mRNA_E-siliculosus-1a_F_contig1015.157.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1015.157.1 vs. uniprot
Match: D8LQJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQJ3_ECTSI) HSP 1 Score: 2949 bits (7645), Expect = 0.000e+0 Identity = 1636/2001 (81.76%), Postives = 1674/2001 (83.66%), Query Frame = 1
Query: 214 MEESYGAVGLAIFRLVADSGEEAECVKSQAILRSVLQRHPVIRGFALSTLAKRLREGATAGNQPSQRHRASAGASAEARVPHTGIRLALEVLLASYHPSASHVVAPVVDALGDSSLEALLHTQGGTSPLLPWAARLCLLHACLAGASAGSKRWRWLPTVADSACSLALQEIATEGSSSLSGSDAGKXXXXXXGHGAKSAPTKQIANRVAAGTDKAEIYQATLMADVCAELVRVEVAGPAAVSTKKSGFLFGSLGTTPDDVVRISSAGAAASLPERHAADSFRLKLQGLRDALLSRRGSEGNAPVGQSVPSVRTIIGDVALEDRDIHPQAVKRALERGRCGEAFILAVQAALKEQLTPTSTAEAKDQQFSSNSGRRVSVNLKLALETCLFGVGLAGGRGLLDAVVPDGDEIGFTSTSSSIRATGTTEARQACALMQGLVEEGTRIRDLLLVLVGMYQERERLPPTSSPAISMDSGRPTGAQVVATVQSACDFRRRTLATVVGAFVGWLADTPWVWGATEGVEGEDWEGDFEAAAMATFVVFPIPGAACADEGIRTAGLVERVRSDVRESCPYNQDSSGEGQPRNGSVGSRGVDPTEVLDRLVAGAAMAMGRVDADEVEWLDVLRRVATAGGASDALKTYAIACVERSASLGGQAPFMVSGKRRFSQVGGKELWGLLQGACLVHEEKMPASLIVRTAAAVVTASRKTCQSWMVSPGLLGSSPIRVVIDMLTAAKGCLSPSDLLAGLLEGPGDDGPALAADVFAAFIAASAAGHGRTAGGNNEVGDLRSLSMAWLHGALATAVLPVRTPAGSTVDLDRVMSATALTRVLIQRVPFEAKPVLLAVEEAAELATAGRGVGGCTRRSGKSRRVSGRGVRENLDGDAASPLASLLKLAGAAKQSRLLPLPVPATGSPPRSAGLKYGEASGAGAVGVGDDEESPAKDRDGWQADASAAFVTAGLLLDAFVRSPTAARRSIREAMQQGGCGNELQVVQRVLRTALCTAPASPGQPLGGIPTTLPAGSGDRKVAACLLVGFLVESGVPGWDETKAAMTPPPPQLLVATEEAVRTEGESYVWHSDHSRQQLTALRLEVMLQSLLCDVGGSRLIGDMDIEKSFPDVFRTARTLARAIAHHASALVTRTNQGQEAWRTNDYHRFQSGGGGFEGVDPRWPSVVGGSCSRDGEGAGNRQLELPRRALAGRLQHSPAAAALTSWVSSIVKTVKQFRRWLPWQPLADELRELVLRNARQKPVRQPVSGGERNETEGRTLAAEAAVFAVSELLLAWDEGGEEVVPAVFQSVLCSKALKIAVAPVASDAPPPIWLELLRCLIDEGQCDVSGWMSSCVNGSTQQDPLAMASAAAVWIGGDGPRAGQRSRRGTHEAWVYWYGARLGSLIPMGDADFGDWLILSSATGASAGGGVQVRVEGLVRTIQPDEWEHWGRSPLQAAWNFPGTWAAVSQSSESTSTEGAPPAILLPQFASWLRVVLRGGSTCPKHLLEAYLRRMALEVYLPCQFGRASNEMARQWLAVLIEAEATAEESGRKRAKMAADAVVCDGGSVTADPSSGSAGGMVSACHLVVKAFFREELLRFGSGEAPAAPNGGPMSWLWPLEAVVAACGNSGSFGGGSLARRRRGSLGPEGIDSDASSRITLDGPPSALARALSTVPHDLLCGSRRFGMGGQPPPALATLRAFATRVVDLTARALATPPCRQWSVARQLLLGLGLLYHALAKPVPARGGKLQKSFGAPSRAGAVESDSAAQEAAQAVALSAIEGLVRIALGLGNLGVGERESGGGGNRGSAAASKSGNPLLTSACLALRPLETGGCAGADDFARALMGAGAWRAETAFFGERSAAQASSSVKAPSLGKTAPALVLTASLAPSXXXXXXXXXXXXXXXQGHRLSSPGATPAVEPHQSVGGDQASGQSTADCCISLAQELVGGAQPCSSGRGEREQVVGSPRAPSWGMPARQKKKARLSTNAMEGKSPPPSSPRRVLPMRXXXXXXXXEGSE 6216
