mRNA_E-siliculosus-1a_F_contig1016.163.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Match: A0A6H5JEG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEG7_9PHAE) HSP 1 Score: 3353 bits (8693), Expect = 0.000e+0 Identity = 2344/2859 (81.99%), Postives = 2387/2859 (83.49%), Query Frame = 2 Query: 56 MPTSPGDGVVNTTTGAPGXXXXXXXXXXXXXXXXXXXXTTKKSFASKNLNALTKAPAVQSRGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGVGWGAGKVTAPAPAVAEPAPAGPARDDRSAPPMAGXXXXXXXXXXXXXYGHDNRSAGPPGSSRWPNNDXXXXXXXXXXXRSDPRSYPPPRAPSGRPHFSQRXXXXXXXXRDGSPAGRENGMGGGXXXXXXXXXXXXXXXXGMQGHYLRESDFPLEMGGGASRAEKSPQLRPRGGTGPDTSQGKGDPPPSASPAXXXXXXXXXXXXXXXXXXXXXXXNNSPSPSSYAMAPSSGPRDHDGMPSPVGGGRYGDGGDHYGHHGPPSVPSRLSGRGGSSFGSRLAGYGGTANESARGDYTRGGXXXXXXXXXXXXXXXXXXXXRGWSGGWDGGRGREWDRGXXXXXXXXXXRELDWEHRRKXXXXXXXXXXXGPDRGGGGGRSSREWGERENRGAGRGSFNSPSMTGMASPDPYSSLGRMSRRPLEGGQPNGVARPPPSSPAAAXXXXXXXXXXXXXXXPGAAQPPTVTAVVTETKRPMSEEERKNHAEAVXXXXXXXXXXXXXXAEKSDEVEKGVALRARXXXXXXXXXXXXXXXXXXXNARSRTDGQETGSQQQEGADDTEEGRGYEPDEYGRDDPYRRQEDVERERAAQQAAAAALSPAFGPMSSSDRSASAWTLGXXXXXXXXXKARPKAVKAVLGRGEEEAVEAGTGARVIQKRQVPPAVVVKVAVAAAAPAAAEKVASESPAVKPTPHTKSRTAEPSKLLLSGKGGANLHAAAAAGGRGKALPSGGDSGSSVSLQWLTPRREGEAGEAHSRSQRGGQAEHKGGDPSAPPPPRTPPCPASAQGARSFSSLFAGAGQQXXXXXQHAGAQRPGDAGVEGQMWGGEGGEGGHDHDRDWPEAGRGPPPPPSREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGPQDARLDGRTPTQQXXXXXXXXXXXXXXXXXXXXXXAKSGQHHQSPRQQPSSRGGPSGPPSDSTRMGGRGANDVAVAAESPETREVAGQAQSLQQQDSRFGGHRSSXXXXXXXXXXPAPREHEGGRGWDQRREFSGGRGRGGGRGGRGGWDEREXXXXXXXXXGWGRGGRGGEGVFVRDGNPGDKKVWERGVQQPVAAGDGRGGVSREEAWDRQPKHAPSSRRRASPLDNPPTPDSSPXXXXXXXXXXXXXXXXXXXXX----GVRIAHRXXXXXXXXXXXXXXXXXXXXXXXXXSAWGGGKGTATNAPLPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----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--WLIAGTGGMVPAQSSHPRPPRGAQVSVPRPSQGSPSGGWGAAGKVRSVAVRGTAVPTSTSSRRPTGTAVHGRGSPGRQGNGXXXXXXXXXAQNVGSSTAAAGKKAKKTNSQALYVPKRSTPRGPGSGSNAQPNAGSASVAAVPAAGS 8599
MPTSPGDGVV TTTGAPG XXXXXXXXXXX T+KKSFASKNLNALTKAPAVQ RGSDRAGEVVRPA+GAGGRLLVLG+KNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGG+GWGAGKVTAPAP VAEPAPAGPARDDRSAPPMAG XXXXXXXXX YGHDNRSAGP SSRWPNNDXXXXXXXXXXX GR XXXXXXXXRDGSPAGRENGMG G GMQGHYLRESDFPLEMGGGASRAEK+PQLRPRGGTGPDTSQGKGDPPP ASP+ NNSPSPSS+AMAPSSGPRD DGMPSP+GGGRYGDGGDH+GHHGPPSVPSRLSGRG S FGSRLAGYGGTANESARGDYTRGGXXXXXXXXXXXXXXXXXX RGWSGGWDGGRGREWDRG RELDWEHRRKXXXXXXXXXXX GGGGRSSREWGERENRGAGRGSF SPSMTGMASPDPYSSLGRMSRRPLEGGQP+GVARPPPSSPAA XXXXXXXXXXXXXXX T TAVV+ETKRPMSEEERKNHAEAV AEKSDEVEKGVALRAR XXXX TDGQETGS+Q +T EGRGYEPDEYGRDDPYR DVERERAAQQAAAAALSPAFGPMSS+DRSASAW L XXXXXXXKAR KAVKAVLGRGEEEAVEAGTGARVIQKRQVPPA VVKVA AA SESPAVKP PHTKSRTAEPSKLLLSGKGG NLHAAAAAGGRGKA PSGG+SGSSVSLQWLTPR EGEAGEAHSRSQRGGQAEH GDPSAPP TPPCPASAQGARSFSSLFAGAGQQ QH GAQRPGDAGVEGQMW GEG E GHDHDRDWPEAGRGP SREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGPQDARLDGRTPTQQXXXXXXXXX AKSGQHHQSPRQQPSSRGGPSGPPSDS + GGRGANDVAVAAESPE R+VAGQAQSLQQQDSRFGGH S APREHEGG GWDQRREFSGGRGRG GRGGRGGWDEREXXXXXXXX G GRGGRGGEGVFVRDG PGD KVWERGVQQPV A GRGGV+REEAWDRQ KHA SSRRRASPLDNPPTPDSSPXXXXXXXXXXXXXXXXXXXXX G+RIAHRXXXXXXXXXXXXXXXXXXXXXXXXX KGT T+ PL XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXA LESREAIRARDERERDLAVRQRKSMKMDLNAASAPRDAAGVKQHQQRPKRDGHDKKD EKARRAERDR RREKRHDDTERQRNRSEAG RARR ARRKESSERPPRTSGALYRY SPD+APGGGSGVSE+VVYVNADIPEGAPDPLQARWNAM EESDRXXXXXXXXXXXXXXXXXXXXXXXXXYSKKDPREKHHTHESAPRNTRDRDV ASFPTNPGASGGKDRHSNGA G R GGEGVKGKE LVSSARADGAGRNARARDFPDRGGGEHGDREKGRGRKATG KEGA XXXXXXXXXXXXXXXXXXX LAGGASGYTGSGVSGXXXXXXXXXXXTPGRVVVDKD HLGMNVNMSEFDTAEFEVVKSRREVQKERKEXXXXXXXX XXXXXXXXXXXXXXXX QIKAQLELNKA XXXXXXXXXXXXXXXXXX ASMSEQ RRSDQEASSREKANASTH PPA AATT SAPVASVK+QDNGKSP VTT XXXXX SA SSVPSRAGHSNARPDGAFP EPASSPK TQSSKSP+VLPPLSPAKTTRPLSPAIQFGSVGAD+ AGWSATPKNEGKTL D AGA AESGG VADGERSG PAFGPETTPEVCAPSRNGEAGPSSGASKSRHDAPRPNVPRP DKSPPLGEGALPEVGVVEPTRE+GL+PPSKQQQPAS LSGENDKQGE NGK E ES HSDDRGGG+EPESDTRA PPTS PSGVQQPALNPSSQSTSHGRPPPVA+GLLSSPSLAGSIPAPHT ASWKPLPVGLASAVLSTGNGVAAVGAGA G NNKPHNKNSEWA GRGGYNGFGAGG+G+GEQQGPG+FGQNNVSTA GAT PVYGFGGPQRGNFGPNSAPAALGAAGW+TASV NPLQNGGVVGMLGANGGGNSVGGRLRSAPEAFGLGAGPSQV+PR GYGRLA RPPAMVRGANGGRDGSPGQPHNRAND QT RLATSVA GMAGGPFGGFVLGHH SPGARQPPIPPGGI AWTGGFPQAGGGSPGGARMTGV+G XXXXXXXXXXXXXXXXXXXXXXXXXPFYGSFAGGV PPGSTGLMVPSTQPTM VA WQQPASQH+V SV +MAEGGNSGLAAEAAPFIPAGAMGVG AMWGMAGPQ QQQ TGVGA SPGAASVNAINP ML+ PTMGGQGV+FGASAVPPGRPTPSPARFATQQGLQQVQ XXXXXXXXXXXXXXXXXXXXXXXX WLIAGTGGMVPAQSSHPRPPRGAQ+S PRPSQGSPSGGWGAAGK S+AVRGTAVP+S SSRRPTGTAVHGRGSPGRQGNGXXXXXXXXX GK+AKKTNSQALYVPKRSTPRGPGS SNAQPNAGSASVAAVPAAGS
