mRNA_E-siliculosus-1a_F_contig126.1609.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig126.1609.1
Unique NamemRNA_E-siliculosus-1a_F_contig126.1609.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: D8LBT3_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT3_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 2.320e-92
Identity = 147/184 (79.89%), Postives = 148/184 (80.43%), Query Frame = 1
Query:   28 MRSQARLSALLLWVRPPFVPPSTKAGRWVHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVR 579
            MR QARLSALL  VRPPFVPPSTKAGRWVHT AV GFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTR ILPFALSEG                             GEAIPIPDSSARALVA QSFHWMSSAATLREVHRVLVPGGLFVL+WNTRDCTRPWVR
Sbjct:    1 MRGQARLSALLSRVRPPFVPPSTKAGRWVHTEAVGGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTRNILPFALSEG----------------------------AGEAIPIPDSSARALVAPQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 156          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A3P4AWJ1_9BURK (Putative methyltransferase YcgJ n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4AWJ1_9BURK)

HSP 1 Score: 164 bits (415), Expect = 2.080e-45
Identity = 111/280 (39.64%), Postives = 148/280 (52.86%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLF--YDTEVF 942
            +H  A DG+    A  Y   RP YP      I+  +R +    +G  +VDLGAGTGKFT    P   + G +++ VEPV +M D+  AA+PGVR + G  EAIP+PD+SA A+V AQ+FHW + AA L E+HRVL PGG   LVWN RD   PWV  L+ I++  Y +D PR   G WR +F           P  G      FG L E+H+ +      E  +   +RS S IA  PERER     + + L+   P+      L GR ++   YDT  F
Sbjct:    7 IHHAAADGYT-QQADAYVRGRPDYPTQ----IDGWLRDAVGLRAGTTVVDLGAGTGKFT----PRLAATGATVIAVEPVPSMLDKLTAALPGVRALTGTAEAIPLPDASADAVVCAQAFHWFAHAAALDEIHRVLKPGGRLALVWNMRDARVPWVARLDAIVNA-YENDAPRFYTGAWRAAF-----------PHAG------FGPLDERHYPNRHAGPPEHVILDRVRSTSFIAALPERERTQVDTQLRALIDAEPE------LHGRPEVAVPYDTAAF 253          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A3G8GE75_9BURK (Class I SAM-dependent methyltransferase n=7 Tax=Burkholderiales TaxID=80840 RepID=A0A3G8GE75_9BURK)

HSP 1 Score: 164 bits (414), Expect = 3.100e-45
Identity = 110/283 (38.87%), Postives = 150/283 (53.00%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNKT 957
            +H  A DG+    A  Y   RP YP      +   +   GL  +G  ++DLGAGTGKFT    P  L+ G S++ VEPV AM D+  AA PGVR + G  +AIP+PD+S   +V AQ+FHW ++A  L E+HRVL PGG   LVWN RD   PWV A++ I++ F GD  PR   G WRQ+F           P  G      FG + E+H+ +    + E+ +   +RS S I+  P  +RA    R Q L++  P+    LR    V L YDT  +   +T
Sbjct:    7 IHHSAADGYT-KGADTYVRGRPDYPPEIAWWLRDTL---GLH-AGATVLDLGAGTGKFT----PRLLATGASVIAVEPVAAMLDKLAAAHPGVRPLVGTADAIPLPDASVDVVVCAQAFHWFATAEALDEIHRVLKPGGRLGLVWNMRDANVPWVAAIDRIVNEFEGD-APRYYTGAWRQAF-----------PHPG------FGPMDERHYANGHTGSPEDVILNRVRSTSFISALPPEQRAGVDQRLQALIQAEPE----LRGHAAVTLPYDTAAYCLART 258          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A7U9Q2G0_PSEFL (Methyltransf_11 domain-containing protein n=23 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A7U9Q2G0_PSEFL)

HSP 1 Score: 163 bits (412), Expect = 5.660e-45
Identity = 109/282 (38.65%), Postives = 145/282 (51.42%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
            +H  A DG+    A  Y   RP YP     A+E  +R +   G G ++VDLGAGTGKFT  +L    + G  ++ VEPV+ MR +  AA P  +V+EG  EA+P+ D+S   LV AQ+FHW +  A L E+HRVL PGG   LVWN RD   PWV  L+ I++    D  PR   G WRQ+F           P  G      FG L EQHF      T E+ +   +RS S IA  P+ ER     +   L+ + P     LR   +V + Y T  F+C +
Sbjct:    6 IHHAAADGYQ-QAADTYVRGRPDYPP----ALEPWLRETLGLGPGRVVVDLGAGTGKFTGRLL----ATGAQVIAVEPVEQMRARLAAAQPEAQVLEGSAEALPLKDASVDVLVCAQAFHWFAHRAALEEIHRVLKPGGKLALVWNLRDARVPWVARLDAIVNALQAD-TPRYYTGAWRQAF-----------PHPG------FGPLQEQHFTQGHSGTPEDVIFNRVRSTSFIAALPQAEREAVDRQIVALIDSEPQ----LRGKAQVTVPYTTAAFYCTR 256          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A2S5KHR5_9PROT (SAM-dependent methyltransferase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2S5KHR5_9PROT)

HSP 1 Score: 163 bits (412), Expect = 6.150e-45
Identity = 111/284 (39.08%), Postives = 154/284 (54.23%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRP--ERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
            VH  A  G+   +A+ Y   RP YPA     + A +   GL G    +VDLGAGTGKFTR ++    + G  ++ VEPV AMR + + A+P V+ +EG   AIP+PD+S   LV AQSFHW ++ ATL EV RVL PGG F L+WN RD    WV A+ +II P+ GD  PR   G WRQ  ++                +  F  L +Q + H+ L + EE +     S+S IA  P  E+++ +A LR   L+  +P  R+   L+      Y+TE +WC K
Sbjct:    4 VHDAAQSGYSQASAT-YRRGRPEYPAEVDSWLTATL---GL-GPSATVVDLGAGTGKFTRRLV----ATGAEVIAVEPVAAMRAELQQALPQVQALEGNAAAIPLPDASVDVLVCAQSFHWFATEATLAEVARVLKPGGRFALIWNVRDERVDWVAAITEIITPYEGD-APRFYKGDWRQPLQSA-------------LFQQTFTPLQQQLWPHAHLGSSEEVIIARSLSVSFIAALPQTEQDKVEAALRG--LISRYPQLRDQQELA----FPYNTEAYWCQK 258          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A7V7E654_9PROT (Class I SAM-dependent methyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7E654_9PROT)

HSP 1 Score: 162 bits (411), Expect = 7.540e-45
Identity = 117/285 (41.05%), Postives = 146/285 (51.23%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAE-IRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLF--YDTEVFWCNK 954
            VH  A  GF    A  Y   RP YPA    A++   I + GL+ SG  +VDLGAGTGKFTR +L    + G  +  VEPV AMR QF    PG  V++G  EAIP+PD SA ALV AQSFHW ++   L E+ RVL PGG+  LVWN RD T  WV ++  II PF G   PR   G WRQ F           P  G      FG+L +  F H     +E+ L   + S+S IA  PE          +    THPD      L+G+ ++   Y TE F C +
Sbjct:    4 VHEAASVGFS-IQAEAYRRGRPDYPA----AVDGWLIGQLGLS-SGRSVVDLGAGTGKFTRRLL----ATGARVTAVEPVAAMRAQFVLTAPGTLVLDGTAEAIPLPDGSADALVCAQSFHWFANLVALSEIRRVLKPGGVLGLVWNVRDETVDWVASVGRIIQPFEGS-TPRYHKGDWRQLF-----------PAEG------FGQLEQTVFPHGHQGAVEQVLIDRILSVSFIAALPESMHNLVAAELRHFAATHPD------LAGQKEIIFPYRTEAFCCRR 254          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A8J6VPN7_9CYAN (Methyltransferase domain-containing protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6VPN7_9CYAN)

HSP 1 Score: 162 bits (410), Expect = 1.150e-44
Identity = 102/281 (36.30%), Postives = 142/281 (50.53%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
            VH  A  GF    A  YE  RPGYPA A+  ++  +  S  T     +VDL AGTGKFTR++       G  +V +EPV+ MR +FEA +P + V+ G  E+IP+  +S   +  AQ+FHW    A L E+HRVL PGG   L+WN RD +  WV  +  II P  GD  PR + GQWR +F   +                 F  L  Q F ++    L+     + SIS IA    + +   L + + L++ HP TR+       ++  Y TEVFWC +
Sbjct:    7 VHAAARQGFQ-IGADAYERGRPGYPAAAIEFLQQTLNLSSAT----TVVDLAAGTGKFTRQLQDL----GCQVVAIEPVEGMRQKFEALLPNIPVLNGTAESIPLAAASTDVVTVAQAFHWFQGEAALAEIHRVLKPGGYLGLIWNVRDESFDWVAQISAIITPHEGD-APRYRTGQWRTAFEQTD----------------LFTPLETQIFSYAHQYDLDAAIDRVASISFIAALNAQTQQTVLRQVRELLEHHPQTRD----RPIIEHPYRTEVFWCTR 257          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A126S4J6_PSEPU (Methyltransferase n=17 Tax=Pseudomonas TaxID=286 RepID=A0A126S4J6_PSEPU)

HSP 1 Score: 162 bits (409), Expect = 1.490e-44
Identity = 109/281 (38.79%), Postives = 146/281 (51.96%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
            VHT A  GF    +S YE  RP YP     A++  +R +    +G  ++DLGAGTGKFTR +   A      L  VEPV AMR++F   +P V V+EG  + IP+ D+S + LV AQ+FHW + AA LRE+HRVL PGG   L+WN RD T  WV  + +II P+ GD  PR   G+WR +F     S                  L   H  + + + LE L    RS+S IA  P+ E+   + R Q LV  HP     L+   RV   Y T+ + C +
Sbjct:    4 VHTSASTGFS-RQSSNYEQGRPDYPV----ALQGWLRDTLGIDAGTPVLDLGAGTGKFTRLLTALAPR----LTAVEPVAAMRERFHERLPEVPVLEGTAQHIPLADASQQVLVCAQAFHWFADAAALREMHRVLAPGGRLGLIWNVRDETVDWVARITEIITPYEGD-TPRFHTGRWRDAFAGSRFSAPQLTT------------LPHVHEGNPQTVILERL----RSVSFIAALPQAEQDRVMARLQDLVDNHP----ALKGRERVAFPYQTQAYVCQR 254          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: UPI001F0B79BD (class I SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. LAM7114 TaxID=2487275 RepID=UPI001F0B79BD)

HSP 1 Score: 160 bits (404), Expect = 8.050e-44
Identity = 103/265 (38.87%), Postives = 141/265 (53.21%), Query Frame = 1
Query:  151 ASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFW 945
            A  YE +RP YP  AL    AE+  +    +G  +VDLGAGTGKFTR +   AL+ G  +V VEPV  MR++    +PGV V  G  EA  +PD+SA A+VAAQS+HW   A  L EV R+L PGG   LVWNT D + PWVR  +DII  F   D+P    G WR++F                  R  +G ++E+H+ +    T+ ++   M S S +A     E+         ++ +H  TR      GR+DL Y T+V+W
Sbjct:   15 AGVYERSRPSYPMAAL----AELADALPLEAGRRVVDLGAGTGKFTRLL---ALT-GAEVVAVEPVAEMRERLAELLPGVNVTAGTAEATGLPDASADAVVAAQSWHWFQEADALAEVERLLRPGGALALVWNTYDTSVPWVRDFQDIIFRFAPRDLPSPLDGGWRKAFAG----------------RDGWGAISERHWPNPHSTTVTDVVERMMSSSHVAVMSPAEQEGVRAEVLSVLGSHDATRR----EGRIDLPYTTDVYW 251          
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: Q1I8Z5_PSEE4 (Methyltransf_11 domain-containing protein n=4 Tax=Pseudomonas entomophila TaxID=312306 RepID=Q1I8Z5_PSEE4)

HSP 1 Score: 160 bits (404), Expect = 8.270e-44
Identity = 107/281 (38.08%), Postives = 150/281 (53.38%), Query Frame = 1
Query:  112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
            VH  A  GF   + + YE  RP YP     A++  +R +   G+G  ++DLGAGTGKFTR + P A      L  VEPV AMR++F   +P V V+EG  + +P+ D+S + LV AQ+FHW + AA L E+HRVL PGG   LVWN RD +  WV  + +II P+ GD  PR   G+WR++F        D R  +  T       L   H    + + +E L    RS+S IA  P+ E+   + R Q L+  HPD    L+   R+   Y T+ + C +
Sbjct:    4 VHASASTGFTRQSGN-YEQGRPDYPI----ALQGWLRDTLGVGNGTTVLDLGAGTGKFTRLLTPLAPR----LTAVEPVAAMRERFHEQLPEVPVLEGTAQHMPVADASQQVLVCAQAFHWFADAAALAEMHRVLAPGGRLGLVWNVRDESVDWVARITEIITPYEGD-TPRFHTGRWREAF--------DGRWFSAPT----LTTLPHVHEGSPQTVIIERL----RSVSFIAALPQVEQDKVMARLQDLIDHHPD----LKGRERIAFPYQTQAYRCQR 254          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBT3_ECTSI2.320e-9279.89Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A3P4AWJ1_9BURK2.080e-4539.64Putative methyltransferase YcgJ n=1 Tax=Pigmentiph... [more]
A0A3G8GE75_9BURK3.100e-4538.87Class I SAM-dependent methyltransferase n=7 Tax=Bu... [more]
A0A7U9Q2G0_PSEFL5.660e-4538.65Methyltransf_11 domain-containing protein n=23 Tax... [more]
A0A2S5KHR5_9PROT6.150e-4539.08SAM-dependent methyltransferase n=2 Tax=Proteobact... [more]
A0A7V7E654_9PROT7.540e-4541.05Class I SAM-dependent methyltransferase n=1 Tax=Rh... [more]
A0A8J6VPN7_9CYAN1.150e-4436.30Methyltransferase domain-containing protein n=4 Ta... [more]
A0A126S4J6_PSEPU1.490e-4438.79Methyltransferase n=17 Tax=Pseudomonas TaxID=286 R... [more]
UPI001F0B79BD8.050e-4438.87class I SAM-dependent methyltransferase n=1 Tax=St... [more]
Q1I8Z5_PSEE48.270e-4438.08Methyltransf_11 domain-containing protein n=4 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig126contigE-siliculosus-1a_F_contig126:78470..83026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size945
Model size972
Exons7
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko00001,ko00002,ko02000,ko03019,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.Q
Ec32 orthologEc-27_002790.1
Ec32 ortholog descriptionMethyltransferase type 11
EggNOG OGsCOG0500@1,KOG3010@2759
EggNOG free text desc.trans-aconitate 3-methyltransferase activity
GOsGO:0003674,GO:0003824,GO:0005975,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009636,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042221,GO:0044237,GO:0044238,GO:0044262,GO:0046547,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:1990748
KEGG ModuleM00427
KEGG Pathwayko03013,ko04973,map03013,map04973
KEGG TC1.I.1,2.A.1.1.13
KEGG koko:K08143,ko:K14300
Seed eggNOG ortholog2880.D8LBT3
Seed ortholog evalue6e-73
Seed ortholog score281.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig126.1609.1prot_E-siliculosus-1a_F_contig126.1609.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig126 78470..82999 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927782.3578978-CDS-E-siliculosus-1a_F_contig126:78469..786231622927782.3578978-CDS-E-siliculosus-1a_F_contig126:78469..78623Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 78470..78623 -
1696318677.9305212-CDS-E-siliculosus-1a_F_contig126:78469..786231696318677.9305212-CDS-E-siliculosus-1a_F_contig126:78469..78623Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 78470..78623 -
1622927782.3718526-CDS-E-siliculosus-1a_F_contig126:80636..807771622927782.3718526-CDS-E-siliculosus-1a_F_contig126:80636..80777Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 80637..80777 -
1696318677.9421632-CDS-E-siliculosus-1a_F_contig126:80636..807771696318677.9421632-CDS-E-siliculosus-1a_F_contig126:80636..80777Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 80637..80777 -
1622927782.3843992-CDS-E-siliculosus-1a_F_contig126:80968..810671622927782.3843992-CDS-E-siliculosus-1a_F_contig126:80968..81067Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 80969..81067 -
1696318677.950987-CDS-E-siliculosus-1a_F_contig126:80968..810671696318677.950987-CDS-E-siliculosus-1a_F_contig126:80968..81067Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 80969..81067 -
1622927782.3939645-CDS-E-siliculosus-1a_F_contig126:81378..815531622927782.3939645-CDS-E-siliculosus-1a_F_contig126:81378..81553Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 81379..81553 -
1696318677.960322-CDS-E-siliculosus-1a_F_contig126:81378..815531696318677.960322-CDS-E-siliculosus-1a_F_contig126:81378..81553Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 81379..81553 -
1622927782.403484-CDS-E-siliculosus-1a_F_contig126:81990..820741622927782.403484-CDS-E-siliculosus-1a_F_contig126:81990..82074Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 81991..82074 -
1696318677.9689944-CDS-E-siliculosus-1a_F_contig126:81990..820741696318677.9689944-CDS-E-siliculosus-1a_F_contig126:81990..82074Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 81991..82074 -
1622927782.4144373-CDS-E-siliculosus-1a_F_contig126:82495..826411622927782.4144373-CDS-E-siliculosus-1a_F_contig126:82495..82641Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 82496..82641 -
1696318677.977732-CDS-E-siliculosus-1a_F_contig126:82495..826411696318677.977732-CDS-E-siliculosus-1a_F_contig126:82495..82641Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 82496..82641 -
1622927782.42658-CDS-E-siliculosus-1a_F_contig126:82853..829991622927782.42658-CDS-E-siliculosus-1a_F_contig126:82853..82999Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 82854..82999 -
1696318677.9865503-CDS-E-siliculosus-1a_F_contig126:82853..829991696318677.9865503-CDS-E-siliculosus-1a_F_contig126:82853..82999Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig126 82854..82999 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927782.43752-UTR-E-siliculosus-1a_F_contig126:82999..830261622927782.43752-UTR-E-siliculosus-1a_F_contig126:82999..83026Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig126 83000..83026 -
1696318677.9952896-UTR-E-siliculosus-1a_F_contig126:82999..830261696318677.9952896-UTR-E-siliculosus-1a_F_contig126:82999..83026Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig126 83000..83026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig126.1609.1

>prot_E-siliculosus-1a_F_contig126.1609.1 ID=prot_E-siliculosus-1a_F_contig126.1609.1|Name=mRNA_E-siliculosus-1a_F_contig126.1609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=315bp
MRSQARLSALLLWVRPPFVPPSTKAGRWVHTGAVDGFGGNNASFYENTRP
GYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLS
LVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWM
SSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPR
QQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE
LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFY
DTEVFWCNKTSLCQ*
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mRNA from alignment at E-siliculosus-1a_F_contig126:78470..83026-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig126.1609.1 ID=mRNA_E-siliculosus-1a_F_contig126.1609.1|Name=mRNA_E-siliculosus-1a_F_contig126.1609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4557bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig126:78470..83026- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGGTGCTCGCGTAGCAACTGCAGCCACATGCGCAGTCAGGCAAGACTGTC GGCATTGCTATTGTGGGTGAGGCCGCCGTTCGTTCCACCATCCACGAAGG CAGGGAGATGGGTGCACACGGGAGCTGTGGACGGATTTGGGGGCAACAAC GCCTCCTTCTACGAGAACACGAGGTACCTCCGGGTGAAAATGTTGTGCAT GTATCTGGAGACAGTTTGCGGGCCCCTTTCATGAACGAAAGTCCGTTAGA TCTGCCGTCAGGCACTTGATGCGTCCGTGTGTTCTACGGCTGCTGAACAG AACTGCTGTACCGTCTAAGAGCGAACGCCTGATGCTTATTTTGACTGCCC GACTTCGGGCTCTTCTCTCGCCCTCTTGATGTAAGGCCGGGATATCCCGC TCACGCATTGAGAGCTATCGAGGCTGAGATTCGCCGAAGCGGCCTCACCG GTAGCGGGGAGCTCTTGGTGGATCTCGGCGCCGGTACAGGGAAATTCACG CGCGAGATCCTTCCGTTCGCTCTCTCGGAAGGTGCCGTCCGAGCTCCATG CTCCGCTCCCCTTGTGCTTGTAGAATGAAAGTTGTTGGGGAGTTGGTGTA ACTCGTGTCTTCCTGCGCGAACGCGCGGCCGGCATGTTCACCGAGTGCAA AAGGAGCCCCCAACTTTCATCCGATATGGCTAGAAGCTTGAACTTCGTCC AATGTGCCTCCGGCGATCCGAGATTCCTCTTTGGCTGTACCTGCACCAAT CCTTGACACGACGGTATCCCTCATCTCGCCTCTACGTAATACGACTGTAC CACTTGTTTCTATCCCCCCCCGCCCCCCGCACGTACTCGAACTGCTGGCT GCTTGACGGTCCTCGTTTTCCACTCCACGTCGTCGCCGTCGGTGGGGGGC GGGGGGGGGGTACTGTCCAACCTACCGTCTTGCTTCGATTGTGAGGGTTC AGGCCTGTCCTTGGTTGGGGTGGAGCCGGTAAAAGCCATGCGAGATCAGT TCGAGGCAGCTGTGCCTGGGGTTCGAGTCGTTGAAGGTGTGAGTTGAGGC GTGCCACCCCGCCCCCTGCTTGTCGCTCTTTGGCCGGTGTGACCCTCGGG AGTGGAGAATACAGCACGGAAAACGCTTATCGTTGTCCGAGGTTTCGACG TATCGTACGTGGAGCAGGCTATGATCCCCTGTAGAGCTGGACGATGAGTT TCGGGCAGAAGAACGCTTGGCTAGAATAGGAAGGCTTCGGATTCGGTGGC AGTCGAGTTGCGCAGGCGTTTTGGGCATGACGCGCCCGTCAACGCCCGCT AGTTCACCGCACATGAGTCCTACCCGTGAATTTGTCCTGCTCCCAAGTGG TGCGTCCGTTGTTCTTGGTGGCGAGCAAATGTTCCGCGCACGAGTCAACG GTCCCGACTGCCTTGCTTCAGTGTCGTTGCTCTGCGTACAAAGCCGCCCG GCCATTGATGCTGCTACGGACAGGTGTCGGAGAGGCCATTCCTATCCCGG ATTCCTCGGCCAGAGCGTTGGTCGCAGCCCAAAGCTTTCACTGGATGTCT TCGGCGGCTACCCTGCGAGAGGTACACAGGGTGCTCGTGCCGGGCGGGTT GTTTGTGCTTGTGTGGAACACCCGCGATTGCACAAGGCCATGGGTGCGGT GAGAATAAAACATCACCCTCGCTTTTTATTCCCAGTGGTGTAAGGTTGGT CCTGCTGTACAGCTTTGCGGTAGAGGCAACAAAGGAGTAGACAGGAGTGT TGATCATCGCCAGGCTCCACTTCAACTCCAGTCTCAACTACCCGTAACAT ACGCTCTGGTCCATGCCCAACGGCGAACTGTGACGCGGAACAACCGGGTG AGTGAGGGCTGTCGAGCCCCTTGATGGAGCTTTTAGTCGTGGCTTGATGG CGCTTGGGTTTCTCCTTGCTGCTGATTGTTCACCCTTCTAACTAACTTTC GCGTTGCAGCGCACTCGAAGACATAATCGACCCCTTCTACGGCGACGATG TGCCACGGCAACAAGGTGGACAGTGGAGGCAATCCTTCCGAGCCCTCGAG CAGTCAAGGTAACTGCGTAATGAAGAGGCCCATCCCACGTTAGCGATATA CATGTCCGTTTGCGTCTCCTGCGCTACTGTTCATTCCGCGTATCTGTAAG ATGGTAAACCGAACCGTGACCGTTTCGGTTGGCAGCAGTAGCAACGGCTG GGAGAAGGGAATTACAAGTTTCGTTCCACGTTCCGTGCTTCTGTTGCAGG GTTGACACACGCCCTGAAAACGGACAGACGCATCGATCGTTTTTCGGAGA GTTAACCGAGCAGCACTTCAAGCACTCGAAGCTGCTGACGCTGGAAGAGC TGGAGGGCGGAATGCGTAGCATCAGTGTCATCGCGACGAGGTGCGTGTGT TTGCTTGCCTCTCAGGTTTCACCAGGCGAAGAAGAAAATGGTGTCGTCCA TGACACAACAAAGGTCCAAATCATTCTAGTGTTTGGGCCGAACGCCCTCA GCGTGAACATCGCCTGTCTCGCACGACTCCATATGTACAACCTCCGCAAG GTTGTCCCCAACATTGTTTCAGGTGTTCATCAACGATCTGTTGAAAGTCG TAGAGGCAGTCCGGAAGGGAGTAAAAGTAGGAGAAAATTGGGTGTCGGGA ATGCTGTTCGCGGATGATTTTGTTGGTATGTCTGACACCCTCTGAGGAAC CGCAACTGCAAATTGACGCAGCGAAGGAGTTTGCTGGTAAGTGGAGACTG TCTGCCAACGTTAAGAAGAGTGCCGTCATGGTATGCAACGAGGACAAGGA GGAACCAGTCTTAGAGTATTGATGGAAGTGGCGGGTCGAGGAGCTTGCAG TAGTGGACCAGTACATATATCTCAGAGTAGAGATAGCAAAAGACCGCTAG TGGAATACACACATGTCCAAGGTAGCGGCACAGGGCAAAGCACGAGCAGG GAAGCTGCACCCAATCCTCGCAAACCGGCACCTCGATGCATCAAATTGAC AGTTTTGAAGAGCGTAATCACACCGACGCTAGAGTACGCGGGAGAAGTAT GGGAAGGAAATAAGAAGGTAGTCAAAGAACTGGAGGCGGCGCAGATGAAA GTAGCGAAAATGACCCTAGGATGCTCCAAGCGCACAAGTAAGGCAGCCGT CAGGGCAGAACTGGGGATCCGATGCATACGATCGGGAAGAGACGCAAGGA AGCTGACATGGCAGTATCGCATGTGCGGGATGGGAGAGGAGAGGTTGCCG AGAATAGTATGGGAGGCGAAGTGGGCAAACAAAAACAGGGGTAGACAACC CACGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGTTCGAAATCG ACGAAGATGAAACGCTGGAAACAGAGAGTCTACAGGGGTTCAAGGAGAAG ATATCTGCTGCTTGTGCCGAGAGAGAAGAACAGAATCTTAGGAAAGAAAC CGAGGATAAGGAGGGTCTAGAAGTGTACAGAATGTTGGAAAGAAGGAATA GGGTTCAAGGACTACCTACATGGACCAATGGATGCGGGGACAAAGCTTAA GATCAAATTCAGGACCGGGGACATTCGCCTTCGGAACGTCGACGAGGACA TAGGACGGTAGACGATGAAGACGATAAGATCAAATGTGATAGTGGCTCCG AGAGCGAAGACCGTGTTCATGTAGTTGCGGAATGTCCGTTGTACAAGGAG AGAGAAGTGTACCTGACTGAGCTGGGAAAAGTAAAGGAAAGATTCAGGGA GATGTTTGAGGCATGGATCTCCAGGAAAGACGGTAGCTGTACTGGGGCAT AGGAAGTGGGTTCAAAAGGCGGGAAGTGATATCGATAGGATAGATGGTTA GGACAGACATGTTTGAGCCACCTTTGACAAAGTAGGAAGGAACGATTGGC CATAGGTGATCGTTCCTGTGGGAACAATGCTCCGTCCTCTCGAGGACGCG TGGTCAATGGTCCACCCGCTCAGGCATGCAAAACATAAGAGTACGCCCCC CCCCCCCCCACCTCCCCCCCCTTGTAAGTGCACGCCAACGACATGATAAA AAGGGCGGTGTGGCGTCTGACTTTGTGCGGATGATTTCGTTGGGATATCG GAAACACCCGCAGGACCACAAAAACCTACTTAGTACTAGAACGCCCTAGC GATACCAGGAAAGACCAAATCTCCGATATCAAGGAAGGGCAGCGCACAAG TAGGCAAGGTCGGTGGGATCCTCCCGGAAAGAGGTAACCAAGAATTACAC GTAAAATACGAAAGAAACGCATAGAGAAACGGACAGAGCACAAAAATTGT AGGAGGTTTGCCTAAGGGAGCGGCCAATGATCGCATGGACAAGGCAAGCA GCAACTGAGTACGACCCTCCCGCTCTCCGCAACGCTACGCCTGCCCGCCA AAGACCGGAGCGCGAACGGGCGGATGCCTTACTGCGAGCTCAAAGATTGG TGAAGACGCACCCAGACACACGCGAAGGGCTACGGTTGAGTGGGAGAGTC GACTTGTTTTATGATACGGAGGTGTTCTGGTGCAATAAGACCAGCTTGTG CCAGTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig126:78470..83026-

>mRNA_E-siliculosus-1a_F_contig126.1609.1 ID=mRNA_E-siliculosus-1a_F_contig126.1609.1|Name=mRNA_E-siliculosus-1a_F_contig126.1609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1890bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig126:78470..83026- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCGCAGTCAGGCAAGACTGTCGGCATTGCTATTGTGGGTGAGGCCGCC
GTTCGTTCCACCATCCACGAAGGCAGGGAGATGGGTGCACACGGGAGCTG
TGGACGGATTTGGGGGCAACAACGCCTCCTTCTACGAGAACACGAGATGC
GCAGTCAGGCAAGACTGTCGGCATTGCTATTGTGGGTGAGGCCGCCGTTC
GTTCCACCATCCACGAAGGCAGGGAGATGGGTGCACACGGGAGCTGTGGA
CGGATTTGGGGGCAACAACGCCTCCTTCTACGAGAACACGAGGCCGGGAT
ATCCCGCTCACGCATTGAGAGCTATCGAGGCTGAGATTCGCCGAAGCGGC
CTCACCGGTAGCGGGGAGCTCTTGGTGGATCTCGGCGCCGGTACAGGGAA
ATTCACGCGCGAGATCCTTCCGTTCGCTCTCTCGGAAGGCCGGGATATCC
CGCTCACGCATTGAGAGCTATCGAGGCTGAGATTCGCCGAAGCGGCCTCA
CCGGTAGCGGGGAGCTCTTGGTGGATCTCGGCGCCGGTACAGGGAAATTC
ACGCGCGAGATCCTTCCGTTCGCTCTCTCGGAAGGCCTGTCCTTGGTTGG
GGTGGAGCCGGTAAAAGCCATGCGAGATCAGTTCGAGGCAGCTGTGCCTG
GGGTTCGAGTCGTTGAAGGCCTGTCCTTGGTTGGGGTGGAGCCGGTAAAA
GCCATGCGAGATCAGTTCGAGGCAGCTGTGCCTGGGGTTCGAGTCGTTGA
AGGTGTCGGAGAGGCCATTCCTATCCCGGATTCCTCGGCCAGAGCGTTGG
TCGCAGCCCAAAGCTTTCACTGGATGTCTTCGGCGGCTACCCTGCGAGAG
GTACACAGGGTGCTCGTGCCGGGCGGGTTGTTTGTGCTTGTGTGGAACAC
CCGCGATTGCACAAGGCCATGGGTGCGGTGTCGGAGAGGCCATTCCTATC
CCGGATTCCTCGGCCAGAGCGTTGGTCGCAGCCCAAAGCTTTCACTGGAT
GTCTTCGGCGGCTACCCTGCGAGAGGTACACAGGGTGCTCGTGCCGGGCG
GGTTGTTTGTGCTTGTGTGGAACACCCGCGATTGCACAAGGCCATGGGTG
CGCGCACTCGAAGACATAATCGACCCCTTCTACGGCGACGATGTGCCACG
GCAACAAGGTGGACAGTGGAGGCAATCCTTCCGAGCCCTCGAGCAGTCAA
GCGCACTCGAAGACATAATCGACCCCTTCTACGGCGACGATGTGCCACGG
CAACAAGGTGGACAGTGGAGGCAATCCTTCCGAGCCCTCGAGCAGTCAAG
GGTTGACACACGCCCTGAAAACGGACAGACGCATCGATCGTTTTTCGGAG
AGTTAACCGAGCAGCACTTCAAGCACTCGAAGCTGCTGACGCTGGAAGAG
CTGGAGGGCGGAATGCGTAGCATCAGTGTCATCGCGACGAGGGTTGACAC
ACGCCCTGAAAACGGACAGACGCATCGATCGTTTTTCGGAGAGTTAACCG
AGCAGCACTTCAAGCACTCGAAGCTGCTGACGCTGGAAGAGCTGGAGGGC
GGAATGCGTAGCATCAGTGTCATCGCGACGAGACCGGAGCGCGAACGGGC
GGATGCCTTACTGCGAGCTCAAAGATTGGTGAAGACGCACCCAGACACAC
GCGAAGGGCTACGGTTGAGTGGGAGAGTCGACTTGTTTTATGATACGGAG
GTGTTCTGGTGCAATAAGACCAGCTTGTGCCAGTGAACCGGAGCGCGAAC
GGGCGGATGCCTTACTGCGAGCTCAAAGATTGGTGAAGACGCACCCAGAC
ACACGCGAAGGGCTACGGTTGAGTGGGAGAGTCGACTTGTTTTATGATAC
GGAGGTGTTCTGGTGCAATAAGACCAGCTTGTGCCAGTGA
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