MEESYGAVGLAIFRLVADSGEEAEC+KSQAILR VLQRHPV+RGFALSTLA+RLREGATAGNQPS+RHRASAGASAEARVPHTGIRLALEVLLASYHPSASHVV+PVVDALGDS+LE GGTSPLLPWAARLCLLHACLAG SAGSKRWRWLPTVADSACSLALQEIATEGSSS+SGS+AGKXXXXXXGHGAKSAPTK+IANRVAAGTDKAE+YQATLMADVC EL RVEVA PAAVSTKKSGFLFGSLGTTPDDV RISSAGAAASLP RHAADSFRLKLQGLRDALLSRRGSEGNAPVGQSVPSV TIIGDVALED DIHPQAVKRALERGRCGEAFILAVQAALKEQLTPTST EAKDQQFSSN GRR+SVNLKLALETCLFG GLAGGRGLLDAVVPDGDEIGFTSTSSS RA GTTEARQACALMQGLVEEGTRIRDLLLVLVGMYQERERLPPTSSPAISMDSGR GAQ APFMVSGKRRFSQVGGKELWGLLQGACLVHEEKMPASLIVRTAAAVVTASRKTCQS MVSPGLLGSSPIRVVIDMLTAAK CL+ SDLL GLLE PGDDGPALAADVFAAFIAASAAG+GRTAGG+NEVGDLRSLSM+WLHGALATAVLPVRTPAGSTV+L+RVMSATALTRVLIQRVPFEAKPVLLAVEEAAELATAGRGVGGCTRRSGKSRRVSGRG ENLDGDAASPLASLLKLAGAAKQSRLLPLPVP+T SPPRSAGLK GEASGAGAVG GIPTTLPAGSGDRKVAACLLVGFLVESGVPGWDETKAAMTPPPPQLLVA EE+VRTEGES+VWHS HSRQQLTALRLEVMLQSLLCDVGGSRLIGDMD+EKSFPDVFRTARTLARAIAHHASALVTR NQGQ+AWRTNDYHRFQSGGGGFEGVDP WPS+VGGSCSR GEGAGNRQL+LPRRALAGRLQHSPAAAALTSWVSSIVKTV+QFRRWLPWQPLADELRELVLRNAR+KPVRQ VSGGERNET+GRTLAAEAAVFAVSELLLAWDEGGEEVVPAVFQSVLCSKAL IAVAPVASDAPPPIWLELLRCL+DEGQCD+SGWMSSC++GS QQDPLAMASAAAVWIGGDGPRAGQRSRRGTHEAWV+WYGA+LGSLIP GDADFGDWLILSSATGASA GGVQVRVEGL RTIQPDEWEHWGRSPLQAAWNFPGTWAAVSQ SES S+EGAPPAILLP FASWLRVVLRGGSTCPKHLLEAYLRRMALEVYLPCQFGRASNEMARQWLAVLIEAEATAE SGRKRAKMAADAVVCD GSVTADPSSGSA GMVSACHLVVKAFFREELLRFGSGEAPAAPNGGPMSWLWPLEAVVAACGN+GSFG GSLARRRRGSLGPEGIDSDASSRITLDGPPSALARALSTVPHDLLCGSRRFGMGGQPPPALATLRAFATRVVDLTARALATPPCR WSVARQLLLGLGLLYHALAKPV ARGGKLQKSFGAPSRAG VE DSAAQEAAQAVALSAIEGLVRI+LGLGNLGVGER+SG GGNRGSAAASKSGNPLLTSACLALRPLETGGCAGADDFARALMGAGAWRAETAFFGERSAAQASSSVKAPSL TAPAL TASLA S XX QGHRLSSPGATPAVEPH SVGGDQASGQSTADCCISLAQELVGGAQ CSSGRGEREQVVGSPRAPSW MP+RQKKKARLSTNAMEGKSPPPSSPRRVLPMRXXXXXXXXEGSE
Sbjct: 1 MEESYGAVGLAIFRLVADSGEEAECLKSQAILRCVLQRHPVVRGFALSTLARRLREGATAGNQPSRRHRASAGASAEARVPHTGIRLALEVLLASYHPSASHVVSPVVDALGDSNLE------GGTSPLLPWAARLCLLHACLAGTSAGSKRWRWLPTVADSACSLALQEIATEGSSSVSGSEAGKXXXXXXGHGAKSAPTKEIANRVAAGTDKAEMYQATLMADVCTELARVEVAEPAAVSTKKSGFLFGSLGTTPDDVARISSAGAAASLPGRHAADSFRLKLQGLRDALLSRRGSEGNAPVGQSVPSVTTIIGDVALEDLDIHPQAVKRALERGRCGEAFILAVQAALKEQLTPTSTTEAKDQQFSSNRGRRISVNLKLALETCLFGSGLAGGRGLLDAVVPDGDEIGFTSTSSSTRAKGTTEARQACALMQGLVEEGTRIRDLLLVLVGMYQERERLPPTSSPAISMDSGRLAGAQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------APFMVSGKRRFSQVGGKELWGLLQGACLVHEEKMPASLIVRTAAAVVTASRKTCQSRMVSPGLLGSSPIRVVIDMLTAAKDCLTASDLLTGLLEVPGDDGPALAADVFAAFIAASAAGNGRTAGGDNEVGDLRSLSMSWLHGALATAVLPVRTPAGSTVELNRVMSATALTRVLIQRVPFEAKPVLLAVEEAAELATAGRGVGGCTRRSGKSRRVSGRGGGENLDGDAASPLASLLKLAGAAKQSRLLPLPVPSTVSPPRSAGLKCGEASGAGAVGA-------------------------------------------------------------------------------GIPTTLPAGSGDRKVAACLLVGFLVESGVPGWDETKAAMTPPPPQLLVAAEESVRTEGESHVWHSYHSRQQLTALRLEVMLQSLLCDVGGSRLIGDMDVEKSFPDVFRTARTLARAIAHHASALVTRPNQGQQAWRTNDYHRFQSGGGGFEGVDPHWPSIVGGSCSRGGEGAGNRQLKLPRRALAGRLQHSPAAAALTSWVSSIVKTVRQFRRWLPWQPLADELRELVLRNARRKPVRQLVSGGERNETQGRTLAAEAAVFAVSELLLAWDEGGEEVVPAVFQSVLCSKALNIAVAPVASDAPPPIWLELLRCLVDEGQCDMSGWMSSCLDGSAQQDPLAMASAAAVWIGGDGPRAGQRSRRGTHEAWVHWYGAKLGSLIPTGDADFGDWLILSSATGASASGGVQVRVEGLARTIQPDEWEHWGRSPLQAAWNFPGTWAAVSQRSESQSSEGAPPAILLPPFASWLRVVLRGGSTCPKHLLEAYLRRMALEVYLPCQFGRASNEMARQWLAVLIEAEATAEGSGRKRAKMAADAVVCDWGSVTADPSSGSAVGMVSACHLVVKAFFREELLRFGSGEAPAAPNGGPMSWLWPLEAVVAACGNNGSFGRGSLARRRRGSLGPEGIDSDASSRITLDGPPSALARALSTVPHDLLCGSRRFGMGGQPPPALATLRAFATRVVDLTARALATPPCRHWSVARQLLLGLGLLYHALAKPVSARGGKLQKSFGAPSRAGDVELDSAAQEAAQAVALSAIEGLVRISLGLGNLGVGERDSGEGGNRGSAAASKSGNPLLTSACLALRPLETGGCAGADDFARALMGAGAWRAETAFFGERSAAQASSSVKAPSLDNTAPALEQTASLALSLPPPPXXLSPQAGPEQGHRLSSPGATPAVEPHHSVGGDQASGQSTADCCISLAQELVGGAQQCSSGRGEREQVVGSPRAPSWDMPSRQKKKARLSTNAMEGKSPPPSSPRRVLPMRXXXXXXXXEGSE 1744 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1015.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1015.157.1 >prot_E-siliculosus-1a_F_contig1015.157.1 ID=prot_E-siliculosus-1a_F_contig1015.157.1|Name=mRNA_E-siliculosus-1a_F_contig1015.157.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=2003bp MEESYGAVGLAIFRLVADSGEEAECVKSQAILRSVLQRHPVIRGFALSTLback to top mRNA from alignment at E-siliculosus-1a_F_contig1015:23467..32749- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1015.157.1 ID=mRNA_E-siliculosus-1a_F_contig1015.157.1|Name=mRNA_E-siliculosus-1a_F_contig1015.157.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9283bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1015:23467..32749- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1015:23467..32749- >mRNA_E-siliculosus-1a_F_contig1015.157.1 ID=mRNA_E-siliculosus-1a_F_contig1015.157.1|Name=mRNA_E-siliculosus-1a_F_contig1015.157.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=12018bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1015:23467..32749- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |