mRNA_E-siliculosus-1a_F_contig1262.1621.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: D7FXS5_ECTSI (Mg2+ transporter-e family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS5_ECTSI) HSP 1 Score: 544 bits (1401), Expect = 9.750e-188 Identity = 304/320 (95.00%), Postives = 304/320 (95.00%), Query Frame = 2
Query: 857 MATSTGGSGADSSFPSRGRGGTKRPAGEESPAARPAERHSACESTASAISADELASPPPPGQAAVTMEDPNSGSTTAVGEGIDATPGLPAAPAQPRKEVLANKSTALMQEQDGQGGSNLETSGEGGGDFAEEDFDGPIAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQVLTLPL 1816
MATSTGGSGADSSFP RGR GTKRPAGEESPAARPAERHSACESTASAIS DELASPPP QAAV MEDPNS STTAVGEGID TPGLPA P QPRKEVLANKSTALM EQDGQ G LETSGEGGGDFAEEDFDGPIAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACAL VIGDQAIVG LLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQVLTLPL
Sbjct: 1 MATSTGGSGADSSFP-RGRRGTKRPAGEESPAARPAERHSACESTASAISTDELASPPPD-QAAVAMEDPNSRSTTAVGEGIDVTPGLPAPPGQPRKEVLANKSTALMPEQDGQTGFKLETSGEGGGDFAEEDFDGPIAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALSVIGDQAIVGILLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQVLTLPL 318
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A6H5JCN2_9PHAE (MgtE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCN2_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 1.440e-132 Identity = 223/248 (89.92%), Postives = 225/248 (90.73%), Query Frame = 2
Query: 857 MATSTGGSGADSSFPSRGRGGTKRPAGEESPAARPAERHSACESTASAISADELASPPPPGQAAVTMEDPNSGSTTAVGEGIDATPGLPAAPAQPRKEVLANKSTALMQEQDGQGGSNLETSGEGGGDFAEEDFDGPIAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLR 1600
MATSTGGS AD+SFPSRGRG TKR EESPAARPAERH ACESTASAIS DELASPPP QAA ME+P S STTAVGE D TP LPAAPAQPRKEVLANKSTALM EQDG G LETSGEGGGDFAEEDFDGPIAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVG LLGTALAAGGFVRVWVTEGTTLR
Sbjct: 1 MATSTGGSSADNSFPSRGRGDTKRLPKEESPAARPAERHRACESTASAISTDELASPPPE-QAAAAMENPKSRSTTAVGEDRDMTPSLPAAPAQPRKEVLANKSTALMPEQDGHTGFKLETSGEGGGDFAEEDFDGPIAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGILLGTALAAGGFVRVWVTEGTTLR 247
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A150GIY2_GONPE (MgtE domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GIY2_GONPE) HSP 1 Score: 225 bits (574), Expect = 1.400e-65 Identity = 123/168 (73.21%), Postives = 142/168 (84.52%), Query Frame = 2
Query: 1289 GRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQL 1792
GRWLLGLL++QS+SSFVLD YQ+LLR+H+VVTLFLTMLVGAGGNAGNQSAIKVIRGLATG P A + +QA+VG LLGT L+AGGFVRV+ T G L +A+AIS SLFLIVM SV+LG+ LPF ARAGVDPANAGT+IQV MDI+GVA+TCVTC+LVL QL
Sbjct: 43 GRWLLGLLIVQSTSSFVLDAYQELLRDHLVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGAIRPSWPSARATMREQALVGLLLGTGLSAGGFVRVYATHGD-LTNAAAISVSLFLIVMTSVVLGTGLPFALARAGVDPANAGTSIQVLMDILGVAITCVTCNLVLVQL 209
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A250XGX6_9CHLO (MgtE domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XGX6_9CHLO) HSP 1 Score: 226 bits (576), Expect = 6.580e-65 Identity = 119/180 (66.11%), Postives = 143/180 (79.44%), Query Frame = 2
