mRNA_E-siliculosus-1a_F_contig1014.149.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1014.149.1
Unique NamemRNA_E-siliculosus-1a_F_contig1014.149.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: D7FLL6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL6_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 2.680e-170
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLDEFDTQEQGDVYF 844
            MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLDEFDTQEQGDVYF
Sbjct:    1 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLDEFDTQEQGDVYF 261          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: A0A836CEZ0_9STRA (ATP synthase subunit D-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEZ0_9STRA)

HSP 1 Score: 330 bits (845), Expect = 4.510e-108
Identity = 176/206 (85.44%), Postives = 188/206 (91.26%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEK 679
            MSAQ VAPTRMAL +YKGKL+GAKKGYELLKKKSDALKARFR IAKQI+ELK+ MREDA+ AFFSLTQA QY AGDFR KVLDTP PAA+R R+RTDNVAGVKLP+F  Y TG E  DNIGL+GGGQKV QCR+KYK WVENL+KLASLQTSF+TMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEK
Sbjct:    1 MSAQ-VAPTRMALTLYKGKLVGAKKGYELLKKKSDALKARFRAIAKQIYELKKQMREDASMAFFSLTQA-QYAAGDFRSKVLDTPHPAAIRVRSRTDNVAGVKLPMFTPYGTGVEVHDNIGLSGGGQKVAQCREKYKQWVENLVKLASLQTSFITMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEK 204          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: A0A7S2V1A2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1A2_9STRA)

HSP 1 Score: 259 bits (663), Expect = 8.850e-81
Identity = 148/265 (55.85%), Postives = 187/265 (70.57%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLD-TPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAA---REQALKNELAAANKLLETDEALAASAAVSGGDDTMLDEFDTQEQGDVYF 844
            MS   VAPTRMAL M+KGK +GAKKG+ELLKKKSDALKAR R+I K+I+  K+ + + A TAFFSLTQA QY AGDFR +V+D     A++R   R DNVAGVKLP+F  YE  +E K+N+GLAGGG+ +  CR K+KA++ +L++L+SLQTS++TMDEALKVTNRR NALENVTIPR+EG++SYI RELDELEREDF+RLK+V  KK+E A     + +L  E+A                        ML  +D  +  DVYF
Sbjct:    1 MSGANVAPTRMALTMFKGKRVGAKKGFELLKKKSDALKARHREIMKEIYRHKKNIADQAQTAFFSLTQA-QYAAGDFRTQVIDGCGNSASMRVHNRIDNVAGVKLPIFMEYEASTEQKENLGLAGGGRAIANCRAKFKAFLVSLVQLSSLQTSYITMDEALKVTNRRCNALENVTIPRIEGILSYIERELDELEREDFSRLKRVTSKKKEDAEDQPEQDSLDKEMA------------------------MLSNYDVADDNDVYF 240          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: W7TG62_9STRA (H-or na-translocating f-v-type and a-type atpase (F-atpase) superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG62_9STRA)

HSP 1 Score: 256 bits (655), Expect = 2.790e-79
Identity = 153/275 (55.64%), Postives = 186/275 (67.64%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAK-----DNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLD---------EFDTQEQGDVYF 844
            MS   VAPTRMAL MYK K +GAKKGYELLKKKSDALK RFR I K I   K  M +  ++AFFSLTQA QY AGDFR +VL     A+VR    TDNVAGVKLPVF  YE  SE K     DN+GLA GG+++  C++K+  ++ NL++LASLQTSF+T+DEALKVTNRRVNALENVTIPR+E +++YINRELDELEREDFTRLKKV   KR A A  +A              +EAL  +AA +G   + ++         ++DT    D+ F
Sbjct:    1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQA-QYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEA-------------AEEALHKAAAAAGARSSKIEGGLVKDVTAQYDTAGDSDIVF 261          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: F0YKB3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKB3_AURAN)

HSP 1 Score: 256 bits (653), Expect = 2.980e-79
Identity = 139/211 (65.88%), Postives = 171/211 (81.04%), Query Frame = 2
Query:   68 AQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEK--KREAA 694
            A QV PTRMALQ YKGK  GA KG++LLKKK+DALKARFR IAK+I++ K  M E  +TA+FSLT AAQY AGDF+ KVL+    A+VR   +TDN+AGVK+PVF  ++TG+E  +NIGLAGGG+K+ +C++K+   +  L+KLASLQTSFVTMDEALKVTNRRVNALENVT+PR+E  +SYI  ELDELEREDFTRLKKV ++  KR+AA
Sbjct:    2 ADQVPPTRMALQTYKGKKAGASKGHQLLKKKADALKARFRDIAKEIYKTKGTMSESCSTAYFSLT-AAQYAAGDFKTKVLEGNFVASVRVTGQTDNIAGVKIPVFRQFDTGAEHLENIGLAGGGRKIAECKEKFTNLLAVLVKLASLQTSFVTMDEALKVTNRRVNALENVTLPRIEKTLSYITSELDELEREDFTRLKKVKDQNSKRQAA 211          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: M4BRW9_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BRW9_HYAAE)

HSP 1 Score: 255 bits (651), Expect = 9.110e-79
Identity = 149/261 (57.09%), Postives = 181/261 (69.35%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLDEFDTQEQGDVYF 844
            MS+ QVAPTRMAL  +K K + AKKG+ELLKKK+DALK RF+ + ++I + K  M  +A+ AFFSLTQA QY AGDFR KV+++   A +R + R DNVAGVKLPVF   E   E  DNIGLAGGG K+  CR K++  +  LIKLASLQTSFVT+DEALKVTNRRVNAL+NVTIPR+E  ISYI+RELDELEREDF R+KKV   K+      QA K E+AA N L E        A V   D  +L +++     DV F
Sbjct:    1 MSSVQVAPTRMALTTFKTKSVSAKKGFELLKKKADALKMRFQAMLREIQKTKMSMSTEASEAFFSLTQA-QYAAGDFRNKVIESVTTAEIRTQNRIDNVAGVKLPVFTEVEVSREKSDNIGLAGGGGKIQNCRAKFRVLLRALIKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIENTISYISRELDELEREDFVRIKKVQANKQVIEKAVQAKKKEVAAKNALAEDP-----IADVVASDHDILSQYELSADADVVF 255          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: A0A7S1XVP0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVP0_9STRA)

HSP 1 Score: 255 bits (651), Expect = 4.400e-78
Identity = 142/206 (68.93%), Postives = 165/206 (80.10%), Query Frame = 2
Query:   59 TMSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYET--GSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKV 670
            TM  QQVAPTRMALQ+YKGK   A KGY+LLKKKSDALK RFR  AK+I   K  M ED+A AFFSLTQA QY AGDF+  VL+    A+VR   RTDNVAGVKLPVF SYET  G+ A +NIGLAGGG++V Q RDK+K ++  ++ LASLQTSF+T+DEALK+TNRRVNALENVTIPR+E  + YINRELDELERE+FTRLKK+
Sbjct:   56 TMGDQQVAPTRMALQLYKGKREAATKGYKLLKKKSDALKVRFRDYAKKIAANKGSMAEDSAGAFFSLTQA-QYAAGDFKLAVLEGNCTASVRIHTRTDNVAGVKLPVFSSYETADGTNASENIGLAGGGRQVQQSRDKFKEFMGKMVTLASLQTSFLTLDEALKITNRRVNALENVTIPRIEATLKYINRELDELEREEFTRLKKL 260          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: D0N597_PHYIT (H-or Na-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily n=15 Tax=Phytophthora TaxID=4783 RepID=D0N597_PHYIT)

HSP 1 Score: 248 bits (633), Expect = 5.300e-76
Identity = 145/265 (54.72%), Postives = 183/265 (69.06%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKRE----AAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLDEFDTQEQGDVYF 844
            MS+ QVAPTRMAL  +KGK +GAKKG+ELLKKK+DALK RF+ + ++I + K  M  +A+ AFFSLTQA QY AGDFR KV+++   A +R + R DNVAGVKLPVF   E   E  +NIGLAGGG K+  CR+K++  +  LIKLASLQTSFVT+DEALKVTNRRVNAL+NVTIPR+E  ISYI RELDELEREDF R+KKV   K++      ARE+       ++   ++ D      A V   D  +L +++     DV F
Sbjct:    1 MSSVQVAPTRMALTTFKGKRVGAKKGFELLKKKADALKMRFQAMLREIQKTKMSMSTEASEAFFSLTQA-QYAAGDFRNKVIESVSTAEIRTQNRIDNVAGVKLPVFTEVEVSREKSENIGLAGGGGKIQNCREKFRVLLRALIKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIEKTISYITRELDELEREDFVRIKKVQANKQDHEKAVLAREKEAAESKKSSGAAVDDDP----FADVVASDRDILAQYEPSADADVVF 260          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: A0A1V9Z1C8_9STRA (H-or Na-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z1C8_9STRA)

HSP 1 Score: 248 bits (632), Expect = 5.770e-76
Identity = 136/215 (63.26%), Postives = 165/215 (76.74%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAAREQ 706
            MS  QV PTRM L +YK K + AKKGY+LLKKK+DALK RF+ + ++I + K  M +DAA AFFSLTQA QY AGDFR KV+++   A  R   R DNVAGVKLPVF   ET  E  +NIGL+GGG K+  CRDK+++ ++ L+KLASLQTSFVT+DEALKVTNRRVNAL+NVTIPR++ VI YI+RELDELEREDF R+KKV   K EAA  +Q
Sbjct:    1 MSTVQVPPTRMNLTVYKAKRVAAKKGYDLLKKKADALKMRFQAMLREIQKTKMAMSQDAADAFFSLTQA-QYAAGDFRHKVVESVTTAEFRLENRIDNVAGVKLPVFTDVETTREKSENIGLSGGGGKIQNCRDKFRSLLKALVKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIDKVIDYISRELDELEREDFVRIKKVQANKIEAAKEQQ 214          
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Match: A0A1V9ZXX8_9STRA (H-or Na-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXX8_9STRA)

HSP 1 Score: 246 bits (627), Expect = 3.020e-75
Identity = 148/261 (56.70%), Postives = 182/261 (69.73%), Query Frame = 2
Query:   62 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLDEFDTQEQGDVYF 844
            MS  QV PTRM L +YK K + AKKG++LLKKK+DALK RF+ + ++I + K  M ++AA AFFSL+QA QY AGDFR KV+++   A  R   R DNVAGVKLPVF   ET  E  +NIGLAGGG K+  CRDK++A ++ L+KLASLQTSFVT+DEALKVTNRRVNAL+NVTIPR++ +I YI+RELDELEREDF R+KKV   K E A REQ L     AA  L E      A+A +   D  +L  F+     DV F
Sbjct:    1 MSTVQVPPTRMNLTVYKAKRVAAKKGFDLLKKKADALKMRFQNMLREIQKTKLAMSQEAADAFFSLSQA-QYAAGDFRHKVIESVTSAEFRLENRIDNVAGVKLPVFTDIETTREKSENIGLAGGGGKIQSCRDKFRALLKALVKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIDKIIDYISRELDELEREDFVRIKKVQANKIELA-REQQL-----AAEALNEQG----AAAQIQASDLDILAAFEPTADDDVVF 250          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1014.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLL6_ECTSI2.680e-170100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEZ0_9STRA4.510e-10885.44ATP synthase subunit D-domain-containing protein n... [more]
A0A7S2V1A2_9STRA8.850e-8155.85Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TG62_9STRA2.790e-7955.64H-or na-translocating f-v-type and a-type atpase (... [more]
F0YKB3_AURAN2.980e-7965.88Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
M4BRW9_HYAAE9.110e-7957.09Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A7S1XVP0_9STRA4.400e-7868.93Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
D0N597_PHYIT5.300e-7654.72H-or Na-translocating F-type, V-type and A-type AT... [more]
A0A1V9Z1C8_9STRA5.770e-7663.26H-or Na-translocating F-type, V-type and A-type AT... [more]
A0A1V9ZXX8_9STRA3.020e-7556.70H-or Na-translocating F-type, V-type and A-type AT... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1014contigE-siliculosus-1a_F_contig1014:16618..20935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size786
Model size1449
Exons6
Ec32 orthologEc-17_000670.1
Ec32 ortholog descriptionATPase, V1 complex, subunit D
Hectar predicted targeting categoryother localisation
Seed ortholog score491.9
Taxonomic scopeEukaryota
Seed eggNOG ortholog2880.D7FLL6
Seed ortholog evalue1.9e-136
BRITEko00000,ko00001,ko00002
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.C
EggNOG OGsCOG1394@1,KOG1647@2759
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
GOsGO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000325,GO:0000329,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006885,GO:0007035,GO:0008150,GO:0008324,GO:0009987,GO:0012505,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031224,GO:0032991,GO:0033176,GO:0033178,GO:0033180,GO:0034220,GO:0036442,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044769,GO:0045851,GO:0046961,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071944,GO:0090662,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1902600
KEGG ModuleM00160
KEGG Pathwayko00190,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG TC3.A.2.2
KEGG koko:K02149
Preferred nameVMA8
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1014.149.1prot_E-siliculosus-1a_F_contig1014.149.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1014 17220..20874 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927516.4311357-UTR-E-siliculosus-1a_F_contig1014:16617..172191622927516.4311357-UTR-E-siliculosus-1a_F_contig1014:16617..17219Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1014 16618..17219 -
1696318563.5482543-UTR-E-siliculosus-1a_F_contig1014:16617..172191696318563.5482543-UTR-E-siliculosus-1a_F_contig1014:16617..17219Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1014 16618..17219 -
1622927516.5313644-UTR-E-siliculosus-1a_F_contig1014:20874..209351622927516.5313644-UTR-E-siliculosus-1a_F_contig1014:20874..20935Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1014 20875..20935 -
1696318563.6337948-UTR-E-siliculosus-1a_F_contig1014:20874..209351696318563.6337948-UTR-E-siliculosus-1a_F_contig1014:20874..20935Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1014 20875..20935 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927516.4424798-CDS-E-siliculosus-1a_F_contig1014:17219..174241622927516.4424798-CDS-E-siliculosus-1a_F_contig1014:17219..17424Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 17220..17424 -
1696318563.5627968-CDS-E-siliculosus-1a_F_contig1014:17219..174241696318563.5627968-CDS-E-siliculosus-1a_F_contig1014:17219..17424Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 17220..17424 -
1622927516.4606524-CDS-E-siliculosus-1a_F_contig1014:18098..181961622927516.4606524-CDS-E-siliculosus-1a_F_contig1014:18098..18196Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 18099..18196 -
1696318563.582262-CDS-E-siliculosus-1a_F_contig1014:18098..181961696318563.582262-CDS-E-siliculosus-1a_F_contig1014:18098..18196Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 18099..18196 -
1622927516.4734592-CDS-E-siliculosus-1a_F_contig1014:18747..188851622927516.4734592-CDS-E-siliculosus-1a_F_contig1014:18747..18885Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 18748..18885 -
1696318563.6005902-CDS-E-siliculosus-1a_F_contig1014:18747..188851696318563.6005902-CDS-E-siliculosus-1a_F_contig1014:18747..18885Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 18748..18885 -
1622927516.4850745-CDS-E-siliculosus-1a_F_contig1014:19232..193371622927516.4850745-CDS-E-siliculosus-1a_F_contig1014:19232..19337Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 19233..19337 -
1696318563.6083384-CDS-E-siliculosus-1a_F_contig1014:19232..193371696318563.6083384-CDS-E-siliculosus-1a_F_contig1014:19232..19337Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 19233..19337 -
1622927516.5021052-CDS-E-siliculosus-1a_F_contig1014:20190..203161622927516.5021052-CDS-E-siliculosus-1a_F_contig1014:20190..20316Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 20191..20316 -
1696318563.6163015-CDS-E-siliculosus-1a_F_contig1014:20190..203161696318563.6163015-CDS-E-siliculosus-1a_F_contig1014:20190..20316Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 20191..20316 -
1622927516.5195367-CDS-E-siliculosus-1a_F_contig1014:20760..208741622927516.5195367-CDS-E-siliculosus-1a_F_contig1014:20760..20874Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 20761..20874 -
1696318563.6250632-CDS-E-siliculosus-1a_F_contig1014:20760..208741696318563.6250632-CDS-E-siliculosus-1a_F_contig1014:20760..20874Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1014 20761..20874 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1014.149.1

>prot_E-siliculosus-1a_F_contig1014.149.1 ID=prot_E-siliculosus-1a_F_contig1014.149.1|Name=mRNA_E-siliculosus-1a_F_contig1014.149.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=262bp
MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHE
LKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVA
GVKLPVFESYETGSEAKDNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQ
TSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRL
KKVVEKKREAAAREQALKNELAAANKLLETDEALAASAAVSGGDDTMLDE
FDTQEQGDVYF*
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mRNA from alignment at E-siliculosus-1a_F_contig1014:16618..20935-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1014.149.1 ID=mRNA_E-siliculosus-1a_F_contig1014.149.1|Name=mRNA_E-siliculosus-1a_F_contig1014.149.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4318bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:16618..20935- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTGCAGCAGAGCACTGCTCATTGCTCCAGCGACGCTGTACGCGTAGAAA CAGCAGCCACCATGTCCGCCCAACAGGTGGCGCCGACGCGCATGGCGCTC CAGATGTACAAGGGGAAGCTTCTGGGCGCGAAGAAGGGCTACGAGCTTCT CAAGAAGAAGTCCGATGCGCTAAAGGTGAGTTCAGACCTAGCGAGTGCCT CTCGCTAGCTGCTGTGCCCTTCTGTTGGCACTGCCTGCAGCGCACTGGCA GTGTCCCGTAGGATGAGGGTCATAGAGCTGAGCAGACATCTGCTGGCTGG ATAGGGTCGCGTCTCTCGTTGAGACGACCAATGTGTTGGCTGTGACCCCT GCCCAGAATGAGACTGTTCCGCGCAAAGCTGAGTTCTTGAAAGGAGGGTG GTGCATGGGTATTCAGTTCGATCTCGGTTTTGATGCGGAGAGCTCTATTT AGCACGCAGAGTGCGTTGTACATTGTACTTGATGACCCGACGCTCTGCTT TGTTTGTCTCACCCGATCAGACGGAAAACTGAAGCCGCTCGCATGAATGC CGTCGTTACTGTCTGCCTCTGTGTAAAACTTCTCCATTTTTCTTGTGTTG CTCCCCCCAAATCGGCCAGGCCCGATTCCGCAAAATCGCCAAACAAATCC ACGAGCTGAAGCAGGTGATGCGTGAAGACGCCGCCACCGCGTTCTTTTCG CTCACCCAAGCGGCGCAGTATGTCGCAGGAGACTTCCGTGGGAAGGTACG GGGTTAATCGCCACGCTTGTGGTGCCTACCCCGATGCGACGGCGTACGTA GCCTGGCGGGTTCCATTGCACTACTATGTAGCAGACTTTGGTGGACGATG TAGTCCTGCAACAGCGGCTGACGAATAATCCTGCAACAGCGGCTGACTTG GGGAAGTGGTACAGCAGTTGTACTGTAGGCCAGTCCGTGTTTATCGCGTA GAAGGCAGAAGAGGGGGCGGTAAGAGCTTTCAGCGACTTGTACTTGCGTA ATTCAAGTGTACGGCGAAAGGGGACCCTGGAATTGGTGTTACCCCTTGAG TACAGCCAAAGCTGTCTCGGGATCCAACAGTTGACACATTAATCGCCTGT CTTCTGGTCACTTGCTTCTCAACGTTGTCGAAACGAGGTTACTGAACATC GGCTTAAAAACGAAGTGTTTGCGTACCTTCTGCTACAAGCGGATGCCTCT TCGGGTTGAAATATTCCAATCGCCGTCGGACGTTCTTGTTGGTGATTGCC ATGACTTGCAACACCTCGCCTGACCATCTATCCTAGGCAATTCAAGTTGA TACCATGTCCATTGACGTTGAAACATCAAGGTTCGCTCTGCTGGTATCAG ATGACCAGGCACCAGTTGATCTTGTACCGCTGGTATGGAAAACAGGCTCT CTCCGATATCGAGGAAAGTAGCATGTACACCCACAGCACCACCCTGCACG CTTCCACCGCATGAAGTCTTCCCCCCTCTGCAACATGTGGGATAATAACC GTCGCTGTTGCATATGCTGCGCGTCTCGTGCTGCTGCTGCTGCTTGCTGC TGCTGCTTCCATGGCGGTGGCTCTCCTCGGGGATGGCTCAACGGATAGGT GCTGGACACTCCACGGCCAGCGGCCGTGCGGTGCAGGGCTAGGACAGACA ACGTAGCGGGCGTGAAGCTTCCGGTGTTCGAGTCGTACGAGACCGGGTCG GAGGTTCGTATGGTCTCGGTTTGTTGCTGCACGCATTGGTGTTCTAGCCT CCTTCCTTGTACAGGTGTACTCTTGTACTTACAGAACCCGAGGCTCGCTC GTCGAGGTTTCAGGTGCACTCAAGACCGCGCTATCGTTGAGTTCCATCGA AGCGGCTAAGGTTCTAGCGATTGCTTCTTACTCGTTGATCCAGTTAGACG CAGATGGTGTAACCTCATCGGCTCTGCGATCTTTTCTCACGCCCCACGCC CCCCTTGCGCGCCGGCAATCTATTTCGTTCTCTTTCATGTTTTTTTTGTC CTTTGCGTTGCGGACACGGCTTCGGACCGCCTCCGTGAACACCGCGCCAG GCCAAGGATAACATCGGTCTAGCCGGGGGTGGGCAGAAGGTGGGACAGTG CCGCGACAAGTACAAGGCCTGGGTGGAGAACCTCATCAAGCTGGCGTCCC TGCAGACGTCGTTTGTCACCATGGACGAGGCGCTCAAGGTGCGGGTCACC TAGAACTGTACCATACGTTCAGTGGGTTTTGGGTGATGATCCGGTTCCCC GTGTTTGCTGTGTTGACCGCGGTGTTTGGTCGGTACGGTAACGGTGCTTT GCTTTTTCACGTCCTGGTGGCTCCCTTTTGCATCCTTCGGTTTGCCATCA CTCGGCTAAGCTGTATCCTGGGGCCAGCGCTTCCTTGTTTTTGATCGTTT CGAGAGGCAAAAAACGAACGGGATTGCAGTACCGACATTGTAGGTCTTAG GCTGAAATAGAAGGAAGCATCTGCTCGGTTTGTTTCTTTCTTGGCTAAGG AGATTGTTGTGCGTTTTTCGGAGAGAAGGGATGGTGTGCTGGGCTGTTCT ACCTATCCTTGCACTCGCGTTGGTCGGATGTTGGAGGACGGGACCCCTTG ACCTGTGTTGTGTTGTGCTTGGTTGTGCGCTCTACGGAGATCCAAGGTCT GCTCTAGTAGTAGATCTAGTTGTACCCCCCGCCGGGATATTTCTTTCTCT TTGGTCATTGATCCCTCCTTCTCCCCCAAACGGTGGCAGGTAACGAACCG CCGCGTTAACGCGCTGGAAAACGTGACGATCCCGCGAATGGAGGGAGTGA TCAGCTACATCAACAGGGAGCTGGACGAGCTGGAGAGGTAATGCCAGCAA TATTTTTTCGTTGGTTGCTTCATGCTACGTGTGGGGACAGCAGTACAGAA ACGTATGCGTGGGTGTTTGTTGTTGCTGAAGGTTTCGTCATGTCTTTTGC CCCGCTCGACAACAACGGTCGGTAGTCTGCTGCTCGCACAACAACCCAAC CCTCGATTAGTAGAATGTGTGATAGTGTCGATGCTAGGGCTTCCAGACCC TGTAGTCCACATGGGTAGTGCAGAGAGCACGACGCTACAGTATTGGGCCG TGCATGGTGCATTTTCCCGCTCTTGGCGTGGCGAGGGTAGGGTAGGGCAT GCCTCTTCCCGTGATGACGCGGTCCTTGGTACGGAAAATCGAGCGAAGAC TGCTTCCGCCTATCGTTTCTGTACTGGTACGTAAACACCATCTTCTGCCG AATCGTGTACTCTTGCCACATGCGTTGACCAGGTTGGAATGGACGGAATT CTTCCTGTTTGTATCACAACCAGCACATGACGACGTTCGGCGTCAGTGAT AGTCACCGTTGACGTTGAAACTGATTATTCTTGTTGGAAAAGATTCCGGT TTACTTGGACCTGTTTGACGTAGCCCACCACCACTGTTTTCTCCGTCCGG TAGCGTCATGTCTTTCCTTGATGGACTTTCGCGTTTGCATCTTGGGCGAC AACAATCCCAGGGAGGACTTCACTCGGCTGAAGAAGGTGGTGGAGAAGAA GCGCGAGGCGGCAGCTAGGGAGCAGGCACTCAAGAACGAGTTGGCGGCCG CGAACAAGCTTCTCGAGACGGACGAAGCGCTCGCCGCTTCCGCCGCCGTC AGCGGGGGAGACGACACGATGTTAGACGAGTTCGACACGCAAGAGCAGGG AGACGTCTACTTCTGACGTTGTTTTCTTCCGTGAACGTAGCTTTGAGCGC GAGACAGACCCAACGGGTCGTTTTTTTCGTATGTTGGCTGCGTGCAGCTC GAAGCATCCGCAACGGCGTCGGCGCGTCCTCTCCTCGGTAGTCTTCGATA GGTATCATTGTTGGGAATTGTTGATGCTGACTATTTTGGACCTATGATGC TATGTTCATGTATTTTTTGTATTGCTAAACAGGTAACTTCACGCGGATGT TTGGTATGCAGGCGGTGCGAGTTGTTTTTTGTAAGGGGGCAGATGTTTGC AGCGAGGATAGCCAGGGATGACCGCGGTAGCATACCCCTGCCAACTTTTG AACGTTTTTTCGCCCGATTTTGATGAACAAGGCAAAGTCGCCATCCAACC ATGTCTGAAGTGTACATGCATTGACGGTGATATGGAACAATGAACGCCGT ACGTCATACTGTGTAAGGACCTGGACTGTATCATGGATGGACTTGCTGAC GCCCATGACTACTCCGTTTTGGGTTGCCCCATTTGATGATAGTATTGACT GTTGTTCCGCCCGATGGCAAGGCCCGGTCCCACGCTAATATTGCCACGAC AATGGACGCATGATGGTA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1014:16618..20935-

>mRNA_E-siliculosus-1a_F_contig1014.149.1 ID=mRNA_E-siliculosus-1a_F_contig1014.149.1|Name=mRNA_E-siliculosus-1a_F_contig1014.149.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:16618..20935- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCCGCCCAACAGGTGGCGCCGACGCGCATGGCGCTCCAGATGTACAA
GGGGAAGCTTCTGGGCGCGAAGAAGGGCTACGAGCTTCTCAAGAAGAAGT
CCGATGCGCTAAAGATGTCCGCCCAACAGGTGGCGCCGACGCGCATGGCG
CTCCAGATGTACAAGGGGAAGCTTCTGGGCGCGAAGAAGGGCTACGAGCT
TCTCAAGAAGAAGTCCGATGCGCTAAAGGCCCGATTCCGCAAAATCGCCA
AACAAATCCACGAGCTGAAGCAGGTGATGCGTGAAGACGCCGCCACCGCG
TTCTTTTCGCTCACCCAAGCGGCGCAGTATGTCGCAGGAGACTTCCGTGG
GAAGGCCCGATTCCGCAAAATCGCCAAACAAATCCACGAGCTGAAGCAGG
TGATGCGTGAAGACGCCGCCACCGCGTTCTTTTCGCTCACCCAAGCGGCG
CAGTATGTCGCAGGAGACTTCCGTGGGAAGGTGCTGGACACTCCACGGCC
AGCGGCCGTGCGGTGCAGGGCTAGGACAGACAACGTAGCGGGCGTGAAGC
TTCCGGTGTTCGAGTCGTACGAGACCGGGTCGGAGGTGCTGGACACTCCA
CGGCCAGCGGCCGTGCGGTGCAGGGCTAGGACAGACAACGTAGCGGGCGT
GAAGCTTCCGGTGTTCGAGTCGTACGAGACCGGGTCGGAGGCCAAGGATA
ACATCGGTCTAGCCGGGGGTGGGCAGAAGGTGGGACAGTGCCGCGACAAG
TACAAGGCCTGGGTGGAGAACCTCATCAAGCTGGCGTCCCTGCAGACGTC
GTTTGTCACCATGGACGAGGCGCTCAAGGCCAAGGATAACATCGGTCTAG
CCGGGGGTGGGCAGAAGGTGGGACAGTGCCGCGACAAGTACAAGGCCTGG
GTGGAGAACCTCATCAAGCTGGCGTCCCTGCAGACGTCGTTTGTCACCAT
GGACGAGGCGCTCAAGGTAACGAACCGCCGCGTTAACGCGCTGGAAAACG
TGACGATCCCGCGAATGGAGGGAGTGATCAGCTACATCAACAGGGAGCTG
GACGAGCTGGAGAGGTAACGAACCGCCGCGTTAACGCGCTGGAAAACGTG
ACGATCCCGCGAATGGAGGGAGTGATCAGCTACATCAACAGGGAGCTGGA
CGAGCTGGAGAGGGAGGACTTCACTCGGCTGAAGAAGGTGGTGGAGAAGA
AGCGCGAGGCGGCAGCTAGGGAGCAGGCACTCAAGAACGAGTTGGCGGCC
GCGAACAAGCTTCTCGAGACGGACGAAGCGCTCGCCGCTTCCGCCGCCGT
CAGCGGGGGAGACGACACGATGTTAGACGAGTTCGACACGCAAGAGCAGG
GAGACGTCTACTTCTGAGGAGGACTTCACTCGGCTGAAGAAGGTGGTGGA
GAAGAAGCGCGAGGCGGCAGCTAGGGAGCAGGCACTCAAGAACGAGTTGG
CGGCCGCGAACAAGCTTCTCGAGACGGACGAAGCGCTCGCCGCTTCCGCC
GCCGTCAGCGGGGGAGACGACACGATGTTAGACGAGTTCGACACGCAAGA
GCAGGGAGACGTCTACTTCTGA
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