Sbjct: 1 MPTSPGDGVVRTTTGAPGPSPSDXXXXXXXXXXXGAGTTSKKSFASKNLNALTKAPAVQ-RGSDRAGEVVRPAFGAGGRLLVLGTKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGIGWGAGKVTAPAPTVAEPAPAGPARDDRSAPPMAGGGRXXXXXXXXXGYGHDNRSAGPTRSSRWPNNDXXXXXXXXXXXXXXXXXXXXXXXXXGRXXXXXXXXXXXXXXRDGSPAGRENGMGAGGYGGQGRLGGGPPGGGGMQGHYLRESDFPLEMGGGASRAEKAPQLRPRGGTGPDTSQGKGDPPPFASPSGGSREGQQTRAAAAVGRAGGNG-NNSPSPSSHAMAPSSGPRDLDGMPSPLGGGRYGDGGDHFGHHGPPSVPSRLSGRGASPFGSRLAGYGGTANESARGDYTRGGXXXXXXXXXXXXXXXXXXGGRGWSGGWDGGRGREWDRGRGQPPPHPRERELDWEHRRKXXXXXXXXXXXXXXXXGGGGRSSREWGERENRGAGRGSFRSPSMTGMASPDPYSSLGRMSRRPLEGGQPSGVARPPPSSPAAXXXXXXXXXXXXXXXXXXXXX--TATAVVSETKRPMSEEERKNHAEAVAEEAKAFAERERRLAEKSDEVEKGVALRARRELERLRAEKDKGKEXXXXXXXXXTDGQETGSRQXXXXGNTXEGRGYEPDEYGRDDPYRXXXDVERERAAQQAAAAALSPAFGPMSSADRSASAWALAGGXXXXXXXKARLKAVKAVLGRGEEEAVEAGTGARVIQKRQVPPAAVVKVAAEEAAXXXXXXXXSESPAVKPAPHTKSRTAEPSKLLLSGKGGTNLHAAAAAGGRGKAPPSGGNSGSSVSLQWLTPRHEGEAGEAHSRSQRGGQAEHNSGDPSAPPAHCTPPCPASAQGARSFSSLFAGAGQQQKQKHQHTGAQRPGDAGVEGQMWEGEGRESGHDHDRDWPEAGRGPXXXXSREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGPQDARLDGRTPTQQXXXXXXXXXPRLLQSSGNGN--AKSGQHHQSPRQQPSSRGGPSGPPSDSPQTGGRGANDVAVAAESPEMRKVAGQAQSLQQQDSRFGGHLPSSATAAA-----APREHEGGSGWDQRREFSGGRGRGAGRGGRGGWDEREXXXXXXXXGGTGRGGRGGEGVFVRDGKPGDNKVWERGVQQPVVASGGRGGVNREEAWDRQQKHATSSRRRASPLDNPPTPDSSPXXXXXXXXXXXXXXXXXXXXXXXXXGLRIAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTTTDTPLXXXXXXXXXXXXXQQPSSNHQDSLVASAGTSXXXXXXXXXXXXXXXXXXXXXAAAAAALESREAIRARDERERDLAVRQRKSMKMDLNAASAPRDAAGVKQHQQRPKRDGHDKKDAEKARRAERDRTRREKRHDDTERQRNRSEAGGRARREARRKESSERPPRTSGALYRYGSPDLAPGGGSGVSEYVVYVNADIPEGAPDPLQARWNAMTEESDRXXXXXXXXXXXXXXXXXXXXXXXXXYSKKDPREKHHTHESAPRNTRDRDVRASFPTNPGASGGKDRHSNGAAGGGGTAVKERRDQARNEVRRNQSQQQSAPISSGPREGGEGVKGKEGLVSSARADGAGRNARARDFPDRGGGEHGDREKGRGRKATGDKEGAAAALMKKQELAKEQXXXXXXXXXXXXXXXXXXXKMKRGGGEEATAA-------LAGGASGYTGSGVSGXXXXXXXXXXXTPGRVVVDKDCHLGMNVNMSEFDTAEFEVVKSRREVQKERKEXXXXXXXXAXXXXXXXXXXXXXXXXQAARGQIKAQLELNKAETRKATEVKAKXXXXXXXXXXXXXXXXXXV----ASMSEQDRRSDQEASSREKANASTHEPPAPAATTSSAPVASVKRQDNGKSP-VTTAXXXXXXXXXSAPTSSVPSRAGHSNARPDGAFPAEPASSPKATQSSKSPVVLPPLSPAKTTRPLSPAIQFGSVGADNGAGWSATPKNEGKTLVDCAGAYAESGGGVADGERSGLPAFGPETTPEVCAPSRNGEAGPSSGASKSRHDAPRPNVPRPGDKSPPLGEGALPEVGVVEPTREVGLNPPSKQQQPASILSGENDKQGERNGKDETESTHSDDRGGGQEPESDTRASPPTSPPSGVQQPALNPSSQSTSHGRPPPVAEGLLSSPSLAGSIPAPHTQASWKPLPVGLASAVLSTGNGVAAVGAGAGGYNNKPHNKNSEWAPGRGGYNGFGAGGTGYGEQQGPGNFGQNNVSTAFGATHPVYGFGGPQRGNFGPNSAPAALGAAGWNTASVFNPLQNGGVVGMLGANGGGNSVGGRLRSAPEAFGLGAGPSQVVPRAGYGRLAQRPPAMVRGANGGRDGSPGQPHNRANDPGQTVRLATSVAAGMAGGPFGGFVLGHH-SPGARQPPIPPGGIQAWTGGFPQAGGGSPGGARMTGVNGXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXPFYGSFAGGVTPPGSTGLMVPSTQPTMQVARWQQPASQHIVTSVVATAASAASNPPLSMAEGGNSGLAAEAAPFIPAGAMGVGSPAMWGMAGPQTQQQPTGVGAPSPGAASVNAINPTMLTLPTMGGQGVSFGASAVPPGRPTPSPARFATQQGLQQVQXXXXXXXXXXXXXXXXXXXXXXXXXXXWLIAGTGGMVPAQSSHPRPPRGAQLSGPRPSQGSPSGGWGAAGKAHSIAVRGTAVPSSNSSRRPTGTAVHGRGSPGRQGNGXXXXXXXXXXXXXXXXXXXXGKRAKKTNSQALYVPKRSTPRGPGSESNAQPNAGSASVAAVPAAGS 2831
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Match: D8LL01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL01_ECTSI) HSP 1 Score: 2339 bits (6061), Expect = 0.000e+0 Identity = 1901/2153 (88.30%), Postives = 1914/2153 (88.90%), Query Frame = 2 Query: 56 MPTSPGDGVVNTTTGAPGXXXXXXXXXXXXXXXXXXXXTTKKSFASKNLNALTKAPAVQSRGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGVGWGAGKVTAPAPAVAEPAPAGPARDDRSAPPMAGXXXXXXXXXXXXXYGHDNRSAGPPGSSRWPNNDXXXXXXXXXXXRSDPRSYPPPRAPSGRPHFSQRXXXXXXXXRDGSPAGRENGMGGGXXXXXXXXXXXXXXXXGMQGHYLRESDFPLEMGGGASRAEKSPQLRPRGGTGPDTSQGKGDPPPSASPAXXXXXXXXXXXXXXXXXXXXXXXN---NSPSPSSYAMAPSSGPRDHDGMPSPVGGGRYGDGGDHYGHHGPPSVPSRLSGRGGSSFGSRLAGYGGTANESARGDYTRGGXXXXXXXXXXXXXXXXXXXXRGWSGGWDGGRGREWDRGXXXXXXXXXXRELDWEHRRKXXXXXXXXXXXGPDRGGGGGRSSREWGERENRGAGRGSFNSPSMTGMASPDPYSSLGRMSRRPLEGGQPNGVARPPPSSPAAAXXXXXXXXXXXXXXXPGAAQPPTVTAVVTETKRPMSEEERKNHAEAVXXXXXXXXXXXXXXAEKSDEVEKGVALRARXXXXXXXXXXXXXXXXXXXNARSRTDGQETGSQQQEGADDTEEGRGYEPDEYGRDDPYRRQEDVERERAAQQAAAAALSPAFGPMSSSDRSASAWTLGXXXXXXXXX-KARPKAVKAVLGRGEEEAVEAGTGARVIQKRQVPPAVVVKVAVAAAAPAAAEKVASESPAVKPTPHTKSRTAEPSKLLLSGKGGANLHAAAAAGGRGKALPSGGDSGSSVSLQWLTPRREGEAGEAHSRSQRGGQAEHKGGDPSAPPPPRTPPCPASAQGARSFSSLFAGAGQQXXXXXQHAGAQRPGDAGVEGQMWGGEGGEGGHDHDRDWPEAGRGPPPPP-SREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGPQDARLDGRTPTQQXXXXXXXXXXXXXXXXXXXXXXAKSGQHHQSPRQQPSSRGGPSGPPSDSTRMGGRGANDVAVAAESPETREVAGQAQSLQQQDSRFGGHRSSXXXXXXXXXXPAPREHEGGRGWDQRREFSGGRGRGGGRGGRGGWDEREXXXXXXXXXGWGRGGRGGEGVFVRDGNPGDKKVWERGVQQPVAAGDGRGGVSREEAWDRQPKHAPSSRRRASPLDNPPTPDSSPXXXXXXXXXXXXXXXXXXXXX--GVRIAHRXXXXXXXXXXXXXXXXXXXXXXXXXSAWGGGKGTATNAPLPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ALESREAIRARDERERDLAVRQRKSMKMDLNAASAPRDAAGVKQHQQRPKRDGHDKKDDEKARRAERDRVRREKRHDDTERQRNRSEAGVRARRSARRKESSERPPRTSGALYRYCSPDVAPGGGSGVSEHVVYVNADIPEGAPDPLQARWNAMAEESDRXXXXXXXXXXXXXXXXXXXXXXXXXYSKKDPREKHHTHESAPRNTRDRDVIASFPTNPGASGGKDRHSNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARGGGEGVKGKEVLVSSARADGAGRNARARDFPDRGGGEHGDREKGRGRKATGGKEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGGASGYTGSGVSGXXXXXXXXXXX--TPGRVVVDKDDHLGMNVNMSEFDTAEFEVVKSRREVQKERKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIKAQLELNKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMSEQVRRSDQEASSREKANASTHGPPAQAATTGSAPVASVKKQDNGKSPEVTTXXXXXXATQPSALASSVPSRAGHSNARPDGAFPTEPASSPKETQSSKSPIVLPPLSPAKTTRPLSPAIQFGSVGADDDAGWSATPKNEGKTLADSAGACAESGGKVADGERSGPPAFGPETTPEVCAPSRNGEAGPSSGASKSRHDAPRPNVPRPSDKSPPLGEGALPEVGVVEPTREIGLSPPSKQQQPASNLSGENDKQGETNGK 6484
MPTSPGDGVV+TTTGAPGXXXXXXXXXXXXXXXXXXXXTTKKSFASKNLNALTKAPAVQ RGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGVGWGAGKVTAPAPAVAE APAGPARDD XXXXXXXXXXXXX XXXXXXXXXXXRSDPRSYPPPRAPSGRPHF QR XXXXXXX GSPAGRENGMG G XXXXXXXXGMQGHYLRESDFPLEMGGGASRAEKSPQLRPRGGTGPDTSQGKGDPP XXXXXXXXXXXXXXXXXXXXXXX NSPSPSS+AMAPSSGPRDHDGMPSP+GGGRYGDGGDHYGHHGPPSVPSRLSGRGGSSFGSRLAGYGGTANESARGDYTRGGXXXXXXXXXXXXXXXXXX RGWSGGWDGGRGREWDRGXX RELDWEHRRKXXXXXXXXXXX PDRGGGGGRSSREWGER+NRGAGRGSFNSPSMTGMASPDPYSSLGRMSRRPLEGGQPNGVARPPPSSPAAAXXXXXXXXXXXXXXX XXXXXXXXXXXXXX EKSDEVEK VALRAR XXXXXXXXXXXXXXXXNARSRTDGQE GSQQQ GADDTEEGRGYEPDEYGRDDPYRRQEDVERERAAQQAAAAALSPA GPMSS+DRSASAW LGXXXXXXXXX KARPKAVKAVLGRGEEEAVEAGTGARVIQKRQVPP AEKVASESPAVKP PHTKSRTAEPSKLLLSGKGGANLHAAAAAGGRGKA SGGDSGSSVSLQWLTPRREGEAGEAH RSQRGGQAEHKGGDPSAPPPPRTPPCPASAQGARSFSSLFAGAGQ XXXXX AGAQRPGDAGVEGQMWGGE SREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGPQDARLDGRTPTQQXXXXXXXXXXXX AKSGQHHQSPRQQ SSRGGPSGPPSDS R GGRGANDVAVAAESPETREVAGQAQSLQQQDSRFGGHRSS APREHEGGRGWDQRREFSGGRGRG GRGGRGGWDERE XXXXXXX GWGR RGGEGVFVRDGNPGDKKVWERGVQQPVAA GRGGV+REEAWDRQPKHAPSSRRRASPLDNPPTPDSSPXXXXXXXXXXXXXXXXXXXXX GVRIAHRXXXXXXXXXXXXXXXXXXXXXXXXX KGT TNAPLP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALESREAIRARDERERDLAVRQRKSMK+DLNAASAPRDAAGVKQHQQRPKRD HDKKD EKARRAERDRVRREKRHDDTERQRNRSEAGVRARR ARRKESSERPPRTSGALYRY SPDVAPGGGSGVSEHVVYVNADIPEGAPDPLQARWNAMAEESDRXXXXXXXXXXXXXXXXXXXXXXXXXYSKKDPREKHHTHESAPRNTRDRDVIASFPTNPGASGGKDRHSNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GEGVKGKE LVSSARADGAGRNARARDFPDRGGGEHGDREKGRGRKATGGKEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGGASGYTGSGVSG XXXXXXXXXX TPGRVVVDKDDHLGMNVNMSEFDTAEFEVVKSRREVQKER XXXXXXXXXXXXXXXXXXXXXXXXXXXX QIKAQLELNKA XXXXXXXXXXXXXXXXXXXXXXXXXX ASMSEQVRRSDQEASSREKANASTHGPPAQAATTGSAPVASVKKQDNGKSPEVTT A QPSA ASSVPSRAGHSNARPDGA P EPASSPK TQSSK +VLPPLSPAKTTRPLSPAIQFGSVGADDDAGWSATPKN+GK L DSAGACAESGG+VADGERSGP AFGPETTPEVCAPSRNGEAGPSS ASKSRHDAPRPNVPRPSDKSPPLGEGALPEVGVVEPTRE+GL+PPSKQQQPASNLSG+NDKQGE NGK
Sbjct: 1 MPTSPGDGVVSTTTGAPGXXXXXXXXXXXXXXXXXXXXTTKKSFASKNLNALTKAPAVQ-RGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGVGWGAGKVTAPAPAVAELAPAGPARDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDPRSYPPPRAPSGRPHFGQRGXXXXXXXXXGSPAGRENGMGAGGYVGQGRSXXXXXXXXGMQGHYLRESDFPLEMGGGASRAEKSPQLRPRGGTGPDTSQGKGDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSPSPSSFAMAPSSGPRDHDGMPSPLGGGRYGDGGDHYGHHGPPSVPSRLSGRGGSSFGSRLAGYGGTANESARGDYTRGGXXXXXXXXXXXXXXXXXXGGRGWSGGWDGGRGREWDRGXXQPPPHPRERELDWEHRRKXXXXXXXXXXXXPDRGGGGGRSSREWGERDNRGAGRGSFNSPSMTGMASPDPYSSLGRMSRRPLEGGQPNGVARPPPSSPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXEKSDEVEKSVALRARMELXXXXXXXXXXXXXXXXNARSRTDGQEAGSQQQGGADDTEEGRGYEPDEYGRDDPYRRQEDVERERAAQQAAAAALSPALGPMSSADRSASAWALGXXXXXXXXXXKARPKAVKAVLGRGEEEAVEAGTGARVIQKRQVPPXXXXXXXXXXXXXXXAEKVASESPAVKPAPHTKSRTAEPSKLLLSGKGGANLHAAAAAGGRGKAPSSGGDSGSSVSLQWLTPRREGEAGEAHLRSQRGGQAEHKGGDPSAPPPPRTPPCPASAQGARSFSSLFAGAGQXXXXXXXXAGAQRPGDAGVEGQMWGGEXXXXXXXXXXXXXXXXXXXXXXXXSREHKQIFDHKTGKMRDVEDSDKLRAPSDRPRGPQDARLDGRTPTQQXXXXXXXXXXXXGNGN------AKSGQHHQSPRQQVSSRGGPSGPPSDSPRTGGRGANDVAVAAESPETREVAGQAQSLQQQDSRFGGHRSSCAAA-------APREHEGGRGWDQRREFSGGRGRGVGRGGRGGWDEREGXXXXXXXGGWGRXXRGGEGVFVRDGNPGDKKVWERGVQQPVAASGGRGGVNREEAWDRQPKHAPSSRRRASPLDNPPTPDSSPXXXXXXXXXXXXXXXXXXXXXXXGVRIAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTTTNAPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALESREAIRARDERERDLAVRQRKSMKIDLNAASAPRDAAGVKQHQQRPKRDDHDKKDAEKARRAERDRVRREKRHDDTERQRNRSEAGVRARREARRKESSERPPRTSGALYRYGSPDVAPGGGSGVSEHVVYVNADIPEGAPDPLQARWNAMAEESDRXXXXXXXXXXXXXXXXXXXXXXXXXYSKKDPREKHHTHESAPRNTRDRDVIASFPTNPGASGGKDRHSNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GEGVKGKEGLVSSARADGAGRNARARDFPDRGGGEHGDREKGRGRKATGGKEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGASGYTGSGVSGGXXXXXXXXXXXXTPGRVVVDKDDHLGMNVNMSEFDTAEFEVVKSRREVQKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQIKAQLELNKAETXXXXXXXXXXXXXXXXXXXXXXXXXXI-----ASMSEQVRRSDQEASSREKANASTHGPPAQAATTGSAPVASVKKQDNGKSPEVTTAVAAAAAAQPSAPASSVPSRAGHSNARPDGASPAEPASSPKMTQSSKPAVVLPPLSPAKTTRPLSPAIQFGSVGADDDAGWSATPKNKGKALVDSAGACAESGGRVADGERSGPRAFGPETTPEVCAPSRNGEAGPSSSASKSRHDAPRPNVPRPSDKSPPLGEGALPEVGVVEPTREVGLNPPSKQQQPASNLSGKNDKQGERNGK 2129
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Match: A0A8J2S6H3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6H3_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.680e-11 Identity = 49/92 (53.26%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 176 KKSFASKNLNALTKAPAVQSRGSDRAGEVVRP--AYGAGGRLLVLGSKNRD--AGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGVGW 439
+KSFAS+NLN+ T+ P E RP AYG GGRLLVLG + A ++ PVP+NTPSLRRE+ GQD+SV LVPSGG GW
Sbjct: 8 RKSFASRNLNSATRKP-----------EQARPQRAYGGGGRLLVLGKRPEPTAASKTNTVAAPVPMNTPSLRRESGGQDVSVKLVPSGGGGW 88
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Match: A0A7S3NKR7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKR7_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 9.110e-10 Identity = 54/107 (50.47%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 176 KKSFASKNLNALTKAPAVQSRGSDRAGEVVRPA--YGAGGRLLVLGSKNRDAGGAGGLSTPVPVNTPSLRRENKGQDISVPLVPSGGVGWGAGKVTAPAPAVAEPAP 490
+K+F S+NLNALT+AP +VVR YG+GGRLLVLG K + + P P+NTPSLRREN+GQD+SV LVP GG W A T P P E AP
Sbjct: 20 RKNFTSRNLNALTRAPKE---------DVVRREGRYGSGGRLLVLG-KAQGEKSTPSVVAPTPLNTPSLRRENRGQDLSVKLVPGGG-SW-ASPQTPPKPLEEEKAP 114
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Match: A0A8K1C7M8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7M8_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 1.110e-7 Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 170 TTKKSFASKNLNALTKAPAVQSRGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGLS------TPVPVNTPSLRRENKGQDISVPLVPSGGVGWG 442
++K F+S+NLNA+ KAP S+ S+ AG + + R+LVL R GA G++ P P+NTPSLR+EN GQDI V LVPSG GWG
Sbjct: 73 SSKTKFSSRNLNAVYKAPV--SKSSESAG------FPSANRMLVL----RPVRGAVGVAKANTVAAPTPINTPSLRKENMGQDIHVNLVPSGRNGWG 157
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Match: A0A7S2SR64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR64_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.280e-6 Identity = 51/109 (46.79%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 176 KKSFASKNLNALTKAPAVQSRGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGL--STPVPVNTPSLRRENKGQDISVPLVPSGGVGWGAGKVTAPAPAVAEPAPAG 496
KK+F S NLNALTKA A + YGA RLLVLG + L S P+P+NTPSLR+E+ GQD +V LVPSGG G A A A PAP G
Sbjct: 57 KKTFGS-NLNALTKASATNAP---------TQRYGAN-RLLVLGKGGKSGASKASLVPSAPIPLNTPSLRKESGGQDTTVQLVPSGGGGTWGKSADAAAAAAEGPAPGG 154
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Match: A0A7R9Y8X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8X9_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.740e-5 Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 179 KSFASKNLNALTKAPA--VQSRGSDRAGEVVRPAYGAGGRLLVLGSKNRDAGGAGGLST-PVPVNTPSLRRENKGQDISVPLVPSGGVGWG 442
+ F NLN++ + P ++R S GGRL VLGS GG+S PVP+NTPSL++EN+GQD V LVPSGG GWG
Sbjct: 70 QKFKKSNLNSVVQGPPRHAETRVS-------------GGRLQVLGS--------GGISRGPVPLNTPSLKKENRGQDAFVSLVPSGGGGWG 139 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1016.163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1016.163.1 >prot_E-siliculosus-1a_F_contig1016.163.1 ID=prot_E-siliculosus-1a_F_contig1016.163.1|Name=mRNA_E-siliculosus-1a_F_contig1016.163.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=2849bp MPTSPGDGVVNTTTGAPGPSPSDTSSSPAASGSSGTGTTTKKSFASKNLNback to top mRNA from alignment at E-siliculosus-1a_F_contig1016:11105..29799- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1016.163.1 ID=mRNA_E-siliculosus-1a_F_contig1016.163.1|Name=mRNA_E-siliculosus-1a_F_contig1016.163.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=18695bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1016:11105..29799- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1016:11105..29799- >mRNA_E-siliculosus-1a_F_contig1016.163.1 ID=mRNA_E-siliculosus-1a_F_contig1016.163.1|Name=mRNA_E-siliculosus-1a_F_contig1016.163.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=17094bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1016:11105..29799- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |