prot_E-siliculosus-1a_F_contig12464.1536.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12464.1536.1
Unique Nameprot_E-siliculosus-1a_F_contig12464.1536.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length81
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12464.1536.1 vs. uniprot
Match: A0A6H5K6T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T5_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.410e-26
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    6 MGVAFKLRLTFLEPTKTRGRWLKENAPDRVVMLPRATYRGRGCSSTEAWFIWET 59
            MGVAFKLRLTFL P K+RGRWLK+N PDR+VMLPRATYR R CSSTE WF+WET
Sbjct:    1 MGVAFKLRLTFLGPAKSRGRWLKDNPPDRIVMLPRATYRRRRCSSTETWFVWET 54          
BLAST of mRNA_E-siliculosus-1a_F_contig12464.1536.1 vs. uniprot
Match: A0A6H5K3H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H5_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.610e-24
Identity = 47/72 (65.28%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    3 VGRMGVAFKLRLTFLEPTKTRGRWLKENAPDRVVMLPRATYRGRGCSSTEAWFIWETGRGGEEGRKPVICFS 74
            V R+GVAFKLRL+FLEPTKTRG+WLK+N P  VV+LPRATY GR CSSTEAWFIW     G E       F 
Sbjct:  105 VVRVGVAFKLRLSFLEPTKTRGKWLKDNPPSAVVVLPRATYCGRVCSSTEAWFIWHLASDGVERPGQAFFFD 176          
BLAST of mRNA_E-siliculosus-1a_F_contig12464.1536.1 vs. uniprot
Match: A0A252D8B1_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. RF31YmG TaxID=1932668 RepID=A0A252D8B1_9NOSO)

HSP 1 Score: 60.1 bits (144), Expect = 2.720e-9
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    6 MGVAFKLRLTFLEPTKTRGRWLKENAPDRVVMLPRATYRGRGC--SSTEAWFIWETGRGGEE 65
            +GVAF LRL++LEP K RG+WL E+ P ++++LPR ++ G G   S T AW IW+ G   E+
Sbjct:  110 VGVAFLLRLSYLEPCKDRGQWLAEHPP-KLIVLPRISFTGDGKVDSCTCAWMIWKKGYSSED 170          
BLAST of mRNA_E-siliculosus-1a_F_contig12464.1536.1 vs. uniprot
Match: A0A843RVX0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Luteitalea sp. TaxID=2004800 RepID=A0A843RVX0_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 8.120e-8
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query:   12 LRLTFLEPTKTRGRWLKENAPDRVVMLPRATYRGRGC--SSTEAWFIWETG 60
            LRL++LEPT  R R+L  N P  V+++PR  ++GRG   S T AWF+WE G
Sbjct:  128 LRLSWLEPTAARQRFLSANPPRTVIVMPRHDFKGRGQTDSVTSAWFVWEQG 178          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12464.1536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K6T5_9PHAE1.410e-2681.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3H5_9PHAE4.610e-2465.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A252D8B1_9NOSO2.720e-948.39Uncharacterized protein n=1 Tax=Nostoc sp. RF31YmG... [more]
A0A843RVX0_9BACT8.120e-850.98Uncharacterized protein (Fragment) n=1 Tax=Luteita... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12464contigE-siliculosus-1a_F_contig12464:119..361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12464.1536.1mRNA_E-siliculosus-1a_F_contig12464.1536.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12464 2..393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12464.1536.1 ID=prot_E-siliculosus-1a_F_contig12464.1536.1|Name=mRNA_E-siliculosus-1a_F_contig12464.1536.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=81bp
MRVGRMGVAFKLRLTFLEPTKTRGRWLKENAPDRVVMLPRATYRGRGCSS
TEAWFIWETGRGGEEGRKPVICFSLPDGAL*
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