prot_E-siliculosus-1a_F_contig1239.1491.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1239.1491.1
Unique Nameprot_E-siliculosus-1a_F_contig1239.1491.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length830
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1239.1491.1 vs. uniprot
Match: D7FJI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI0_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 5.840e-155
Identity = 244/252 (96.83%), Postives = 246/252 (97.62%), Query Frame = 0
Query:  578 MRHLPRTSAMRRGKDGASTSFGSEGGPFAEAPLQEQGEGSLSPKTSLTSLSSCHDLFSSLEEGRLQDATAGALARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISLSVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDKRQFPVQNTRQAQSRGQQMHEALGGPMAIL 829
            MRHLPRTSAMRRGKDGASTSFGSEGGPFAEAPLQEQGEGSLSPKTSL SLSSCHDLFSSLEEGRLQDATAGALARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISLSVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDKRQFPVQ++R     GQQMHEALGGPMAIL
Sbjct:    1 MRHLPRTSAMRRGKDGASTSFGSEGGPFAEAPLQEQGEGSLSPKTSLASLSSCHDLFSSLEEGRLQDATAGALARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISLSVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDKRQFPVQSSRIR--GGQQMHEALGGPMAIL 250          
BLAST of mRNA_E-siliculosus-1a_F_contig1239.1491.1 vs. uniprot
Match: D7FJI1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI1_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 1.240e-132
Identity = 241/332 (72.59%), Postives = 251/332 (75.60%), Query Frame = 0
Query:  173 MAAAVDETQMESSGVSDSYMTSTQMAYTSGLLAPPSKVPVMDPYRHRQLLHDRWVQRASQRLGDIATLKYGSVKDFFRMYDSNCDGVLDFDEFSEGITMCQLDHVFPRSLQRTLFDKIDTDKSGGIELDEFADFLGQSETKGPSSGEPSALQKEKTQQQADDVEARSVTLQPIQDHKVQRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAASRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNRDGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQASNAAMVEQAPPVESPEEEFFKARADHLHSVAVPSKE 504
            MAAAVDETQMESSGVSDSY+TSTQMAYTS            D +  +         R S  L   +T    + + FF      C         +   T+C                   + KSGGIELDEFADFLGQSETKG SSG+PSALQKEKTQQQADDVEARSVTLQPIQDHK QRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAASRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTN DGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQA    MVEQAPPVESPEEEFFKARADHLHSVAVPSKE
Sbjct:    1 MAAAVDETQMESSGVSDSYITSTQMAYTS------------DGFNVQA--------RDSVTLPPSST---AASRSFF-----GCT--------TPTATVCST--------------STSSAKSGGIELDEFADFLGQSETKGASSGDPSALQKEKTQQQADDVEARSVTLQPIQDHKAQRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAASRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNCDGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQA----MVEQAPPVESPEEEFFKARADHLHSVAVPSKE 278          
BLAST of mRNA_E-siliculosus-1a_F_contig1239.1491.1 vs. uniprot
Match: A0A7R9YBQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ5_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.330e-27
Identity = 73/234 (31.20%), Postives = 126/234 (53.85%), Query Frame = 0
Query:  227 VQRASQRLGDIATLKYGSVKDFFRMYDSNCDGVLDFDEFSEGITMCQLDHVFPRSLQRTLFDKIDTDKSGGIELDEFADFLGQSETKGPSSGEPSALQKEKTQQQADDVEARSVTLQPIQDHKVQRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAASRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNRDGNITVKEFAAFLNLDDHDPLYQPLFDGRR 460
            + RA  RL  +  LKYGSV+DFF  +D N +G +  +EFS       L+ + PR  QR +F+++D D+SG ++L+EF   L    T+  +  +P    +E+ +++   +   +   + ++D  +Q++  +L         +  +   + +T +L   F  + +D     +S +    ALGP G+N+   ++DLR++ + MD N D  I+  EF  FLN+DD DP Y P +DGRR
Sbjct:  164 LDRAIGRLQQLLVLKYGSVRDFFHTFDENHNGKITLEEFSRTFKRRNLERLIPRREQRLIFERLDADQSGSLDLEEFKSAL----TRETAFSQPLDRMREEAREKGVKLRRTNPRAELVRDALLQKVTQRLRM-------SKESDSVERKTAYLLNIFKQIDKDMTGL-LSADEFAAALGPGGLNVCAKEDDLRMVFEAMDVNEDERISYSEFIDFLNVDDIDPEYNPFYDGRR 385          
BLAST of mRNA_E-siliculosus-1a_F_contig1239.1491.1 vs. uniprot
Match: A0A7S3ZVU3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVU3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 7.940e-18
Identity = 78/254 (30.71%), Postives = 122/254 (48.03%), Query Frame = 0
Query:  223 HDRWVQRASQRLGDIATLKYGSVKDFFRMYDSNCDGVLDFDEFSEGITMCQLDHVFPRSLQRTLFDKIDTDKSGGIELDEFADFLGQSETKGPSSGEPSALQKEKTQQQADDVEARSVTLQPIQDHKVQRIKNKLAHCVQQAVPNASTGLADNRT-MFLKKQFAFLSEDAASRG---ISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNRDGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQASNAA 472
            ++R   +A +RL  +A  KYG V+  F   D N D  L  DEFS  +    L+ +FPR  QR ++D ID D S  +E++E  D+L     K P +   +    EK  +  +D     +TL P     ++ +K+++A  V +      T   + R   +L            S+G   +S   +V ALGP+ +NLGV D ++R LV  +D        +K+F   L + DH P + P FD R R +  L+ + AA
Sbjct:  170 NERVTNKARERLAQLALHKYGGVRQMFDCLDRNNDKELSLDEFSHALKRRNLEKLFPRDQQRLVYDAIDKDFSESVEVEEMVDWL----EKDPRAA-AARRANEKLLRSQEDRNIGEITLPP----HLREVKDRIADEVYKRTRATKTEEGNLRQDEYLINGLQNWDVQNRSKGDGTLSPREIVDALGPKYLNLGVPDAEVRELVDYLDLGE--QCKIKQFVKKLEIGDHAPDFNPFFDARDRELVSLKRTIAA 412          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1239.1491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FJI0_ECTSI5.840e-15596.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJI1_ECTSI1.240e-13272.59EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7R9YBQ5_9STRA3.330e-2731.20Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3ZVU3_9STRA7.940e-1830.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..183
NoneNo IPR availableGENE3D1.10.238.10coord: 168..313
e-value: 6.0E-13
score: 51.3
NoneNo IPR availableGENE3D1.10.238.10coord: 320..450
e-value: 4.8E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR10891:SF814CALCIUM-BINDING PROTEIN CML27-RELATEDcoord: 244..314
coord: 395..447
IPR002048EF-hand domainSMARTSM00054efh_1coord: 282..310
e-value: 1.9
score: 15.5
coord: 418..446
e-value: 1.2
score: 17.2
coord: 244..272
e-value: 6.2E-4
score: 29.1
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 395..443
e-value: 5.1E-7
score: 29.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 246..306
e-value: 3.9E-7
score: 30.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 240..275
score: 12.198
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 278..313
score: 10.329
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 414..449
score: 12.087
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 244..314
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 395..447
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 427..439
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 253..265
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 245..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1239contigE-siliculosus-1a_F_contig1239:565..11254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1239.1491.1mRNA_E-siliculosus-1a_F_contig1239.1491.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1239 565..11291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1239.1491.1 ID=prot_E-siliculosus-1a_F_contig1239.1491.1|Name=mRNA_E-siliculosus-1a_F_contig1239.1491.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=830bp
MFTSTRLKTALHRAGSRELEVWMEKVERELPCESTEREKGDCSITPTIRE
FVDCDRQLLREQHRLRVKGLMEDKGTNSARSGRKRTQVGSTNRSSASSPT
VVERANASIGSQRRSSGARARPMSAADEFSRRDLVNGKARETLWTSRSMP
SLGAQFPHNLSSRRKIEAERKSMAAAVDETQMESSGVSDSYMTSTQMAYT
SGLLAPPSKVPVMDPYRHRQLLHDRWVQRASQRLGDIATLKYGSVKDFFR
MYDSNCDGVLDFDEFSEGITMCQLDHVFPRSLQRTLFDKIDTDKSGGIEL
DEFADFLGQSETKGPSSGEPSALQKEKTQQQADDVEARSVTLQPIQDHKV
QRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAASRGISLEN
LVQALGPRGMNLGVNDEDLRLLVKEMDTNRDGNITVKEFAAFLNLDDHDP
LYQPLFDGRRRNVNILQASNAAMVEQAPPVESPEEEFFKARADHLHSVAV
PSKELDKAVRMERERIADEVKAKHSRGRLARPMSPAWTVGGDAVTVSTPS
GRTVEDIWDLPPPTRHLSSVKRSLTSSMRHLPRTSAMRRGKDGASTSFGS
EGGPFAEAPLQEQGEGSLSPKTSLTSLSSCHDLFSSLEEGRLQDATAGAL
ARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPL
IKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISL
SVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDK
RQFPVQNTRQAQSRGQQMHEALGGPMAIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR039647EF_hand_pair_protein_CML-like
IPR002048EF_hand_dom