prot_E-siliculosus-1a_F_contig1245.1528.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1245.1528.1
Unique Nameprot_E-siliculosus-1a_F_contig1245.1528.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length126
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: D7FHL9_ECTSI (Mitochondrial import inner membrane translocase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL9_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 6.520e-75
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0
Query:    1 MSWFRGKKEPESEPTPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGMGDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQGGGGI 125
            MSWFRGKKEPE E TPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGMGDLQAAMQ+EQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQGGG I
Sbjct:    1 MSWFRGKKEPEPESTPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGMGDLQAAMQIEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQGGGDI 125          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: A0A6S9DQ42_HETAK (Mitochondrial import inner membrane translocase subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DQ42_HETAK)

HSP 1 Score: 95.5 bits (236), Expect = 6.770e-23
Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 0
Query:    1 MSWFRGKK--EPESEPTPEPTFSSDTSAFEGS-TNFASGPPSRGGGGATSAGMGDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQ 120
            MSWFR  K  EP+SE + +  F+       GS  +F+S   S G G +       LQ  +Q EQQ+A +Q +V++LT++A  KC+ KPSSSLSSSEQ+CI++ V KY DTSEFVLGR+MK QQ
Sbjct:    1 MSWFRKSKQEEPKSEFSSDSGFNXXXXXXXGSGADFSSHDVSVGVGSSKPISQNQLQELVQQEQQRALIQTVVAKLTEIAHDKCVGKPSSSLSSSEQACIHSVVSKYLDTSEFVLGRMMKQQQ 123          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: K8YZ78_NANGC (Mitochondrial import inner membrane translocase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZ78_NANGC)

HSP 1 Score: 91.3 bits (225), Expect = 3.860e-21
Identity = 65/139 (46.76%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    1 MSWFR--GKKEPESEPTPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGMG-------------DLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQGGGG 124
            MSWF   GKKE   E + +  FSS  S FE          S GG GA  + +G              L+  +  EQQKA +Q++++RLT++AF  CI KP+SSLSS EQSCI ATV KY DTSEFVLGR+ +S Q G G
Sbjct:    1 MSWFGFGGKKEDTQESSYD--FSSSASGFE---------ESGGGVGAYDSSLGXXXXXXXXXXXXXQLEELVMAEQQKALVQSVIARLTEMAFETCITKPASSLSSGEQSCIQATVAKYLDTSEFVLGRVQRSAQRGQG 128          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: W7TJX5_9STRA (Mitochondrial protein translocase family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJX5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.730e-20
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 0
Query:   49 GMGDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQGGGG 124
            G G L+  +  EQQKA +Q++++RLT++AF  CI KP+SSLSS EQSCI ATV KY DTSEFVLGR+ +S Q G G
Sbjct:   89 GGGQLEELVMAEQQKALVQSVIARLTEMAFETCITKPASSLSSGEQSCIQATVAKYLDTSEFVLGRVQRSAQRGQG 164          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: A0A7S1UNE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNE0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.020e-16
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MSWFRGKKEPESEPTPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGMGDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQ-KPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQ 120
            MS++   K+P S PT E +FSS   ++   T+F++ P S     A ++G+ D+Q      +Q+  +Q +++ L+D AF +CI  KPS SLS  E +CI+ATV K+ DT+EF++GRL K QQ
Sbjct:    7 MSFWGSSKKPPSPPT-ETSFSSGDESYNVGTDFSAAPSS-----APTSGLADMQQFSLALRQQIMVQTVITDLSDTAFAQCITGKPSDSLSGKESACIHATVNKWMDTNEFMMGRLAKKQQ 121          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: A0A7R9UGB7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 8.040e-16
Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 0
Query:   26 AFEGSTNFASGPPSRGG------GGATSAGMGDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMK 117
            +F  S++F S P   GG      GGA  AG+ D+++ +  E+QKA++QA++  LT+LAF +CI KP SSL S E+SCI + V KY DT+EFVL R+ +
Sbjct:   51 SFGDSSSFGSAPAMGGGLGARAPGGAGMAGL-DIRSQLMAERQKAELQAVIGALTELAFEQCISKPGSSLGSGERSCIESVVGKYLDTNEFVLMRMTR 147          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: A0A482SEV0_9ARCH (Tim10/DDP family zinc finger protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEV0_9ARCH)

HSP 1 Score: 70.1 bits (170), Expect = 3.230e-12
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   31 TNFASGPPSRGG-GGATSAGMGDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQG 121
            T+FASGP S    G     G G+ Q  + V QQ+   Q ++ +LTDL+F +C+ KP +SLS SEQ+CI ATV K+ D S+ +L R+  SQ G
Sbjct:  116 TSFASGPSSSPSLGHDLGGGSGNFQEQLAVAQQQMIFQQVMIKLTDLSFERCVTKPGTSLSYSEQTCIQATVGKFVDCSQLILQRVQNSQGG 207          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: A0A7S2X4N8_PROMC (Mitochondrial import inner membrane translocase subunit (Fragment) n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2X4N8_PROMC)

HSP 1 Score: 67.4 bits (163), Expect = 4.360e-12
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    2 SWFRGKKEPESEPTPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGMGDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTS 108
            SWF G     ++ T         S+FE   +FAS P +     A       LQ A+  EQQK Q+QA + ++++LAF KC+ +PS SLSSSE+SCI+ T  +Y D S
Sbjct:    3 SWFGGGSSSNTDETXXXXSWDSGSSFESPGDFASAPSNS--SSAMRGSQASLQQAIMEEQQKQQIQAAIMKISELAFEKCVSRPSESLSSSEKSCISNTTERYLDCS 107          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: A0A8J2T0W3_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0W3_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 6.420e-12
Identity = 35/70 (50.00%), Postives = 52/70 (74.29%), Query Frame = 0
Query:   52 DLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQK-PSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQ 120
            +LQ A+  EQQ+A +Q ++++LT+++F  C+QK P S+LS+ E++CI+  V KY DTSEFVLGR  K  Q
Sbjct:   63 ELQRAVVAEQQRALVQQVIAKLTEVSFDTCLQKKPDSTLSAGERACIHTVVGKYLDTSEFVLGRSTKKAQ 132          
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Match: A0A061S2G3_9CHLO (Mitochondrial import inner membrane translocase subunit n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S2G3_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 1.000e-11
Identity = 31/61 (50.82%), Postives = 49/61 (80.33%), Query Frame = 0
Query:   52 DLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVL 112
            ++Q  +Q+EQ+KA++Q +VS+L ++AF KCI  P  S+S+SEQ+C+  TV ++FD+SEFVL
Sbjct:   11 EVQKFLQIEQEKAKLQEMVSKLANVAFDKCIGYPGRSMSNSEQNCVANTVARFFDSSEFVL 71          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1245.1528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL9_ECTSI6.520e-7596.80Mitochondrial import inner membrane translocase su... [more]
A0A6S9DQ42_HETAK6.770e-2349.59Mitochondrial import inner membrane translocase su... [more]
K8YZ78_NANGC3.860e-2146.76Mitochondrial import inner membrane translocase su... [more]
W7TJX5_9STRA7.730e-2060.53Mitochondrial protein translocase family n=1 Tax=N... [more]
A0A7S1UNE0_9STRA2.020e-1641.32Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7R9UGB7_9STRA8.040e-1646.94Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A482SEV0_9ARCH3.230e-1245.65Tim10/DDP family zinc finger protein n=1 Tax=archa... [more]
A0A7S2X4N8_PROMC4.360e-1240.19Mitochondrial import inner membrane translocase su... [more]
A0A8J2T0W3_9STRA6.420e-1250.00Mitochondrial import inner membrane translocase su... [more]
A0A061S2G3_9CHLO1.000e-1150.82Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810coord: 57..119
e-value: 1.4E-16
score: 61.7
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 62..121
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 57..115
e-value: 1.3E-18
score: 66.4
IPR039238Mitochondrial import inner membrane translocase subunit Tim8/13PANTHERPTHR19338TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOGcoord: 51..117
NoneNo IPR availablePANTHERPTHR19338:SF4TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 8Acoord: 51..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1245contigE-siliculosus-1a_F_contig1245:15213..17085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1245.1528.1mRNA_E-siliculosus-1a_F_contig1245.1528.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1245 15169..17622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1245.1528.1 ID=prot_E-siliculosus-1a_F_contig1245.1528.1|Name=mRNA_E-siliculosus-1a_F_contig1245.1528.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=126bp
MSWFRGKKEPESEPTPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGM
GDLQAAMQVEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINAT
VLKYFDTSEFVLGRLMKSQQGGGGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039238Tim8/13
IPR004217Tim10-like
IPR035427Tim10-like_dom_sf