mRNA_E-siliculosus-1a_F_contig126.1609.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: D8LBT3_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT3_ECTSI) HSP 1 Score: 280 bits (717), Expect = 2.320e-92 Identity = 147/184 (79.89%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 28 MRSQARLSALLLWVRPPFVPPSTKAGRWVHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVR 579
MR QARLSALL VRPPFVPPSTKAGRWVHT AV GFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTR ILPFALSEG GEAIPIPDSSARALVA QSFHWMSSAATLREVHRVLVPGGLFVL+WNTRDCTRPWVR
Sbjct: 1 MRGQARLSALLSRVRPPFVPPSTKAGRWVHTEAVGGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTRNILPFALSEG----------------------------AGEAIPIPDSSARALVAPQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 156
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A3P4AWJ1_9BURK (Putative methyltransferase YcgJ n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4AWJ1_9BURK) HSP 1 Score: 164 bits (415), Expect = 2.080e-45 Identity = 111/280 (39.64%), Postives = 148/280 (52.86%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLF--YDTEVF 942
+H A DG+ A Y RP YP I+ +R + +G +VDLGAGTGKFT P + G +++ VEPV +M D+ AA+PGVR + G EAIP+PD+SA A+V AQ+FHW + AA L E+HRVL PGG LVWN RD PWV L+ I++ Y +D PR G WR +F P G FG L E+H+ + E + +RS S IA PERER + + L+ P+ L GR ++ YDT F
Sbjct: 7 IHHAAADGYT-QQADAYVRGRPDYPTQ----IDGWLRDAVGLRAGTTVVDLGAGTGKFT----PRLAATGATVIAVEPVPSMLDKLTAALPGVRALTGTAEAIPLPDASADAVVCAQAFHWFAHAAALDEIHRVLKPGGRLALVWNMRDARVPWVARLDAIVNA-YENDAPRFYTGAWRAAF-----------PHAG------FGPLDERHYPNRHAGPPEHVILDRVRSTSFIAALPERERTQVDTQLRALIDAEPE------LHGRPEVAVPYDTAAF 253
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A3G8GE75_9BURK (Class I SAM-dependent methyltransferase n=7 Tax=Burkholderiales TaxID=80840 RepID=A0A3G8GE75_9BURK) HSP 1 Score: 164 bits (414), Expect = 3.100e-45 Identity = 110/283 (38.87%), Postives = 150/283 (53.00%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNKT 957
+H A DG+ A Y RP YP + + GL +G ++DLGAGTGKFT P L+ G S++ VEPV AM D+ AA PGVR + G +AIP+PD+S +V AQ+FHW ++A L E+HRVL PGG LVWN RD PWV A++ I++ F GD PR G WRQ+F P G FG + E+H+ + + E+ + +RS S I+ P +RA R Q L++ P+ LR V L YDT + +T
Sbjct: 7 IHHSAADGYT-KGADTYVRGRPDYPPEIAWWLRDTL---GLH-AGATVLDLGAGTGKFT----PRLLATGASVIAVEPVAAMLDKLAAAHPGVRPLVGTADAIPLPDASVDVVVCAQAFHWFATAEALDEIHRVLKPGGRLGLVWNMRDANVPWVAAIDRIVNEFEGD-APRYYTGAWRQAF-----------PHPG------FGPMDERHYANGHTGSPEDVILNRVRSTSFISALPPEQRAGVDQRLQALIQAEPE----LRGHAAVTLPYDTAAYCLART 258
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A7U9Q2G0_PSEFL (Methyltransf_11 domain-containing protein n=23 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A7U9Q2G0_PSEFL) HSP 1 Score: 163 bits (412), Expect = 5.660e-45 Identity = 109/282 (38.65%), Postives = 145/282 (51.42%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
+H A DG+ A Y RP YP A+E +R + G G ++VDLGAGTGKFT +L + G ++ VEPV+ MR + AA P +V+EG EA+P+ D+S LV AQ+FHW + A L E+HRVL PGG LVWN RD PWV L+ I++ D PR G WRQ+F P G FG L EQHF T E+ + +RS S IA P+ ER + L+ + P LR +V + Y T F+C +
Sbjct: 6 IHHAAADGYQ-QAADTYVRGRPDYPP----ALEPWLRETLGLGPGRVVVDLGAGTGKFTGRLL----ATGAQVIAVEPVEQMRARLAAAQPEAQVLEGSAEALPLKDASVDVLVCAQAFHWFAHRAALEEIHRVLKPGGKLALVWNLRDARVPWVARLDAIVNALQAD-TPRYYTGAWRQAF-----------PHPG------FGPLQEQHFTQGHSGTPEDVIFNRVRSTSFIAALPQAEREAVDRQIVALIDSEPQ----LRGKAQVTVPYTTAAFYCTR 256