Query: 1265 PIAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQVL 1804
PIAE+++RGRWL+GLL+ QS+SSFVLD YQDLLR+H+VVTLFLTMLVGAGGNAGNQSAIKVIR LATG P + +QA VG LLG L+ GGF+RV++T G LR++ +IS SLFLIVM SV+LG+ LPF A+ GVDPANAGTTIQV MDI+GV +TCVTC ++L QL L
Sbjct: 111 PIAEAWSRGRWLMGLLIFQSTSSFVLDRYQDLLRDHLVVTLFLTMLVGAGGNAGNQSAIKVIRALATGSVRPSWQSIKNTMAEQAAVGLLLGGGLSVGGFIRVYLTNGD-LRNSFSISLSLFLIVMTSVILGTGLPFALAKTGVDPANAGTTIQVVMDILGVVITCVTCDIILNQLQSAL 289
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A836BXZ3_9CHLO (MgtE domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BXZ3_9CHLO) HSP 1 Score: 228 bits (580), Expect = 5.760e-64 Identity = 126/180 (70.00%), Postives = 145/180 (80.56%), Query Frame = 2
Query: 1268 IAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQVLT 1807
+ E+ +RGRWLLGLL++QS+SSFVLD YQDLLR+H+VVTLFLTMLVGAGGNAGNQSAIKVIRGLATG P + DQ++VG LLG+ LA GGFVRV+ T G +A+AIS SLFLIVM SV+LGS LPF ARAGVDPANAGT+IQV MDI+GVAVTCVTC+ VL QL LT
Sbjct: 231 VDEALSRGRWLLGLLIVQSTSSFVLDAYQDLLRDHLVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGAIRPSWPSCRATLRDQSLVGLLLGSGLAVGGFVRVYATHGDV-ANAAAISVSLFLIVMISVVLGSGLPFVLARAGVDPANAGTSIQVLMDILGVAVTCVTCNFVLVQLAAGLT 409
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A8J4CLL9_9CHLO (MgtE domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CLL9_9CHLO) HSP 1 Score: 228 bits (582), Expect = 5.770e-64 Identity = 125/175 (71.43%), Postives = 142/175 (81.14%), Query Frame = 2
Query: 1268 IAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQL 1792
I E+ RGRWLLGLL++QS+SSFVLD YQDLLR+H+VVTLFLTMLVGAGGNAGNQSAIKVIRGLATG P A + DQA+VG LLGT L+ GGFVRV+ T G +A+AIS SLFLIVM SV+LG+ LPF ARAGVDPANAGT+IQV MDI+GVA+TCVTC VL QL
Sbjct: 246 IDEALTRGRWLLGLLIVQSTSSFVLDAYQDLLRDHLVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGAIRPSWPSARATMRDQALVGLLLGTGLSVGGFVRVYATHGDV-ANAAAISISLFLIVMTSVVLGTGLPFALARAGVDPANAGTSIQVLMDILGVAITCVTCHFVLVQL 419
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: E1Z5J3_CHLVA (MgtE domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5J3_CHLVA) HSP 1 Score: 222 bits (566), Expect = 1.680e-63 Identity = 122/176 (69.32%), Postives = 141/176 (80.11%), Query Frame = 2
Query: 1271 AESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQ 1798
AE+++RGRWLLGLLVLQS SSFVLD YQDLL+EH+VVTLFLTMLVGAGGNAGNQSAIK+IRGLATG P AA R + Q VG +LG LAAGG+VRV++T G L +A+AIS SLFLIV+ SVL G+ LPF ARAGVDPANAGT+IQV MD+ GV +TC C +VL QL Q
Sbjct: 106 AEAWSRGRWLLGLLVLQSMSSFVLDSYQDLLKEHLVVTLFLTMLVGAGGNAGNQSAIKIIRGLATGSLKPTAAGIRRAMQQQLAVGLMLGLGLAAGGWVRVYITNGDPL-NATAISISLFLIVLCSVLAGTGLPFALARAGVDPANAGTSIQVVMDVSGVFITCAVCHVVLDQLAQ 280
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A2P6VBX1_9CHLO (Magnesium transporter n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VBX1_9CHLO) HSP 1 Score: 221 bits (563), Expect = 8.880e-63 Identity = 120/175 (68.57%), Postives = 142/175 (81.14%), Query Frame = 2
Query: 1274 ESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQ 1798
E+++RGRWLLGLLVLQS+SSFVLD YQ+LL+EH+VVTLFLTMLVGAGGNAGNQSAIKVIRGLATG P A R + Q VG +LGT LAAGG++RV++T G L +A+AIS SLFLIV+ SV+ G+ LPF ARAG+DPANAGT+IQV MD+ GV +TC TC LVL QL Q
Sbjct: 129 EAWSRGRWLLGLLVLQSTSSFVLDSYQELLKEHLVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGAMKPTGAGMGRAMKQQLAVGLMLGTGLAAGGWLRVYITNGDVL-NATAISISLFLIVVCSVVAGTGLPFALARAGIDPANAGTSIQVVMDVTGVLLTCATCHLVLDQLAQ 302
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A835SIG2_CHLIN (MgtE domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SIG2_CHLIN) HSP 1 Score: 226 bits (575), Expect = 1.490e-62 Identity = 121/177 (68.36%), Postives = 144/177 (81.36%), Query Frame = 2
Query: 1268 IAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQ 1798
+ E+ +RGRWLLGLL++QS+SSFVLD YQDLLR+H+VVTLFLTMLVGAGGNAGNQSAIKVIRGLATG P A + +QA+VG +LGT L+AGGF+RV+ T G +A AIS SLF+IVM SV+LG+ LPF ARAGVDPANAGT+IQV MDI+GVA+TCVTC+ VL QL
Sbjct: 275 VEEALSRGRWLLGLLIVQSTSSFVLDAYQDLLRDHLVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGVIRPSWPSARATLREQALVGVMLGTGLSAGGFLRVYATHGDV-TNAVAISISLFMIVMTSVVLGTGLPFALARAGVDPANAGTSIQVLMDILGVAITCVTCNFVLVQLSS 450
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Match: A0A8J9SFX2_9CHLO (Probable magnesium transporter MgtE n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SFX2_9CHLO) HSP 1 Score: 218 bits (555), Expect = 3.020e-62 Identity = 120/181 (66.30%), Postives = 141/181 (77.90%), Query Frame = 2
Query: 1268 IAESYARGRWLLGLLVLQSSSSFVLDHYQDLLREHVVVTLFLTMLVGAGGNAGNQSAIKVIRGLATGRFTPHAACALRVIGDQAIVGFLLGTALAAGGFVRVWVTEGTTLRDASAISSSLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQVAMDIVGVAVTCVTCSLVLTQLDQVLTL 1810
++E+++RGRWLLGLLVLQS+SS VLD YQDLLR H+V+TLFLTMLVGAGGNAGNQSAIKVIRGLATGR AA + +G Q++VG LL L GF RV+V+EG+ L D+ AIS+SLF IVM SVL G+ LPFG A GVDPANAGTTIQV DI G +TCVTC L+L QL +L L
Sbjct: 80 VSEAWSRGRWLLGLLVLQSTSSMVLDLYQDLLRNHLVITLFLTMLVGAGGNAGNQSAIKVIRGLATGRMKLTAASLKQTLGQQSLVGLLLAVGLTGAGFARVYVSEGSLL-DSCAISASLFCIVMTSVLTGTVLPFGLAFMGVDPANAGTTIQVWCDITGCLITCVTCKLILDQLAHMLPL 259 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1262.1621.1 >prot_E-siliculosus-1a_F_contig1262.1621.1 ID=prot_E-siliculosus-1a_F_contig1262.1621.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1621.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=606bp MKAGCVPALASCTGLLPLAYCITALATDALSFQLAPGIGTRRCRRQPKVSback to top mRNA from alignment at E-siliculosus-1a_F_contig1262:28516..34755+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1262.1621.1 ID=mRNA_E-siliculosus-1a_F_contig1262.1621.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1621.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6240bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1262:28516..34755+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1262:28516..34755+ >mRNA_E-siliculosus-1a_F_contig1262.1621.1 ID=mRNA_E-siliculosus-1a_F_contig1262.1621.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1621.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3636bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1262:28516..34755+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |