), Postives = 105/142 (73.94%), Query Frame = 0
Query:  118 YGESATRSFVKALVWRLTAGVVTLISGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWGKEYEPEYYL 259
            + ES TRS VK+++WR+ AG VT I+ L FSGS+  A+SIVGSDF +K+  MF GERL N    G+  SGD+ KRSL KA++WR+FA +NTL   VF+AKDLS+ASKIA +D + KT + +  ER W+K+ WGKEYE E+++
Sbjct:  161 FKESTTRSLVKSIMWRMVAGTVTFITSLRFSGSVKVALSIVGSDFFSKALTMFLGERLMNNSSLGRGSSGDNKKRSLIKALIWRLFAIANTLTVAVFVAKDLSIASKIASSDAVIKTTMMYFYERIWSKVEWGKEYEAEFFI 302          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1265.1633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ71_9PHAE3.370e-13990.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CRK4_9STRA3.040e-6368.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMA1_9STRA9.640e-6262.50Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2UXG1_9STRA1.480e-5354.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9ZQP1_9STRA4.210e-5058.62Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7R9ZQR0_9STRA6.450e-4958.62Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A448ZGE6_9STRA8.420e-4958.22Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1Y2U4_9STRA2.990e-4759.03Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7EW78_9STRA1.960e-4653.52Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1B4Q8_9STRA3.490e-4654.93Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018638Domain of unknown function DUF2061, membranePFAMPF09834DUF2061coord: 194..244
e-value: 1.2E-13
score: 51.4
coord: 127..177
e-value: 1.7E-11
score: 44.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..259
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.864
NoneNo IPR availableTMHMMTMhelixcoord: 197..216
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 137..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1265contigE-siliculosus-1a_F_contig1265:27672..31033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1265.1633.1mRNA_E-siliculosus-1a_F_contig1265.1633.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1265 26614..31678 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1265.1633.1 ID=prot_E-siliculosus-1a_F_contig1265.1633.1|Name=mRNA_E-siliculosus-1a_F_contig1265.1633.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=260bp
MVVPADKMPAATTRSMLLLLLLAAAAVVTPSLGFVVPPAAPAAAARWQPV
CGGCSTAAAGQPRAQGMRTYTIGATGLHGGGGSSSSRTVAPPTMMATPLP
ETPDAPPTTEELQPALVYGESATRSFVKALVWRLTAGVVTLISGLVFSGS
LATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLW
RVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKINWG
KEYEPEYYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018638DUF2061_membrane