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A2S5KHR5_9PROT (SAM-dependent methyltransferase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2S5KHR5_9PROT) HSP 1 Score: 163 bits (412), Expect = 6.150e-45 Identity = 111/284 (39.08%), Postives = 154/284 (54.23%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRP--ERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
VH A G+ +A+ Y RP YPA + A + GL G +VDLGAGTGKFTR ++ + G ++ VEPV AMR + + A+P V+ +EG AIP+PD+S LV AQSFHW ++ ATL EV RVL PGG F L+WN RD WV A+ +II P+ GD PR G WRQ ++ + F L +Q + H+ L + EE + S+S IA P E+++ +A LR L+ +P R+ L+ Y+TE +WC K
Sbjct: 4 VHDAAQSGYSQASAT-YRRGRPEYPAEVDSWLTATL---GL-GPSATVVDLGAGTGKFTRRLV----ATGAEVIAVEPVAAMRAELQQALPQVQALEGNAAAIPLPDASVDVLVCAQSFHWFATEATLAEVARVLKPGGRFALIWNVRDERVDWVAAITEIITPYEGD-APRFYKGDWRQPLQSA-------------LFQQTFTPLQQQLWPHAHLGSSEEVIIARSLSVSFIAALPQTEQDKVEAALRG--LISRYPQLRDQQELA----FPYNTEAYWCQK 258
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A7V7E654_9PROT (Class I SAM-dependent methyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7E654_9PROT) HSP 1 Score: 162 bits (411), Expect = 7.540e-45 Identity = 117/285 (41.05%), Postives = 146/285 (51.23%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAE-IRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLF--YDTEVFWCNK 954
VH A GF A Y RP YPA A++ I + GL+ SG +VDLGAGTGKFTR +L + G + VEPV AMR QF PG V++G EAIP+PD SA ALV AQSFHW ++ L E+ RVL PGG+ LVWN RD T WV ++ II PF G PR G WRQ F P G FG+L + F H +E+ L + S+S IA PE + THPD L+G+ ++ Y TE F C +
Sbjct: 4 VHEAASVGFS-IQAEAYRRGRPDYPA----AVDGWLIGQLGLS-SGRSVVDLGAGTGKFTRRLL----ATGARVTAVEPVAAMRAQFVLTAPGTLVLDGTAEAIPLPDGSADALVCAQSFHWFANLVALSEIRRVLKPGGVLGLVWNVRDETVDWVASVGRIIQPFEGS-TPRYHKGDWRQLF-----------PAEG------FGQLEQTVFPHGHQGAVEQVLIDRILSVSFIAALPESMHNLVAAELRHFAATHPD------LAGQKEIIFPYRTEAFCCRR 254
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A8J6VPN7_9CYAN (Methyltransferase domain-containing protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6VPN7_9CYAN) HSP 1 Score: 162 bits (410), Expect = 1.150e-44 Identity = 102/281 (36.30%), Postives = 142/281 (50.53%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
VH A GF A YE RPGYPA A+ ++ + S T +VDL AGTGKFTR++ G +V +EPV+ MR +FEA +P + V+ G E+IP+ +S + AQ+FHW A L E+HRVL PGG L+WN RD + WV + II P GD PR + GQWR +F + F L Q F ++ L+ + SIS IA + + L + + L++ HP TR+ ++ Y TEVFWC +
Sbjct: 7 VHAAARQGFQ-IGADAYERGRPGYPAAAIEFLQQTLNLSSAT----TVVDLAAGTGKFTRQLQDL----GCQVVAIEPVEGMRQKFEALLPNIPVLNGTAESIPLAAASTDVVTVAQAFHWFQGEAALAEIHRVLKPGGYLGLIWNVRDESFDWVAQISAIITPHEGD-APRYRTGQWRTAFEQTD----------------LFTPLETQIFSYAHQYDLDAAIDRVASISFIAALNAQTQQTVLRQVRELLEHHPQTRD----RPIIEHPYRTEVFWCTR 257
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: A0A126S4J6_PSEPU (Methyltransferase n=17 Tax=Pseudomonas TaxID=286 RepID=A0A126S4J6_PSEPU) HSP 1 Score: 162 bits (409), Expect = 1.490e-44 Identity = 109/281 (38.79%), Postives = 146/281 (51.96%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
VHT A GF +S YE RP YP A++ +R + +G ++DLGAGTGKFTR + A L VEPV AMR++F +P V V+EG + IP+ D+S + LV AQ+FHW + AA LRE+HRVL PGG L+WN RD T WV + +II P+ GD PR G+WR +F S L H + + + LE L RS+S IA P+ E+ + R Q LV HP L+ RV Y T+ + C +
Sbjct: 4 VHTSASTGFS-RQSSNYEQGRPDYPV----ALQGWLRDTLGIDAGTPVLDLGAGTGKFTRLLTALAPR----LTAVEPVAAMRERFHERLPEVPVLEGTAQHIPLADASQQVLVCAQAFHWFADAAALREMHRVLAPGGRLGLIWNVRDETVDWVARITEIITPYEGD-TPRFHTGRWRDAFAGSRFSAPQLTT------------LPHVHEGNPQTVILERL----RSVSFIAALPQAEQDRVMARLQDLVDNHP----ALKGRERVAFPYQTQAYVCQR 254
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: UPI001F0B79BD (class I SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. LAM7114 TaxID=2487275 RepID=UPI001F0B79BD) HSP 1 Score: 160 bits (404), Expect = 8.050e-44 Identity = 103/265 (38.87%), Postives = 141/265 (53.21%), Query Frame = 1
Query: 151 ASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFW 945
A YE +RP YP AL AE+ + +G +VDLGAGTGKFTR + AL+ G +V VEPV MR++ +PGV V G EA +PD+SA A+VAAQS+HW A L EV R+L PGG LVWNT D + PWVR +DII F D+P G WR++F R +G ++E+H+ + T+ ++ M S S +A E+ ++ +H TR GR+DL Y T+V+W
Sbjct: 15 AGVYERSRPSYPMAAL----AELADALPLEAGRRVVDLGAGTGKFTRLL---ALT-GAEVVAVEPVAEMRERLAELLPGVNVTAGTAEATGLPDASADAVVAAQSWHWFQEADALAEVERLLRPGGALALVWNTYDTSVPWVRDFQDIIFRFAPRDLPSPLDGGWRKAFAG----------------RDGWGAISERHWPNPHSTTVTDVVERMMSSSHVAVMSPAEQEGVRAEVLSVLGSHDATRR----EGRIDLPYTTDVYW 251
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Match: Q1I8Z5_PSEE4 (Methyltransf_11 domain-containing protein n=4 Tax=Pseudomonas entomophila TaxID=312306 RepID=Q1I8Z5_PSEE4) HSP 1 Score: 160 bits (404), Expect = 8.270e-44 Identity = 107/281 (38.08%), Postives = 150/281 (53.38%), Query Frame = 1
Query: 112 VHTGAVDGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVRVVEGVGEAIPIPDSSARALVAAQSFHWMSSAATLREVHRVLVPGGLFVLVWNTRDCTRPWVRALEDIIDPFYGDDVPRQQGGQWRQSFRALEQSRVDTRPENGQTHRSFFGELTEQHFKHSKLLTLEELEGGMRSISVIATRPERERADALLRAQRLVKTHPDTREGLRLSGRVDLFYDTEVFWCNK 954
VH A GF + + YE RP YP A++ +R + G+G ++DLGAGTGKFTR + P A L VEPV AMR++F +P V V+EG + +P+ D+S + LV AQ+FHW + AA L E+HRVL PGG LVWN RD + WV + +II P+ GD PR G+WR++F D R + T L H + + +E L RS+S IA P+ E+ + R Q L+ HPD L+ R+ Y T+ + C +
Sbjct: 4 VHASASTGFTRQSGN-YEQGRPDYPI----ALQGWLRDTLGVGNGTTVLDLGAGTGKFTRLLTPLAPR----LTAVEPVAAMRERFHEQLPEVPVLEGTAQHMPVADASQQVLVCAQAFHWFADAAALAEMHRVLAPGGRLGLVWNVRDESVDWVARITEIITPYEGD-TPRFHTGRWREAF--------DGRWFSAPT----LTTLPHVHEGSPQTVIIERL----RSVSFIAALPQVEQDKVMARLQDLIDHHPD----LKGRERIAFPYQTQAYRCQR 254 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig126.1609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig126.1609.1 >prot_E-siliculosus-1a_F_contig126.1609.1 ID=prot_E-siliculosus-1a_F_contig126.1609.1|Name=mRNA_E-siliculosus-1a_F_contig126.1609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=315bp MRSQARLSALLLWVRPPFVPPSTKAGRWVHTGAVDGFGGNNASFYENTRPback to top mRNA from alignment at E-siliculosus-1a_F_contig126:78470..83026- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig126.1609.1 ID=mRNA_E-siliculosus-1a_F_contig126.1609.1|Name=mRNA_E-siliculosus-1a_F_contig126.1609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4557bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig126:78470..83026- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig126:78470..83026- >mRNA_E-siliculosus-1a_F_contig126.1609.1 ID=mRNA_E-siliculosus-1a_F_contig126.1609.1|Name=mRNA_E-siliculosus-1a_F_contig126.1609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1890bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig126:78470..83026- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |