prot_E-siliculosus-1a_F_contig126.1600.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig126.1600.1
Unique Nameprot_E-siliculosus-1a_F_contig126.1600.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length284
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig126.1600.1 vs. uniprot
Match: A0A6H5JNX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX8_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 1.210e-191
Identity = 269/284 (94.72%), Postives = 281/284 (98.94%), Query Frame = 0 
Query:    1 RETVFSPGTPARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSALSDFGRSTAEAARAVGGILSAYEVASVNRDVSNGPVALTFDVGKDSDAAREVWQSTQPASYDRGWGTWDWTSTDILAYWEANWGVFSLCLRLHAPDTAWGRTIRAVYDLTTAFDALPKDFLDRVLKLAWAARPSNDGLQEVISRNSTETVSPYPRRQTPRAVMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVSPRGQCFAPDALCHIKGVVTGLSRGGGPIMLGAML 284
            R+TVFSPGTPARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSALSDFGRSTAEAARAVGGILSAYEVASVNRDVSNGP+ALTF+VGKDS+AAREVWQSTQPASYDRGWGTWDWTSTDILAYWEANWGVFSLCLRLH PDTAWGRTIRAVYDLTT FDALPKDFLDRVLKLAWAARPS+DGLQE+ISRNST+T+SPYPR QTPR+VMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVSPRG+CFAPDALCH+KGVVTGL+RGGGPIMLGAML
Sbjct:  426 RDTVFSPGTPARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSALSDFGRSTAEAARAVGGILSAYEVASVNRDVSNGPLALTFNVGKDSNAAREVWQSTQPASYDRGWGTWDWTSTDILAYWEANWGVFSLCLRLHGPDTAWGRTIRAVYDLTTGFDALPKDFLDRVLKLAWAARPSSDGLQEMISRNSTKTISPYPRTQTPRSVMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVSPRGKCFAPDALCHVKGVVTGLARGGGPIMLGAML 709
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig126.1600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNX8_9PHAE1.210e-19194.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig126contigE-siliculosus-1a_F_contig126:19628..20479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig126.1600.1mRNA_E-siliculosus-1a_F_contig126.1600.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig126 19628..20481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig126.1600.1 ID=prot_E-siliculosus-1a_F_contig126.1600.1|Name=mRNA_E-siliculosus-1a_F_contig126.1600.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=284bp
RETVFSPGTPARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSAL
SDFGRSTAEAARAVGGILSAYEVASVNRDVSNGPVALTFDVGKDSDAARE
VWQSTQPASYDRGWGTWDWTSTDILAYWEANWGVFSLCLRLHAPDTAWGR
TIRAVYDLTTAFDALPKDFLDRVLKLAWAARPSNDGLQEVISRNSTETVS
PYPRRQTPRAVMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVS
PRGQCFAPDALCHIKGVVTGLSRGGGPIMLGAML
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