mRNA_E-siliculosus-1a_F_contig10158.161.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A6H5JXQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ5_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 4.390e-79
Identity = 144/156 (92.31%), Postives = 144/156 (92.31%), Query Frame = 1

Query:    4 NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXXGGPAVKEEAGESGTGGAAXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            NQAELTEEEDSSLFFVQLPTKLPRPLAA QRGKDGASAPVRGKGK     GGPAVKEEAGESG G   XXXXXXXX  AAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV
Sbjct:  245 NQAELTEEEDSSLFFVQLPTKLPRPLAAFQRGKDGASAPVRGKGKGKAT-GGPAVKEEAGESGAGXXXXXXXXXXXKGAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 399

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: D8LHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB7_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.520e-76
Identity = 147/157 (93.63%), Postives = 148/157 (94.27%), Query Frame = 1

Query:    4 NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXX-GGPAVKEEAGESGTGGAAXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXX  GGPAVKEEAGESG G   XXXXXXXXXX  AEKASEI ADDVAFD+GLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV
Sbjct:  308 NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXATGGPAVKEEAGESGAGXXXXXXXXXXXXXXXAEKASEIAADDVAFDRGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 464

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A835ZEC9_9STRA (RNA polymerase III RPC4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.430e-12
Identity = 55/154 (35.71%), Postives = 71/154 (46.10%), Query Frame = 1

Query:   10 AELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXXGGPAVKEEAGESGTGGAAXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            A L  EED  +FFVQLPT LPR         +  S P  G G       G          GT              AAA+ + E       +D  L  M PG+IGKL + +SG  +L++ GV+L V  G+P  FVE+   ++ KQKT   FGQV
Sbjct:  290 AALQAEEDEGIFFVQLPTALPRVFPESM---EHPSQPTDGGGD------GXXXXXHGAVGGT--------RAQGAKAAADTSGEADGSP-GYDNSLTTMLPGRIGKLQIRRSGTVQLLLAGVALDVSAGMPCHFVEELTCVNPKQKTMSMFGQV 425

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A7S3UWU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWU6_HETAK)

HSP 1 Score: 67.0 bits (162), Expect = 1.470e-11
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1

Query:  271 DDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            +D   D GLRR+ PG++G++ VH SG+ +L +G     V PGLP  FV+  V++DA+  T C FGQ+
Sbjct:    5 EDPVADGGLRRVAPGRVGRVRVHASGRVKLTLGDTVFDVAPGLPCHFVQDVVAVDAEGGTACFFGQL 71

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A6G0WW31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW31_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.680e-7
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 1

Query:  253 ASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            A+E   DD+ FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P +F E+ VSID K++     G V
Sbjct:  244 ATERSQDDL-FDKSLHAMPGGFMGKINIHKSGKAVLVLGDKTFNIAPGHPPTFYEEAVSIDTKEELLSMLGPV 315

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: W4GQG3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQG3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.750e-7
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1

Query:  244 AEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            A K+SE    +  FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P SF E+ VSID K K     G V
Sbjct:  252 ASKSSEN-GTETRFDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPV 326

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A6A5AC38_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AC38_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.590e-7
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 1

Query:  274 DVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            +  FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P SF E+ VSID K K     G V
Sbjct:  266 ETRFDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPV 331

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A7S3VAP1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.760e-6
Identity = 29/84 (34.52%), Postives = 44/84 (52.38%), Query Frame = 1

Query:  241 AAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGG-------VSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            AA   S        +D  L+    GK GK+ +H+SGKA LV+GG       V +++  GLP  F++Q V+ID    ++   G+V
Sbjct:  420 AAAPTSSTNTSGAGYDDTLKDSAAGKYGKIVIHKSGKAYLVVGGADSKTPQVKMMLTEGLPCGFLQQAVAIDPNNASYVPLGEV 503

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A024TER0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TER0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.040e-6
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 1

Query:  250 KASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 471
            KA    ADD+ FD+ L  M  G +GK+ +H+SGKA LV+G  +  +  G P +  E+ VSID K K F   G +
Sbjct:  252 KAPNHGADDL-FDKSLLSMPGGYLGKINIHKSGKAVLVLGDKTFELAAGQPPACYEEVVSIDVKDKLFSMLGPI 324

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BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: T1HGK6_RHOPR (Uncharacterized protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HGK6_RHOPR)

HSP 1 Score: 52.0 bits (123), Expect = 8.710e-6
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1

Query:  295 LRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQ--GVSIDAKQKT 450
            LR + PG+IGKL + +SGKARL++G V L V PG   +F +    V++D  QKT
Sbjct:   26 LRNLPPGRIGKLQILKSGKARLILGDVKLWVEPGTQTAFKQDLISVNLDPNQKT 79

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 14

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5JXQ5_9PHAE	4.390e-79	92.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LHB7_ECTSI	1.520e-76	93.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZEC9_9STRA	1.430e-12	35.71	RNA polymerase III RPC4-domain-containing protein ...	[more]
A0A7S3UWU6_HETAK	1.470e-11	44.78	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A6G0WW31_9STRA	2.680e-7	42.47	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
W4GQG3_9STRA	3.750e-7	43.42	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A6A5AC38_9STRA	9.590e-7	43.94	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A7S3VAP1_9STRA	3.760e-6	34.52	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A024TER0_9STRA	6.040e-6	41.89	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
T1HGK6_RHOPR	8.710e-6	48.15	Uncharacterized protein n=1 Tax=Rhodnius prolixus ...	[more]

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Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig10158.161.1	prot_E-siliculosus-1a_F_contig10158.161.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig10158 747..2526 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927517.726828-CDS-E-siliculosus-1a_F_contig10158:746..897	1622927517.726828-CDS-E-siliculosus-1a_F_contig10158:746..897	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10158 747..897 +
1696318564.2715278-CDS-E-siliculosus-1a_F_contig10158:746..897	1696318564.2715278-CDS-E-siliculosus-1a_F_contig10158:746..897	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10158 747..897 +
1622927517.7387178-CDS-E-siliculosus-1a_F_contig10158:1397..1573	1622927517.7387178-CDS-E-siliculosus-1a_F_contig10158:1397..1573	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10158 1398..1573 +
1696318564.284613-CDS-E-siliculosus-1a_F_contig10158:1397..1573	1696318564.284613-CDS-E-siliculosus-1a_F_contig10158:1397..1573	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10158 1398..1573 +
1622927517.751611-CDS-E-siliculosus-1a_F_contig10158:2382..2526	1622927517.751611-CDS-E-siliculosus-1a_F_contig10158:2382..2526	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10158 2383..2526 +
1696318564.2918236-CDS-E-siliculosus-1a_F_contig10158:2382..2526	1696318564.2918236-CDS-E-siliculosus-1a_F_contig10158:2382..2526	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10158 2383..2526 +